Conger conger (European conger): 133107643
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Entry
133107643 CDS
T10633
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133107643 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133107643 (dhx36)
03012 Translation factors [BR:
ccog03012
]
133107643 (dhx36)
Enzymes [BR:
ccog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133107643 (dhx36)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
133107643 (dhx36)
Translation factors [BR:
ccog03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133107643 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
NB-ARC
Tn7_Tnp_TnsA_C
ATPase
NPHP3_N
TsaE
AAA_16
T2SSE
Motif
Other DBs
NCBI-GeneID:
133107643
NCBI-ProteinID:
XP_061072654
LinkDB
All DBs
Position
13:29508109..29529987
Genome browser
AA seq
922 aa
AA seq
DB search
MDESREQHITRLLKTVQNEPYIPGRDARPSTSESWRSGSDTGGHRWNLLFSYFDGEEPPP
EAVKMTSPAEVKEAVKDKDLEYLFQDILRESSLDQELKRDLLKKRDNPKYTEMLKFREKL
PSYKMKEDLVQLVRANQVLVVSGETGCGKTTQVTQFILDDYIERGMGSVCRVVCTQPRRI
SAISVAERVSAERAEKVGEGNSCGYQIRLQTRLPRKQGCVLYCTTGIILQWLRSDTHLSS
ISHLVLDEIHERNLQSDVLLTIVKDLIRLREDLKIILMSATLNADKFSKYFGNCPMVHIP
GFTYPVKEYLLEDVVEMLRYQPQTQDRRPRWKRRFMQGQMSRPEKEQKEEEYKESWPCFA
RTLRDRYSDSTIDVLEAMDDDDKIDLALIVELIRHIVLNEDEGAILVFLPGWDNISGLND
LLMAQQMFKSENFVIIPLHSLMPTVSQTQVFKRPPPGVRKIVIATNIAETSITIDDVVYV
IDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVSPGKCYHLYNGLRASLLDSY
QLPEIMRTSLEELCLQIKILKLGGIASFLCKALDPPSEQAVQLAITHLMDLNALDRNEEL
TPLGFHLARLPVEPHIGKMILFGALLGCLEPVLTIAASLSFKDPFFIPLGKEKLADMRRK
VLSKNSKSDHLTIVNAFWGWEDAKRRGNRFEREFCWDNFLSANTLQMLHNMKGQFAEHLL
GAGFVSSKNPKDPSSNINSENEKLIKAVIVAGLYPKVAKIRPSFSKKRAMVKVYTKPDGK
VNIHPKSVNAEETEFHYTWLIYHLKMKTSNIFLYDCTEVSPFSLLFFGGDISIQKDQDQD
TIAVDEWIVFQSPARIAHLVKNLKKELDSLLQERIKNPQPVDWSDTKSKDCAVISAIIDL
ITTQESDSGRGAAPRGGDRYYD
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtccagagagcagcacatcactagactattaaaaacggtccagaacgagcct
tacattcccggaagagatgcccgcccctccacatccgagagctggcgctccggctcggac
actggtggtcacagatggaatctgcttttcagctactttgatggtgaagagcctcctcca
gaggctgtgaaaatgacaagtcctgcagaagtgaaggaggcagtgaaagacaaagaccta
gagtatctgtttcaggatatcctcagagaatccagtctagaccaggagttgaagcgagat
ctgcttaagaaaagagacaacccaaaatacacagagatgttgaaattccgggaaaaactt
ccctcatacaaaatgaaagaggatctggtccagttggtccgggccaaccaggttctggtg
gtgagcggggagacgggctgtgggaagaccacgcaggtgacgcagttcatcctggacgac
tacattgagcggggcatgggctccgtgtgcagggtggtgtgcacccagcctcgccgcatc
agcgccatctcagtggcagagagagtgtctgcagagagggctgagaaagtgggggaaggg
aactcgtgcggttaccagatccggctgcagacccggttgccacggaaacagggctgcgtg
ctgtattgtacgacgggcattatccttcagtggctccgctcggatacacacctgtccagc
atcagtcacctggtcctggacgagattcacgagaggaacctgcagtccgacgtcctgctc
accatcgtcaaggacctgatccgcctccgtgaggacctcaaaatcatcctcatgagcgcc
acgctcaacgcagacaagttctccaagtactttggaaactgtcccatggtccacatccct
ggcttcacgtatccggtgaaggagtacctgctggaggatgtggtggagatgctcaggtac
cagccacagacccaggaccgccggcccaggtggaagaggcgcttcatgcaggggcagatg
tcccggcccgagaaggagcagaaggaggaggagtacaaggagagctggccctgcttcgcc
cgaacgctgcgggacaggtactcggacagcacgatcgatgtcctggaggcgatggacgac
gacgataagatcgacctggcgctgatcgtggagctgatccgacacatcgtgctgaatgaa
gatgaaggggccattctcgtcttcctgcctggctgggacaacatcagcgggctcaatgat
ctcctcatggcccagcagatgttcaaatcagaaaactttgtcatcattccgctgcattct
ctgatgcccactgttagtcagacccaggtgtttaagagaccgcctccaggcgtgcgcaag
atcgtgatcgccaccaacatcgcggagaccagcatcaccatagatgacgtggtgtatgtg
atcgatgggggaaagattaaggagacacacttcgacacgcagaacaacatcagcaccatg
acggcggaatgggtcagcctggccaacgccaagcagaggaggggtcgggctggaagggtt
tcaccagggaagtgctaccacctgtacaatggcctgcgtgccagcctgctggactcctac
cagctgcccgagatcatgcgcacgtcactggaggagctgtgcctgcagattaagatcctg
aagctgggagggatcgcctcgttcctgtgcaaggccctggacccgccctcagaacaggcg
gtccaactggctatcactcacctcatggacctgaacgctttggaccgcaatgaggagctg
acgccgctggggttccacctggcccgcctgcccgtggagccccacatcgggaagatgatc
ctgttcggagctctgctgggctgcctggagcccgtactcaccatcgccgctagcctgagc
ttcaaagaccccttcttcataccgctgggtaaggagaagcttgcagacatgaggagaaaa
gttttgtccaaaaactccaagagtgaccacctgaccattgtgaatgccttctggggctgg
gaggacgctaaacgacggggcaacagatttgaacgggaattctgctgggacaacttcctc
tccgccaacacgctgcagatgctgcacaacatgaaggggcagtttgctgaacatcttctg
ggggcgggctttgtcagcagcaagaaccccaaagaccccagctctaacataaactccgag
aatgagaagctgatcaaagcggtgattgtcgccgggctgtaccccaaagtagccaagatc
cggccaagtttcagcaagaagagggccatggtgaaggtttacactaagcctgacggaaaa
gtcaacatccaccccaagtcagtgaacgcggaagagacagagtttcactacacctggctt
atctaccacctgaaaatgaagacgagcaatatcttcctgtatgactgcaccgaagtgtcg
cccttctccctgctcttcttcggcggggacatctccatccagaaggaccaggaccaggac
accatcgctgtcgatgagtggatcgtgtttcagtcccccgcccggattgcgcacctcgtc
aagaatctgaagaaggagctggactcgctgcttcaggagaggattaagaaccctcagcct
gtagactggagcgacaccaagtctaaggactgtgctgtcatctcagccatcatcgacctc
atcaccacccaggagagcgactccggccgaggcgctgcccctagaggcggagaccggtac
tacgactag
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