Conger conger (European conger): 133108007
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Entry
133108007 CDS
T10633
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ccog Conger conger (European conger)
Pathway
ccog04136
Autophagy - other
ccog04140
Autophagy - animal
ccog04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133108007 (atg16l1)
04136 Autophagy - other
133108007 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133108007 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133108007 (atg16l1)
03029 Mitochondrial biogenesis [BR:
ccog03029
]
133108007 (atg16l1)
Membrane trafficking [BR:
ccog04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133108007 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
133108007 (atg16l1)
Mitochondrial biogenesis [BR:
ccog03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133108007 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
ATG16
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
eIF2A
WD40_RFWD3
CFAP251_N
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
Rab11-FIP3
KASH_CCD
HEF_HK
HAUS-augmin3
AP5B1_middle
FKBP15
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
133108007
NCBI-ProteinID:
XP_061073378
LinkDB
All DBs
Position
13:31761101..31773236
Genome browser
AA seq
624 aa
AA seq
DB search
MSGAERRTQCWWKRHIAEQLKQRDRVQRQAFEEIIHQYNRLLEKSDLQAVLSERLQPDKS
DHPNRHDLSPGVDVGRSDALLQEMAQIRIRHQEELTELHKKRGELAQNVIELNNQMQQKD
KEIQGNEAKMLQCQQRISELEAECRDLRSNLQDLERANQTLKDEYDALQITFGALEEKLR
RTTEDNQELVSRWMAEKAQEANRLNAENEKDTRRRQAKLQKDLAEAAKEPLPLDPDDDIE
VLPDDAPEGAGPADTSPSRASSRTPSKRNSQPPSSGLLDSISSIFGLSESVMPGLHPPDC
RRRSANSFGSSPDGAETQPGVCAEVRVPSTALHTFDAHDGEVNAVRFSPGSRLLATGGMD
RRVKLWEVVSGHCEYKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
LTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVM
SGHFDKKVRFWDIRAESIVRELELLGRITSLDLNQDRSELLTCSRDDLVKIIDLRSSSVR
QTFSADGFKCGSDWTRVTFSPDGCYVAAGSAEGTLFVWNVLTGKLERSLDKHHSSAINAV
SWSPSGAHVVSVEKGSKAVLWSDL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggccgagcgccggacgcagtgctggtggaaaagacacatcgccgagcagctg
aagcagagggatcgggtgcagaggcaggccttcgaggagatcatccaccaatataatcgt
ttgttggagaaatctgatttgcaggcagtgctgtcggagaggcttcagccagataaatct
gatcacccgaatagacatgatctgagccctggagtagacgtgggccgcagcgatgccctg
ctgcaggagatggcccagatccgcatccggcaccaggaggagctgaccgagctgcacaag
aagcgcggcgagctggcccagaatgtcattgaactgaacaaccaaatgcagcagaaggac
aaggagatccagggcaatgaggccaagatgctgcaatgtcagcagcgcatctcggagctg
gaggcggagtgccgggacctgcgcagcaacctgcaggacctggagcgggccaaccagacg
ctgaaggacgagtacgacgccctgcagatcaccttcggcgcgctggaggagaagctgcgt
cgcaccaccgaggacaaccaggagctggtctcccgttggatggccgagaaggcccaggag
gccaaccgcctcaacgcagagaacgagaaggacaccagacgcagacaggccaaactgcag
aaggacctagcagaggcagccaaggagcccctgcccctcgacccggatgatgacatcgag
gttctgccagatgacgccccagaaggggcggggccagcggacacctcgcccagccgagcc
tcctcccgcaccccgagcaagcgcaactcccagcctccctcgtcaggactcctggactcc
atatccagtatctttggcctgtctgagtctgtgatgcctggactccacccgcctgactgc
aggcggcggtccgcaaactcgttcggcagttcacctgacggtgcagagacgcagcctggg
gtgtgtgcagaagtgcgagtcccttcaacggccctgcacacatttgacgctcatgacgga
gaggtgaacgcggtgcgtttcagtcctgggtctcgtctcctggccacggggggtatggac
cgacgggtgaagctctgggaggttgtctcaggccattgtgagtacaaaggggctttgact
ggcagcaacgctgggatcactagcattgagtttgatagtgcgggttcttacctgcttgct
gcgtccaatgatttcgccagccggatctggactgtagacgattacaggctgcggcacacc
ctcacgggacacagtggaaaagtgctgtctgcgcgcttcctcctggacaatgcccgcatc
gtatctgggagttacgaccggaccctgaagctctgggacctccgcagcaaagtctgtatg
aagacagtatttgcaggctccagctgtaatgacattgtgtgtacagagcagtgcgtaatg
agcggccattttgataagaaagtgcgcttctgggacatcagggcggagagtattgttcgg
gagctggagctcctgggccggatcacctcgctggacctgaaccaggaccgctccgagctg
ctcacctgttcccgtgacgacctggtcaagatcatcgacctgcgcagcagcagcgtgcgg
cagaccttcagtgctgacggcttcaagtgtgggtcggactggactcgagtaacgttcagc
cccgatgggtgctacgtagcggcgggctctgcggagggaaccctgtttgtgtggaatgtg
ctgactggcaagctggagcgctccctggacaagcaccacagctccgccatcaacgccgtg
tcctggtctccgtctggagcccacgtggtcagcgtggagaaggggagcaaggccgtgctg
tggtccgacctgtga
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