Conger conger (European conger): 133107749
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Entry
133107749 CDS
T10633
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ccog Conger conger (European conger)
Pathway
ccog03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133107749 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccog03041
]
133107749 (prpf8)
Spliceosome [BR:
ccog03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
133107749 (prpf8)
Complex C
U5 SnRNP specific factors
133107749 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
133107749
NCBI-ProteinID:
XP_061072884
LinkDB
All DBs
Position
13:45676378..45706237
Genome browser
AA seq
2338 aa
AA seq
DB search
MAAAFPYRGVPGSIPAGIPTPGQIPDYMSEEKLQEKARKWQQLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGAMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPDEDGSVVDWMYEHQPLRDNTKYVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDYNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETTEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDI
ATEGAHPIRLYCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGGKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLSNPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcgtttccataccgaggagttcccgggagcattcccgcgggcatcccgact
ccaggccagattcccgactacatgtccgaggaaaagctgcaggagaaagcgcgtaagtgg
cagcagctgcaggcaaagcggtattcggagaagcggaagttcggcttcgtggacgcgcag
aaggaggacatgccccccgagcacgtccgcaagatcatccgagaccatggagacatgacc
aacaggaagttccgccatgacaagagggtctacctcggcgctctgaagtacatgccccat
gcggtgctgaagctcctggagaacatgcccatgccctgggagcagatccgggacgtgccc
gtgctctaccacatcaccggcgccatctccttcgtcaacgagatcccctgggtcatcgaa
cccgtctacatcgcccagtggggggccatgtggatcatgatgcgtcgtgagaagcgggac
cggcggcacttcaagcgcatgcgcttcccgccgttcgacgacgaggagccgccgctggac
tacgccgataacatcctggacgtggagccgctggaggccatccagatggagctggacccc
gacgaggacgggtctgtggtggactggatgtacgagcaccagcccctgcgagacaacacc
aagtatgtgaatggcaccacctacaggcgctggcagttcactctgcccatgatgtccacc
ctgtaccgtctggccaaccagctgctcactgacctggtggactacaactacttctacctg
ttcgacctgaaggccttcttcacctccaaggccctgaacatggccatccccggtgggccc
aagttcgagcccttggtccgagacatcaacctgcaggatgaagactggaacgagttcaat
gacatcaacaagatcatcatcaggcagccaatcaggacggagtacaaaatcgccttcccg
tacctgtacaacaaccttccgcaccacgtgcacctcacctggtaccacactcccaatgtg
gtgttcattaagactgaggatcccgatctccctgccttctacttcgaccccctgatcaac
cccatctctcacagacactcggtcaagagccaggaacccctgccagacgacgatgaggag
tttgagctgccggagtatgtggagcccttcctcaaggagacgcctctctacaccgacaac
acagccaatgggattgctctgctctgggcgccccgccccttcaacctgcgatcgggaaga
acccgtcgggctatcgacatcccgctcatcaagaactggtatcgcgagcactgccccgca
ggtcagccagtgaaggtgcgagtctcctatcagaagctgctgaagtactacgtgctcaac
gccctgaaacacagaccccccaaggcccagaagaagaggtacctgttccggtccttcaag
gccacaaagttcttccagtccaccaagctggactgggtggaggtgggtctgcaggtctgc
aggcagggctacaacatgctgaacctgctcatccaccgcaagaacctcaactacctgcac
