Conger conger (European conger): 133107903
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Entry
133107903 CDS
T10633
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133107903 (dhx34)
Enzymes [BR:
ccog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133107903 (dhx34)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
133107903 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
zf-C2H2_DHX34
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_16
AAA_19
XAF1_C
Motif
Other DBs
NCBI-GeneID:
133107903
NCBI-ProteinID:
XP_061073176
LinkDB
All DBs
Position
13:complement(17881650..17893906)
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AA seq
1146 aa
AA seq
DB search
MESDRRRDSRSWDWDSPRCRAQLDEVFFRPQDYIQAGSTEHKEFWTFFERFQRFKEKRDM
SLSKGSDDAKDESQGSKSRKKADLDLGLPKEYDARYRINVSVCTRDVEERLGGSERRRQT
SSGPGKEEIATCRLTLLHFLDFCQRQSFGKLAKLRREQKSLPIFQYRDRIVELVRTHPVV
VVAGDTGCGKSTQVPQYLLASGFSHIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIR
FETTRTPATKLLFLTEGLLLRQIQQDAALGRYQVLIVDEVHERHLHCDFLLGVLRTLLLL
RPDLRLVLMSATINIKLFSSYFHSAPVLQVPGRLFPIQVIYQPIPQEEQVSRSEKLDPRP
YLRVLQGIDQRYPPEERGDLLLFLSGVAEISTILEACQTYATHTSRWIVLPLHSTLSLAQ
QDKVFDMSPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWIS
RASSEQRKGRAGRTGPGVCYRLYAESDYEAFAPYPVPEIHRVALDSLVLQMKSMGLGDPR
SFVFIDPPPPASIQTALTYLREQGALDGHGELTCIGRLLAQLPVDVVIGKMLVLGSVFSL
VEPVLTLAAALSVQSPYLRSAQHNPDCATARQPLFSNQGDPFTLLNTFNTWVQVKAERGG
GSRKWCRRRGIEEQRLYEMVNLRRQFKELLKSHGLLEAPDSAPSRWDREQRRQRFSERQK
LHQLKRDHDLQEGTRRKVLRLGEGEEGGASSGSEGEEPGRGRRGKDGAGQSVDIQEVKFK
LRHSVAELQEAAGASQDLSSRQQALLKLVLCRGLYPQLALPDEHNATRKDSEQIFHTRNK
QGVVIHPTSVFASDPEVLHVPEPDPREMGSEKAESAKHQLLAFVTLLETNKPYVSNCVRV
PALQALLLVASSVDSNADCTRVVVDGWLELTLSDAEAALRSIASALTLRGDWERLLQAQL
RNSTPSLDPSTPGLSHKELGKLSEGLVRFLLYTEVSYSLRRLGALESQNLYIGPQQVQGL
PGPPALNPLFPGLEAKPHPVKGGLRVTSFFTYNCLSDSKDLYSECLRTFWSCPHCDLYMP
LTPLERMHHEATCRPAGELQPTEEPEEKVASSKASSSLTRVYHCDVCDKDLTLTSTEILK
HKRQHL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgatcggaggagggacagccggtcctgggattgggacagcccgaggtgccgt
gcccagctggacgaggtgttcttccgcccacaagattacattcaggcgggtagcacggag
cacaaggaattttggactttctttgagcgcttccaaaggttcaaggagaaaagggacatg
tcattgtcaaaaggcagcgacgacgcaaaggacgagagccaggggagcaaatctaggaag
aaggcagacctggacctgggtttgcccaaggaatatgacgcccgctaccggatcaatgtg
tccgtgtgcaccagggatgttgaggagcgcctcggtgggtcagagcgacggcgacagacc
tcatctggtccgggaaaggaggagatagccacctgtcgcctgactttgcttcacttctta
gacttttgccaaaggcagagcttcggcaagctggcaaaacttcgccgggaacagaaaagc
ctgccgatattccagtacagagaccgcatcgtggagctggtgaggactcaccccgtggtg
gtggtagcgggggacacgggctgcggaaagtccacccaggtgccccagtacctcctggcc
tccgggttcagccacatcgcctgcacgcagccccgtcgtatcgcctgcatatcgctggcc
aagagggtcagctttgagagtctcaaccagtacggatctaaggtgggctaccagatccgc
ttcgagacgacgcgcacgccggcgaccaagctgctgttcctgaccgaggggctgctgctg
