Conger conger (European conger): 133105539
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Entry
133105539 CDS
T10633
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ccog Conger conger (European conger)
Pathway
ccog03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133105539 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133105539 (nup54)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133105539 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
133105539
NCBI-ProteinID:
XP_061071685
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All DBs
Position
12:42430755..42446666
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AA seq
611 aa
AA seq
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MAFNFGGGATNTASSSGFSFGSFAAKTTASTGFGFGTTTTTTATSSGFGSLAAPGFGAAT
TTAPSTGFGFGATATGFGGLGPASTTSGGFSFGGFGLNSNAAALSFNVGNFGASTSAATV
FSFGNSLGSAGAFGGFGTATTSAAPGSSFSFAAPSNTGGLFGNTQNKGFGFSSLGPGTTA
ATGFGTGLGTGLGFGFNLQPQQQQGGLFGQQAQLPAQSNQLINTASALSAPTLLGDERDA
ILAKWNQLQAFWGTGKGYFNSNIPPVEFTQENPFCRFKAVGYCCAPGCKDEDGLVVLALN
KKEVDVRAQQQQLVESLHKVLGGHQILTVNVEGVKALPDDQTEVIIYVVERSLNGTSKRI
PATTLFSYVEQINIKTQLQQLGVVMSVARTELSPAQHKQLLQNAPAGVDPIIWEQAKVDN
PDPEKLIPVPMVGFKELLRRLKIQDQMTKQHQTRVDIISNDISELQKNQATTVAKIAQYK
RKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMS
QIRMQNHFGAVRSEERYSVDAELLREIKQHLKQQQEGLSHLIGVVKDDVEDIKLIEHGLH
DNVHIRGGLLS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaactttggcggtggtgctaccaatactgcaagctcttcgggattttcattt
ggttcatttgctgccaaaacaacagcctctactggttttggctttggcaccaccaccacc
accaccgccacttcatctggatttggtagtcttgcggcgcctgggtttggggctgccacc
acgacggctccctctactggctttggcttcggcgccacggcaacaggatttggggggctg
ggacccgccagcaccacctctggtgggtttagttttgggggttttggattaaattcgaat
gcggcagctctcagctttaatgtgggcaattttggggcatccaccagtgcagccacagtt
ttcagttttgggaatagcctgggtagcgcaggtgcgttcggaggctttgggacggccact
acctctgctgccccggggtcttctttcagtttcgctgctccctcaaacacagggggtctg
tttggaaacactcagaataagggctttggcttctcgagtctggggcctggtaccactgcc
gcgacgggctttggcaccggcctcggaactggcctagggtttgggttcaacctccagccc
caacaacaacaggggggattattcgggcagcaggcccagttgcctgcccagtccaaccag
ctgatcaacacggccagcgccctgtctgcacccactctgctgggggacgagcgtgatgcc
atcctggccaagtggaaccagctccaggccttctggggcacgggcaagggctacttcaac
agcaacatcccgcctgtcgagttcacccaggagaaccccttctgcaggttcaaggcggtg
gggtactgctgtgccccgggctgtaaggacgaggacggcctggtggttctggctctgaat
aagaaggaggtggacgtgcgggctcagcagcagcagctggtggagtctctgcacaaggtg
ctgggaggtcaccagatcctcaccgtcaacgtggagggggtcaaagccctgcccgacgac
cagacggaggtgatcatatacgtggtggagcgctccctgaacggcacctccaagaggatt
cccgccaccacgctcttcagctacgtggagcagatcaacatcaagacgcagctgcagcag
ctgggcgtggtcatgtccgtcgcccgcactgagctctcgcctgcacagcacaagcagctg
ctgcagaacgcacccgccggtgtggatccaattatatgggaacaggcgaaggttgacaac
cccgatcctgaaaagttgattccagttccgatggtcggttttaaagaactactgcgcaga
ctcaagatccaggaccagatgaccaagcagcaccagacgcgtgttgatataatctccaac
gacataagtgaattacagaagaatcaggctacgacggtggccaagatcgcacagtacaag
aggaagctgatggacctttctcacagagtgctacaggtgctgattaagcaggagatccag
aggaagagtggatacgccatccaggtggatgaggaacacctgcgggttcagctggacacc
atccagtccgagctcaacgcccccacacagtttaagggccgtctgaacgagctcatgtct
cagatccggatgcagaaccacttcggggcggtccggtccgaggagcgctacagtgtggac
gccgagctgctgcgtgagatcaagcagcacctgaagcagcagcaggaggggctgagccac
ctgatcggcgtcgtcaaggacgacgtggaggacatcaagctgatcgagcacggtctccac
gacaacgtgcacattaggggcggcctcctcagctga
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