ctggactacaacttcaacctcaagcccgtcaagaccctcaccaccaaggaacgtaagaag
tctcgattcgggaacgcgttccatctgtgtcgtgaggtgcttcgtctcagcaagctggtg
gtggacagccacgtgcagtacaggctggggaacgtggacgccttccagctggctgacggg
ctgcagtacatcttcgcccacgtggggcagctgaccgggatgtaccgctacaagtacaag
ctgatgaggcagatccgcatgtgcaaggacctgaagcacctcatctactaccgcttcaac
acggggccggtggggaagggccccggctgcggcttctgggcccccggctggcgggtgtgg
ctgttcttcatgagaggcatcacccccctgctggagcgctggctggggaacctgctggcc
cgccagttcgaaggtcggcactcgaagggcgtggcgaagacggtgacgaagcagcgcgtg
gagtcgcacttcgacctggagctgcgtgcggccgtcatgcacgacatcctggacatgatg
cccgagggcatcaagcagaacaaggcccgcaccatcctgcagcacctgagcgagtcctgg
aggtgctggaaggccaacatcccctggaaggttcctggactccccacccccattgagaac
atgatcctccgctacgtgaaggccaaagccgattggtggacgaacacggcccactataac
cgcgagcgaatcaggcgcggagccaccgtggacaagaccgtgtgcaagaagaacctgggc
cgcctgacccggctgtacctgaaggccgagcaggagaggcagcacaactacctgaaggac
ggcccttacatcacggcggaggaggccgtggccatctacaccaccaccgtccactggctg
gagagccgccgcttctcccccatccccttccccccgctgtcctacaaacacgacaccaaa
ctgctcatcctggccctcgagcgcctgaaggaggcctacagtgtgaagtcccggctgaac
caatcgcagcgggaggagctgggtctgatcgagcaggcctatgacaaccctcacgaggcc
ctgtccaggatcaagcgtcacctgctcacccagcgcgccttcaaagaggtgggcatcgag
ttcatggacctgtacagccacctggtgcctgtgtacgacgtggagccgctggagaagatc
acggacgcctacctggaccagtacctgtggtacgaagcagacaaacgccggctgttcccc
ccctggatcaaaccggctgacaccgagccccccccgctgctcgtgtacaagtggtgccaa
gggatcaacaacctgcaggacgtttgggagacgacggagggcgagtgcaacgtcatgctg
gagtctcgctacgagaagatgtacgagaagatcgacctgacgctgctcaacaggctgctc
cgcctcatcgtggaccacaacatcgctgactacatgaccgccaagaacaacgtggtcatc
aactacaaggacatgaaccacaccaactcgtatgggataatccgggggctgcagttcgcc
tccttcatcgtgcagtactacgggctggtgatggacctgctggtcctggggctgcaccgg
gccagcgagatggcgggacccccccaaatgcccaacgacttcctgagcttccaggacatt
gctaccgagggcgcccaccccatccggctgtactgccgctacatcgaccgcatccacatc
ttcttcaggttcaccgctgacgaggctcgggacctgatccagaggtacctgacggagcac
cctgaccccaacaacgagaacatcgtgggctacaacaacaaaaaatgctggcccagagat
gccaggatgaggctgatgaagcatgatgttaaccttggacgtgccgtgttctgggacatc
aagaaccgcctgccccgctcggtcaccacggtgcagtgggagaacagctttgtgtccgtc
tacagcaaggacaaccccaacctgctcttcaacatgtgcggcttcgagtgccgcattctg
cccaagtgccgcaccagctacgaggagttcacgcacaaggacggcgtgtggaacctgcag
aacgaggtgacgaaagagcgcacggcccagtgtttcctccgggtggatgacgagtccatg
cagagattccacaaccgtgtccggcagatcctcatggcctccggatccaccaccttcacc
aagatcgtgaataagtggaacacggctctgatcgggctgatgacgtacttccgcgaggcg
gtggtgaacacgcaggagctgctcgacctgctcgtcaagtgcgagaacaagatccagacc
cggatcaagatcggcctcaactccaagatgcccagccgcttcccgcccgtggtgttctac
acccccaaagagctgggcggcctgggcatgctctccatgggacacgtcctcatcccccag
tcggacctccggtggtcgaagcaaactgacgtgggcatcactcacttccgctctggtatg
agccacgaggaggaccagctgatccccaatctgtaccgctacatccagccctgggagagc
gagttcatcgactctcagagagtctgggccgagtacgccctcaagcgacaggaggccatc
gcccagaacaggcggttgaccttggaagacctggaggactcttgggaccgaggcatcccc
cgaatcaacaccctcttccagaaggaccgccacacgctggcctacgacaagggctggagg
