Conger conger (European conger): 133106134
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Entry
133106134 CDS
T10633
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ccog Conger conger (European conger)
Pathway
ccog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133106134 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133106134 (cnot3a)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133106134 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133106134 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
133106134
NCBI-ProteinID:
XP_061071991
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Position
1:77584293..77594438
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AA seq
936 aa
AA seq
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MADKRKLQGEIDRCLKKVTEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVDNRKLIETQMERFKVVERETKTKAYSKEGLGLALKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKQFIEKHRYHI
CRLETILRMLDNDSVQVDLIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPPPLVG
NSQMEDEIFPHSGSTPNSTTSSSPIPPSAPCTAENSEDDKKRGRSTDSEVSQSPVKNGNP
SSSLSSSSSSSSGTSSSSLVSMATVAGGGGGNSLLGSLGGLLPSPGSFSTAIQQQQQSQP
QSQQQQPQPKNSPSSALPSNSNPSPANVLLPTPAASSPPSSSTPASVSQNSQPQTPSGQS
SASSLGLGQGLGLGKGMVTGTSGVNQMSSLGLSGMPASLSTMAGLLSGSTPAPYAQAAAS
GGVGSGVGASAVGNNSNAISSAAITSGNNNGSGTSTGLLGTSPGLGGVGGGILGLSTGQA
VIQGQPQVALSPVGMPPGAAVGVMGGSAGNTGAGGGLGGGSGALVRPPSGQKQNGSTSYS
AVVADSAPDSTLTIASQSQNSQLSSLVPAANPPKDNGPSLLGSITLPPSSPSPSYSEGKP
GSGSLMNGPLSYTQASDSMKLATDLRQILMESRAGPQLGEQPGPSAASTNTRKRKQCQAP
EPLSSLKSMAERAALGSGLEGEIPALHLTERDIFSGSTAPPGPPAAPQPSVSEVSIPPSL
GVCPLGPVPLSKDQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHS
DSVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITD
EFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagaaaactgcaaggtgaaatagatcgatgtttgaaaaaagtcacagag
ggtgtagaacaatttgaagacatttggcaaaagctccataatgcagccaatgcaaaccag
aaggaaaaatatgaggcagacctcaagaaagagattaaaaaattgcagcgtcttcgagac
cagataaagacatgggtggcctccaatgaaatcaaagacaaaaggcagctagtggacaat
cgaaaactcattgaaacgcaaatggagcggtttaaagtagtggagcgggagacaaagaca
aaggcctactccaaagaggggctgggcctggcactgaaggtggaccctgcccagaaggag
aaggaggaggtcggccagtggctaacgaacacgatagatacgctaaacatgcaggtggac
cagtttgagagtgaggtggaatcactctctgtccaaacccgtaaaaagaaaggagacaaa
gagaagcaggaccggatagaggagctgaagcaattcattgaaaagcacaggtaccacatc
tgcaggctggagaccattctgcgcatgctggacaacgactctgtgcaggtggatttgatc
cgcaagatcaaggacgatgtggagtactacctcgactcctcccaggacccagactttgag
gagaatgagttcctctacgatgacctagacctggaggacatccccccaccgctggtgggc
aactctcaaatggaggatgagatcttcccccactctgggagcacacccaactccaccacc
tcctcctctcccatacctccctctgctccgtgcactgcggagaattctgaagatgataag
aaaaggggacggtccacagacagtgaagtcagtcagtctcctgtaaagaatggcaatccc
tcatcgtcactgtcttcatcctcctcttcctcctctgggacttcgtcctcttcgctcgtc
tccatggcgacagttgcagggggtggtggtggcaacagtctccttggcagcttggggggt
ctcctccccagtcctggcagcttcagcacagcaatccagcagcagcagcagtctcagcca
cagagccagcagcagcaaccccagcctaaaaactctcccagctctgcccttccctccaac
agcaaccccagtccagcaaacgtcctcctccccacacctgctgcctcttctcctcccagc
tccagtacaccggcttcggtatcccagaattctcagccccagaccccctcagggcagtcc
tcagcctccagcctgggcctggggcagggcctgggtttgggcaaaggcatggttactgga
acgagcggtgtcaaccagatgtctagcttgggtctgtctgggatgccggcatccctcagc
accatggctggcctcctttcaggctccacccccgccccgtacgcacaggcagctgcttca
ggtggggtgggcagtggagtgggagcgtcggccgtgggtaataacagtaatgcaatatcc
agcgctgctataacgagtggcaataataacggaagcgggacatctacgggtttgttgggc
accagtcccggacttggcggagtcggtggtgggattttggggctaagcacaggtcaggcc
gtcatccagggacaacctcaggtggctctcagtccagtgggcatgccgccgggcgctgca
gttggggttatgggaggcagtgctggaaacaccggggcaggcggaggattaggaggtggg
agcggtgccctggtcagacctcccagtggacagaagcagaatggcagcactagttacagt
gcggtagttgcagacagcgcgcctgattccaccctcaccattgccagccaatcacaaaac
agccagctctcttccttggtccctgctgccaatcctcctaaggacaacggccccagcctc
ctgggttccatcacactgcctcccagctccccctccccctcgtacagcgaaggcaagccg
ggcagcgggagcctgatgaacgggcctctctcctacacgcaggcctccgacagcatgaag
ctcgccacagacctccgtcagatactgatggaatcgagggctggaccacagctaggagag
cagcctggacccagtgcagcatccacaaacacacgaaagagaaaacagtgtcaggcccct
gagcccctgagctctctgaagtccatggcagagagggcagcactgggctcaggtctggaa
ggagagattcctgccctacacctcacagaaagagacatcttctctggatcgacagcccca
ccagggcctccagcagccccccagccttccgtatccgaggtcagcatcccgccctcactg
ggcgtgtgtcctcttgggcccgtgcccctgtccaaagaccagctctaccagcaggccatg
caggagtcggcctggacgcacatgccccacccctctgactcggagaggatcaggcagtac
ctgatgagaaatccgtgtcccaccttacctttccatcaccaggtgccccctcctcactct
gattctgtggagttctaccagaggctgtccacagagaccctcttctttatattctactac
ctggagggcacgaaggcgcagtatttggcagctaaagccttgaagaagcagtcatggcgg
ttccacacaaagtacatgatgtggttccagaggcacgaggagcctaaaaccatcacagat
gagtttgagcagggaacctacatttactttgactatgagaaatggggccagaggaagaag
gaaggattcacgtttgagtacaggtacctcgaagaccgggatctacagtga
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