cggcagatccagcaggacgcggcgctgggccggtaccaggtgctgatcgtggacgaggtt
cacgagcgccacctgcactgcgacttcctgctgggcgtgctgcgcacgctgctgctcctg
cggcccgacctgcgcctggtgctcatgtccgccaccatcaacatcaagctcttctccagc
tacttccacagcgcccccgtgctgcaggtccccgggcgcctcttccccattcaggtgatc
taccagcccatcccgcaggaggagcaggtgtcccgctcggagaagctggacccccggccg
tacctgcgggtcctccagggcatcgaccagcgctacccccccgaggagcggggcgacctg
ctgctgttcctgagcggcgtggccgagatctccaccatcctggaggcctgccagacctac
gccacccacacctcccgctggatcgtcctgcccctgcacagcacactgtccctggcccag
caggacaaggttttcgacatgtcgcccccgggggtgaggaagtgcatcatctccactaac
atcgcagagacctctgtcaccatcgatggcgtgcgatttgtggtggactcaggtaaggtg
aaggagatgagcttcgatccgaaggcgaagatgcagcggctgcaggagttctggatcagc
cgggccagctcagagcagcgcaagggccgggcgggtcggactgggccgggggtctgctac
cgcctgtacgccgagtccgattacgaggccttcgccccctaccccgtccccgaaatacac
cgggtggccctggactcgctggtgctccagatgaagagcatgggactgggggacccccgc
tccttcgtcttcatcgacccgccccctcccgctagtatccagactgctctgacctacctg
agggagcagggggcgctagacggccacggggagctcacctgcatcgggaggctgctggca
cagctgcctgtggacgtggtcatcgggaagatgctggtgttaggctccgtgttcagcctg
gtggagccagtcctgacactggctgctgccctcagtgttcagtcaccatacctgcggagc
gctcaacacaacccggactgtgccaccgccagacagcccctgttcagtaaccagggagac
cccttcaccctgctcaacacctttaacacctgggtacaggtgaaagcagagaggggcggg
ggctcgaggaaatggtgccggaggcggggcatagaggagcagcggctgtacgagatggtg
aacctgcgacggcagtttaaggagctgctgaagagccacgggctcctggaggccccggac
agcgccccctccaggtgggacagggagcagcgcaggcagcgcttcagcgagcggcagaaa
ctgcaccagctgaagcgggaccacgacctgcaggagggaacgcgccggaaggtcctgagg
ctgggggagggcgaggagggcggggcctcgtccgggtccgagggggaggaaccggggaga
gggaggcggggcaaggacggcgcggggcagagcgtggacatacaggaagtgaagtttaag
ctgcggcacagcgtggcggagctgcaggaagcagcgggcgccagtcaggacctgtcgtca
cggcaacaggccctgctgaagctggtgctgtgccgcgggctctaccctcagctggcactg
cccgacgaacacaacgccacgcgcaaggactctgagcagatcttccacacgcgtaataag
cagggtgtggtcatccaccccaccagtgtgttcgccagcgaccccgaggtgctgcacgtc
cccgagccggacccccgagagatgggctcagagaaggcagagagcgctaaacaccagctg
ctggccttcgtcactctgctggagaccaacaagccgtacgtctccaactgtgtgcgagtg
cctgctctacaggccctgctgttggtggccagctcggtggactctaacgcagactgcacg
cgggtggtggtggacggctggctggagctcaccctcagtgacgcagaggcagcgctgcgc
tccatcgcctctgccctgacgctgcgcggggactgggagcgcctccttcaggctcagcta
cgcaacagcacccccagcctcgacccctccacacctggcctgtcccacaaggagctgggc
aagctgagtgaggggctggtccgcttcctgctctacaccgaggtcagttacagcctgcgg
cgactcggcgctctggagtcccagaacctgtacatcgggccccagcaggtccaggggctc
ccgggcccccccgccctgaaccccctgttccccgggctggaggccaagccccaccctgtg
aaaggaggcctgcgggtcaccagcttcttcacctacaactgtctgagtgactctaaggat
ctgtacagcgagtgtctgcgcacgttttggagctgcccgcactgtgacctctacatgccc
ctcacgcccctggagcgcatgcaccatgaggccacctgcaggccggccggggaactgcag
cccacggaggagccggaagagaaggttgctagctccaaggcgtcctcctccctgacccgt
gtgtaccactgtgatgtctgcgacaaggacctcaccctcacctccacagagatcctcaaa
cacaagaggcagcacctgtga
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