gtcaggaccgacttcaaacagtaccaggttctgaagcagaacccgttctggtggacacac
cagaggcatgatgggaagctgtggaacctgaataactaccgcacggacatgatccaggct
ctgggaggcgtggagggcatcctggagcacaccctcttcaaggggacctacttccccacc
tgggaggggctgttctgggagaaggccagtggctttgaggagtccatgaagtggaagaag
ctgaccaacgcccagagatccggtctgaaccagatccccaaccgacgcttcacactgtgg
tggtcccccaccatcaaccgagcaaacgtgtacgtgggtttccaggtgcagctggatctg
acggggatcttcatgcacggaaagatccccaccctgaagatctccctcatccagatcttc
agagcccacttgtggcagaagatccacgagagcatcgtcatggacttgtgtcaggtgttc
gatcaggagctcgatgctctggaaattgagacggtgcagaaggagaccatccaccccagg
aagtcctacaagatgaactcgtcctgcgccgacatcctgctgttcgcctcctataagtgg
aacgtgtcccgcccctccctgctggctgactccaaggacgtgatggacagcaccaccacc
cagaagtactggatcgacatccagctgcgatggggcgactacgactcgcacgacatcgag
cgctacgcccgcgccaagttcctggactacaccaccgacaacatgagtatctacccatca
cccaccggggtcctcatcgccatcgacctggcctacaacctacacagtggctatgggaac
tggttcccgggcgggaagccgctgatccagcaggccatggcgaagatcatgaaggcgaac
ccggcgctgtacgtgctgcgggagcgcatccgcaagggcctgcagctctactcctccgag
cccaccgagccctacctgtcctcccagaactacggggagctcttctccaaccagatcatc
tggttcgtcgacgacaccaacgtctacagggtcaccatccacaagacgtttgagggaaac
ttaaccaccaagcccatcaacggagccattttcatcttcaacccccgaaccgggcagctc
ttcctcaagatcatccacacctccgtgtgggcagggcagaaacgtcttggacagttggcc
aagtggaagacagctgaggaggtggccgctctgattcgctcgctgcccgtggaggagcag
cccaaacagatcatcgtcaccaggaagggtatgctggaccccctggaggtccacctgctg
gacttccccaacatcgtgatcaagggctcggagctgcagctgcccttccaggcctgtctg
aaggtggagaagtttggggatctgattctgaaggccaccgagccgcagatggtcctgttc
aacctgtacgacgactggctgaagaccatctcctcctacacggcgttctcccgtctcatc
ctgatcctccgggcgctccacgtgaataacgaccgcgccaaagtcatcctgaagccggat
aagaccaccatcacggagccccaccacatctggcccacactcacggacgaggagtggatc
aaggtggaggtgcagctcaaagacctcatcctggccgactacggcaagaagaacaatgtg
aacgtggcgtccctgacgcagtcggagattcgggacatcatcctgggcatggagatctcc
gcgccctcgcagcagcggcagcagatcgcggagatcgagaagcagacgaaggagcagtct
cagctgaccgccacgcagacccgcaccgtcaacaagcacggcgacgagatcatcacctcc
accaccagcaactacgagacccagaccttctcctccaagaccgagtggagagtgagggcc
atctctgctgctaacctccacctccgcaccaaccacatctacgtctcctccgacgacatc
aaggagacgggctacacctacatcctccccaagaacgtcctgaagaagttcatctgcatc
tctgacctgcgcgctcagattgcagggtacctgtacgggaccagccccccagataacccc
caggtgaaggagatccgctgcatcgtcatggtgccccagtggggaacgcaccaaaccgtc
catctgcccaatcaactgccccagcatgagtacctcaaggagatggagcctctgggctgg
atccacacgcagcccaacgagtcgccccagctgtccccgcaggacgtcaccacccacgcc
aaggtcatggccgacaacccgtcctgggacggagagaagaccatcatcatcacctgcagc
ttcacccctgggtcctgcaccctgacggcctacaagctcacccccagcgggtacgagtgg
ggcaggcagaacaccgacaagggcaacaaccccaagggctacctgccctcgcactacgag
cgtgtgcagatgctgctgtccgaccgattcctggggttcttcatggtgcccgggcaggtg
tcctggaactacaacttcatgggtgtccggcacgatccgaacatgaagtacgacctgcag
ctgtccaaccccaaggagttctaccacgaggtccaccggccgtcacacttcctcaacttc
gcctcgctccaggagggcgagatctacaacgccgaccgagaggacatgtacgcttag
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integrated database retrieval system
