Conger conger (European conger): 133109626
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Entry
133109626 CDS
T10633
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccog03041
]
133109626 (rbm39a)
Spliceosome [BR:
ccog03041
]
Common components
Common spliceosomal components
General mRNP proteins
133109626 (rbm39a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RRM_5
PRP38_assoc
RBD_DEAH11
RRM_7
RSRP
Motif
Other DBs
NCBI-GeneID:
133109626
NCBI-ProteinID:
XP_061075028
LinkDB
All DBs
Position
14
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AA seq
543 aa
AA seq
DB search
MADDFDIEAMLEAPFRKDELRSSSANGHEERSKKKKKSKSRSRSRDKRRSRSRDRKKSRD
RKRSKSRERKRSRSKERRRSRSRSRERGGRYRVRKSPFAGPKFNGGPRGKIGPPPAIKLS
RRRSRSRSPFKKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRD
VRMISDRNSRRSKGIAYIEFVEATSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAMANN
LQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFADA
ECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGSIPFGAMAAVTDLQARLTQPPEAAAMNPGALNLNLNMN
MNVNTPLNLPTQPIATHCFQLSNMFNPQSEDGPGWDVEIQDDVIEECNKHGGVVHIYVDK
NSAQGNVYVKCPTIPAAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQLLMP
TRR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgactttgatatagaagcaatgcttgaggcgcctttcagaaaggatgagctc
aggtccagtagtgccaacggccatgaagagcgtagtaagaagaaaaagaagagtaaaagt
cgtagcaggagccgcgacaagcgcaggagccgcagtcgggaccgcaagaagagccgggac
aggaagaggagcaagagccgcgagaggaagaggagccgcagcaaggagcgccgccgctcc
cgctcccgcagccgcgagcgcggaggccgataccgagtccgcaagagcccgtttgctggg
ccgaaatttaacggtggccccagggggaagattggcccaccaccagccatcaaactaagc
cggagacggtctagaagtcgcagcccgttcaagaaagacaagagccccgtcagggagccc
atcgacaacctgaccccagaggagagggacgctcgcaccgtcttctgcatgcagctggct
gctcgcatccggccccgcgacctggaggagttcttctccgccgtgggaaaggtgagagac
gtgagaatgatctcggacagaaactcccggaggtcgaagggcatcgcgtacatcgagttt
gtggaggccacctccgtgcccctggccatcggcctcacgggccagaggctcctgggggtg
ccgatcatcgtccaggcctcgcaggctgagaagaacagggccgccgccatggccaacaac
ctgcagaagggcagcgcggggcccatgcggctgtacgtgggctccctgcacttcaacatc
accgaggacatgctgcggggcatcttcgagcccttcggccggattgaaagcattcagctg
atgatggacagcgagacgggcaggtccaaaggatacggtttcatcacgttcgcggacgcc
gaatgcgccaagaaggccctggagcagctgaacgggttcgagctggccggccggcccatg
aaggtggggcacgtgacggagcgcaccgacgcctccaccgccagctccttcctggacagc
gacgagctggagcgcaccggcatcgacctgggcaccaccggccgcctgcagctcatggcc
cggctcgctgagggcactggcttacagattcccccagctgcccagcaggccctgcagatg
agtggatccataccctttggagccatggcagctgtaacagatttacaagccaggttgact
cagccccctgaagctgcagccatgaacccgggagccttgaacctgaacctcaacatgaac
atgaacgtcaacacccctctgaacctaccaacgcagcccatcgccacgcactgcttccag
ctgtcaaatatgttcaaccctcagtcggaagatggtcctggctgggatgttgaaattcaa
gatgatgtcatagaagaatgcaacaaacatggcggagttgtgcacatatacgtcgacaag
aattctgcacaaggaaacgtgtacgtgaaatgtccgaccattcccgccgccatggcagcc
gtgaatgcgctgcacggacggtggttcgcagggaaaatgatcaccgctgcgtacgttccc
ctccccacgtaccacaacctgttccccgactccgtgacggccactcagctcctaatgccc
acccgccgatga
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