KEGG   Conger conger (European conger): 133105539
Entry
133105539         CDS       T10633                                 
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
ccog  Conger conger (European conger)
Pathway
ccog03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccog00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133105539 (nup54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccog03019]
    133105539 (nup54)
Messenger RNA biogenesis [BR:ccog03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     133105539 (nup54)
SSDB
Motif
Pfam: Nup54 Nup54_C
Other DBs
NCBI-GeneID: 133105539
NCBI-ProteinID: XP_061071685
LinkDB
Position
12:42430755..42446666
AA seq 611 aa
MAFNFGGGATNTASSSGFSFGSFAAKTTASTGFGFGTTTTTTATSSGFGSLAAPGFGAAT
TTAPSTGFGFGATATGFGGLGPASTTSGGFSFGGFGLNSNAAALSFNVGNFGASTSAATV
FSFGNSLGSAGAFGGFGTATTSAAPGSSFSFAAPSNTGGLFGNTQNKGFGFSSLGPGTTA
ATGFGTGLGTGLGFGFNLQPQQQQGGLFGQQAQLPAQSNQLINTASALSAPTLLGDERDA
ILAKWNQLQAFWGTGKGYFNSNIPPVEFTQENPFCRFKAVGYCCAPGCKDEDGLVVLALN
KKEVDVRAQQQQLVESLHKVLGGHQILTVNVEGVKALPDDQTEVIIYVVERSLNGTSKRI
PATTLFSYVEQINIKTQLQQLGVVMSVARTELSPAQHKQLLQNAPAGVDPIIWEQAKVDN
PDPEKLIPVPMVGFKELLRRLKIQDQMTKQHQTRVDIISNDISELQKNQATTVAKIAQYK
RKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMS
QIRMQNHFGAVRSEERYSVDAELLREIKQHLKQQQEGLSHLIGVVKDDVEDIKLIEHGLH
DNVHIRGGLLS
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggcgttcaactttggcggtggtgctaccaatactgcaagctcttcgggattttcattt
ggttcatttgctgccaaaacaacagcctctactggttttggctttggcaccaccaccacc
accaccgccacttcatctggatttggtagtcttgcggcgcctgggtttggggctgccacc
acgacggctccctctactggctttggcttcggcgccacggcaacaggatttggggggctg
ggacccgccagcaccacctctggtgggtttagttttgggggttttggattaaattcgaat
gcggcagctctcagctttaatgtgggcaattttggggcatccaccagtgcagccacagtt
ttcagttttgggaatagcctgggtagcgcaggtgcgttcggaggctttgggacggccact
acctctgctgccccggggtcttctttcagtttcgctgctccctcaaacacagggggtctg
tttggaaacactcagaataagggctttggcttctcgagtctggggcctggtaccactgcc
gcgacgggctttggcaccggcctcggaactggcctagggtttgggttcaacctccagccc
caacaacaacaggggggattattcgggcagcaggcccagttgcctgcccagtccaaccag
ctgatcaacacggccagcgccctgtctgcacccactctgctgggggacgagcgtgatgcc
atcctggccaagtggaaccagctccaggccttctggggcacgggcaagggctacttcaac
agcaacatcccgcctgtcgagttcacccaggagaaccccttctgcaggttcaaggcggtg
gggtactgctgtgccccgggctgtaaggacgaggacggcctggtggttctggctctgaat
aagaaggaggtggacgtgcgggctcagcagcagcagctggtggagtctctgcacaaggtg
ctgggaggtcaccagatcctcaccgtcaacgtggagggggtcaaagccctgcccgacgac
cagacggaggtgatcatatacgtggtggagcgctccctgaacggcacctccaagaggatt
cccgccaccacgctcttcagctacgtggagcagatcaacatcaagacgcagctgcagcag
ctgggcgtggtcatgtccgtcgcccgcactgagctctcgcctgcacagcacaagcagctg
ctgcagaacgcacccgccggtgtggatccaattatatgggaacaggcgaaggttgacaac
cccgatcctgaaaagttgattccagttccgatggtcggttttaaagaactactgcgcaga
ctcaagatccaggaccagatgaccaagcagcaccagacgcgtgttgatataatctccaac
gacataagtgaattacagaagaatcaggctacgacggtggccaagatcgcacagtacaag
aggaagctgatggacctttctcacagagtgctacaggtgctgattaagcaggagatccag
aggaagagtggatacgccatccaggtggatgaggaacacctgcgggttcagctggacacc
atccagtccgagctcaacgcccccacacagtttaagggccgtctgaacgagctcatgtct
cagatccggatgcagaaccacttcggggcggtccggtccgaggagcgctacagtgtggac
gccgagctgctgcgtgagatcaagcagcacctgaagcagcagcaggaggggctgagccac
ctgatcggcgtcgtcaaggacgacgtggaggacatcaagctgatcgagcacggtctccac
gacaacgtgcacattaggggcggcctcctcagctga

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