KEGG   Conger conger (European conger): 133110024
Entry
133110024         CDS       T10633                                 
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
ccog  Conger conger (European conger)
Pathway
ccog03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccog00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    133110024 (cstf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccog03019]
    133110024 (cstf1)
Messenger RNA biogenesis [BR:ccog03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     133110024 (cstf1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 CSTF1_dimer Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_DCAF12 DUF7099 Cytochrom_D1 Beta-prop_SPT8 Beta-prop_WDR75_2nd PROPPIN Frtz
Other DBs
NCBI-GeneID: 133110024
NCBI-ProteinID: XP_061075826
LinkDB
Position
14:complement(10252448..10259028)
AA seq 431 aa
MYRPKPTLRDRQHLYKLIISQLLYDGYTNIANCLISEVKPPNVVSPSEQLMQLAKMGMEN
DDSAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHIQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCYVSSNPRDQHTDTISGVCYNPSANSYVTCSKDGSIKLWDGVSNRCVATF
DKAHDGAEVCSAVFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQMHRTQAV
FNHTEDYVLLPDERTISLCCWDSRSAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRTTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtatcgtcccaagcccaccctaagagaccgacagcacctctacaagttgataattagt
caacttttgtatgacggatacaccaacatcgccaactgcttgatcagcgaggtgaagccg
ccaaacgtggtgtcgccctcggaacagcttatgcagcttgccaagatggggatggagaat
gacgacagcgccgtgcagtacgccatcggccggtcggacacggtggcgcccggcaccggg
atcgacctggagttcgacgcggacgtgcagaccatgtcgcccgaggcctccgagtacgag
acgtgctacgtcacctcgcacaaggggccctgccgcgtggccacctacagccgggacggc
cagctcatcgccaccggctcggccgacgcctccattaagattctggacacggagcgcatg
ctggctaaaagcgccatgcccattgaggtgatgatgaacgagacagcccaacagaacatg
gagaaccaccccgtgatccgcactctgtacgatcacgtcgatgaggtcacctgcctggcc
ttccaccccaccgaacagatcttggcctccgggtcacgtgactacaccctcaaactgttt
gactactccaaaccctctgcaaagagagcctttaaacacatacaggaagccgaaatgctg
cgctccatctctttccacccgtcgggcgacttcctgttggtggggacgcagcacccgacc
ctgcggctgtacgacgtgaacaccttccagtgctacgtgtcctccaacccccgcgaccag
cacacggacaccatctccggcgtctgctacaaccccagtgccaacagctacgtcacctgc
agcaaggacggcagcatcaagctgtgggacggcgtgtccaaccgctgcgtggccaccttc
gacaaggcccacgacggggccgaggtctgctccgctgtcttctccaaaaactccaagtac
atcctgtccagcggcaaggactcggtggccaagctgtgggagatctccactggcaggacg
ctggtcaagtacacgggggctgggctgagtgggcgtcagatgcaccgcacccaggccgtg
ttcaaccacaccgaggactacgttctgctgcctgacgagaggaccatcagcctctgctgc
tgggactcccgctcagccgagaggaagaacctcctctccctgggccacaacaacatcgtc
cgctgcatcgtgcactcccccaccaaccccggcttcatgacctgcagcgacgacttcagg
gcacggttctggtaccgccgtaccacgacagactga

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