Conger conger (European conger): 133107420
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Entry
133107420 CDS
T10633
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133107420 (trim71)
04121 Ubiquitin system [BR:
ccog04121
]
133107420 (trim71)
Enzymes [BR:
ccog01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133107420 (trim71)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133107420 (trim71)
Ubiquitin system [BR:
ccog04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133107420 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
zf-B_box_Trim66
zf-C3HC4
zf-RING_5
Invasin_D3
DUF4094
Motif
Other DBs
NCBI-GeneID:
133107420
NCBI-ProteinID:
XP_061072396
LinkDB
All DBs
Position
1:64838983..64863047
Genome browser
AA seq
810 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSTPISSNSSTSSSSSHTSSCSTSSYRRLHALPCLHAFCR
QCLEGQRSPGDPLKLRCPTCDQKASISESGVDALPSSNFLFGNLLDVVVSSEEQNKTRGR
SHPHGGLLQPHHLGEPQCSSCDEGNPATSHCLDCQEYLCDNCMRAHQRVRLTKDHFIERL
LERLHLTSRTNISNTPVSLAQSYHSNYSLLPIFPDRTRYCQQHDNEVFRFFCDSCSVPIC
RECSVGLHMGHSFIYLQEAVQDSRAITIQLLSDAQQGRQAIQLSIEKAQAIAEQVEIKAK
VVQSEVKAITLRHKKALEERECELLWKVEKIRQVKAKALYLQVEKLHLNLSQLDSTIASV
QQALEEGRSMEILLARERMLTQIQDLKALRGVLQPQEDDRIMFTAPDQALLIAINSMGFI
SSGAFAPVTKATGDGLKRALQGKVASFTVVGYDHDGEPRLSGGDGISAVVMSPDGTLSTA
DVTDHQNGTYSVSYLPKMEGEHLVSVLLCSQHIDGSPFKVPVKSGRSYGGVGLPVASFGA
EGDGDGQLCRPWGICVDREGYVVVADRSNNRVQIFKPCGTFHLKFGTLGSRPGQFDRPAG
VACNPQRRIIVADKDNHRIQVFTFEGQFLLKFGEKGSKNGQFNYPWDVAVNSEGKILVSD
TRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDC
QSARFLGSEGTANGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTQGNGF
GQMDRPSGIAITPDGMIIAVDFGNNRILVF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttcctgactccgatcttcagacgtgtcctctttgtaaggaattgtgtggc
tcctctactcctatatcgtccaactcgtctacctcatcatcttcgtctcatacctcgagc
tgctctacctcatcttacagaaggctccacgctctcccctgtctccacgccttctgtagg
cagtgcctggaagggcaacggagtcctggcgaccccttgaaacttcggtgcccaacttgt
gaccaaaaagcctccatctccgaatccggagtggacgcattgccatcgtcgaatttcctc
ttcggcaatctgctggacgttgtggtttcctccgaggagcagaataagaccaggggacgc
agccacccccatggtggccttctccagcctcaccacctcggggaacctcagtgcagctcg
tgcgacgagggcaaccctgctacctcacactgcctggattgccaggagtacctctgcgac
aactgcatgcgcgcacaccagcgagtccggctgaccaaagaccacttcatcgaacggctg
ctggagagactgcatctcacaagccgaaccaatatctccaacactccagtgtctctggcc
cagtcctaccactcgaattactcgctgcttcccatctttccggaccggactagatactgt
cagcaacacgacaatgaggtgttccggttcttctgtgactcgtgctcggtgcccatctgc
agagagtgcagcgtgggcctccacatgggccacagcttcatctacctgcaggaggccgtg
caggactcccgcgccatcaccatccagctgctgtctgatgcacagcagggccgccaggcc
atacagctcagcattgagaaggcccaggccatcgctgaacaggtggagatcaaagctaag
gtggtacagtcagaggtgaaagccatcactctgcggcataagaaggccctggaggagcga
gaatgtgaactgctgtggaaggtggagaagattcggcaggtgaaggccaaggccctgtac
ctgcaggtggagaagctgcacctgaacctgagccagctggacagcaccatcgcctcggtg
cagcaggctctggaggagggccgcagcatggagatcctgctggcccgcgagcgcatgctc
acccaaatccaggacctgaaggccctgcggggcgttctgcagccccaggaggacgaccgc
atcatgttcaccgccccggaccaagccctcctcatcgccatcaactccatgggcttcatc
agcagcggcgccttcgcccccgtcaccaaggctaccggcgacggcctgaagagggcgctg
cagggaaaggtggcctctttcaccgtggtgggctacgaccacgacggggagccccggctg
tcaggcggggacgggatctcggccgtggtgatgagcccggatgggaccctgtccactgcc
gacgtgacagaccaccagaacggcacgtacagcgtgagctacctgcccaaaatggaggga
gagcacctggtctcggtgctcctctgcagccagcacatcgatggcagccccttcaaagtg
ccggtgaagtcgggccggagctacgggggcgtgggcctgcccgtggcctccttcggggca
gagggggacggggacggccagctgtgtcggccctggggcatctgtgtggaccgggagggc
tacgtggtggtggcggatcgcagcaacaaccgcgttcagatcttcaagccctgcggaaca
ttccacctgaagttcggcactctggggtctcgccccggccagttcgaccggcccgccggc
gtggcctgcaaccctcagaggaggatcattgtggccgacaaggacaatcatcgcattcag
gtgttcaccttcgagggccagttcctgctgaagtttggagaaaagggttccaagaacggg
cagtttaactacccctgggatgtggctgtcaattcggagggcaagatcctggtctcagac
acccgtaaccaccgcgtccagctctttggcccagacggcacctttctgaataagtacgga
ttcgagggggcgctctggaagcattttgactcccccaggggtgtggccttcaatcaagag
ggccacctcgtggtgacggacttcaataaccaccggctattggtcatccggccagactgc
cagtcagcccgcttcctgggctcggagggcacggcgaacgggcagttccttcgtccacag
ggggtcgccgtggatcaagaggaccgcatcatcgtcgcagactcccgcaaccaccgcatt
caggtgtttgagcccaatggcaactttttatgcaagtttgggacccagggaaatggattc
ggccagatggaccgtccgtcagggatcgccattactccagatggaatgatcatcgctgtc
gacttcggcaacaaccgaatccttgtgttctga
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