Conger conger (European conger): 133105585
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Entry
133105585 CDS
T10633
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ccog Conger conger (European conger)
Pathway
ccog03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133105585 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccog03041
]
133105585 (prpf4)
Spliceosome [BR:
ccog03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133105585 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD_LRWD1
WD40_like
Beta-prop_WDR11_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
133105585
NCBI-ProteinID:
XP_061071762
LinkDB
All DBs
Position
12:9103894..9115012
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AA seq
507 aa
AA seq
DB search
MSDDEDIPVPKRSRIFYGSLEEKERERLAREGSASSSKEAVKAGIEAGNINISSGECMEM
EERVSERQAEVLAEFERRKRARQITVSTDDAEVKACLRALGEPITLFGEGPAERRERLRN
ILSVVGPDALKKSKKEDERGKRSQEECQQTWYHEGATTLKEARLWLARYSLPRAVKRLDA
ARAQKEIPESSRTVRQQELHKTLRGLNNFCSQIGDERPISSCQFSPNSKLLVTASWSGLC
KLWAVPDCSLVRTLRGHNTNVGAITFHPQATLSLDTADVNMASCAGDGSVKLWSLDSDEP
VADIEGHAMRVARVAWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVHDLHFHP
DGSLAGTGGLDAFGRIWDLRTGRCVMFLEGHLKEIYAIDFSPNGFHVATGSGDNTCKVWD
LRQRRCIYTIPAHQNLLSSVKFQPTDGHYLLTGAYDNTAKVWTHPGWSPLKTLAGHEGKV
MGLDVSADGQLIATCSYDRTFKLWVSE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgatgaggacatccccgtgccgaagaggagccggatcttctatggcagcctg
gaggagaaggagcgggagcggctggcccgggagggctcggcgagctccagcaaagaggcg
gtgaaggccgggatcgaggccggcaacatcaacatctccagcggcgaatgcatggagatg
gaggagcgcgttagcgaacggcaggcggaggtgctggccgagtttgagcgcagaaagcgg
gcgcggcagatcaccgtctccacggacgacgccgaggtgaaggcctgtctgcgggctctg
ggcgagccaatcacactcttcggggaggggcctgccgagaggcgcgagaggttgaggaac
atcttgtctgtggtggggccagacgccctcaagaagtccaaaaaggaggacgagagaggg
aaacgctctcaagaagagtgccagcagacctggtaccatgagggcgccaccactttaaag
gaagctcgtctgtggttggctcgctactccctgcccagggctgtgaagaggctggatgcc
gctcgagctcagaaggagattccggaatcttcccggaccgtgcgtcagcaggagctccac
aagacgctgagggggctgaataacttctgcagtcagatcggggacgagagacccatctcc
tcctgccagttcagccccaactccaaactgctggtgaccgcatcctggagtggtctctgt
aagctctgggcggtccctgactgtagccttgtccgcactctaaggggacacaacaccaac
gtgggggccatcacgttccacccccaggccaccctgtctctggacacggccgatgtcaac
atggcctcctgcgctggtgacgggtccgtcaagctctggagtctggacagtgacgagccg
gtggcggatatcgaggggcacgccatgcgggtggcgcgtgtagcctggcacccttccgga
cgcttcctgggcaccacctgctacgatcactcgtggagactgtgggacctggaggctcag
gaggagatcctgcaccaggagggccacagcaagggggtgcacgacctgcacttccacccc
gacggctccctggcagggaccgggggtctggatgctttcggccggatctgggatctgagg
acaggtcgctgtgtcatgttcctggagggccacctgaaggagatctacgccatcgacttc
tcccccaacggctttcatgtggccacaggaagtggagataacacctgcaaggtgtgggac
ctccgtcagaggaggtgcatctacaccatcccggctcaccagaacctcctgtcctctgtg
aagttccaacccaccgacgggcactacctgctcacgggggcgtacgataacacggccaag
gtgtggacgcaccccggctggtccccgctgaagacgctggcagggcacgaggggaaggtg
atgggcttggacgtgtcggctgacggacagctcatcgccacctgctcctacgaccgcacc
ttcaagctctgggtctccgagtga
DBGET
integrated database retrieval system
