Conger conger (European conger): 133111441
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Entry
133111441 CDS
T10633
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccog03000
]
133111441
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccog03310
]
133111441
Transcription factors [BR:
ccog03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133111441
Nuclear receptors [BR:
ccog03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
133111441
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133111441
NCBI-ProteinID:
XP_061077788
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Position
15:complement(12089881..12144015)
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AA seq
467 aa
AA seq
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MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCL
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQP
GEAEPLTPTYGLSANGLTELHDDLSGYMDGHTPDGGKADSAVSSFYLDIQPSPDQSGLDI
NGIKPEPICDFAPGSGFFPYCSFTNGDTSPTVSMAELEHLAQNISKSHMETCQYLREELQ
QMTWQAFLQEEMENYQNKPREVMWQLCAIKVTEAIQYVVEFAKRIDGFMELCQNDQIVLL
KAGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLS
EDEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVST
LRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVEG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatttcagctatgaaagctcaaatcgaaattattccttgcaagatctgt
ggagataaatcatcaggaatccattatggtgtgataacgtgcgaaggatgcaagggcttc
ttcaggaggagccagcagagcaacgctgcgtactcctgtccccggcagaagaactgcctg
atcgaccgcaccagccgtaaccgctgccagcactgccgcctgcagaagtgcctggctgtg
ggcatgtcccgagacgcggtgaagttcggccgcatgtctaagaagcagagggacagcctg
tacgcggaggtgcagaagcaccgtctgcagcagcagcagcgcgaccaccagcagcagccg
ggggaggcggagccgctcacgcccacctacggcctctcggccaacgggctgacagagctg
cacgatgacctcagcggctacatggacggccacacccccgatggaggcaaggccgactcg
gccgtcagcagcttctacctggacatccagccctcgcccgaccagtccggcctagacatc
aacggcatcaagccggagcccatctgcgacttcgccccgggctccggattcttcccctac
tgctccttcaccaacggggacacgtcccccaccgtgtccatggcagagctagaacatctg
gcccagaacatctccaagtcccacatggagacgtgtcagtacctgagggaggagctccaa
cagatgacctggcaggccttcctgcaggaggaaatggagaactaccagaacaagcccagg
gaagtgatgtggcagctgtgtgccatcaaagtcacggaggccatccagtacgtggtggag
ttcgccaagcgcatcgacggcttcatggagctgtgccagaacgaccagatcgtgcttctg
aaagcgggttctctggaggtggtgtttgtgagaatgtgccgtgcctttgactctcagaac
aacacagtctatttcgacgggaagtatgccgggcctgatgtctttaaatcattaggttgc
gacgacttgatcagctccgtctttgaattcgggaagaacctgtgttctatgcacctgtcg
gaggacgagatcgccctgttctcggcgttcgtgttgatgtctgcggaccggtcctggctc
caggagaaggtgaaggtggagaagctgcaacagaagatccagctggccctacagcacgtc
ctgcagaagaaccacagagaggacgggattctgacgaagttgatatgtaaagtgtcgaca
ctgcgggcgctgtgtagcagacacacggagaagctgacggcgtttaaagcaatatacccg
gacattgtgcgcgcacacttcccccccctctacaaggagcttttcggctcggacttcgag
cagtcgatgcccgtggaggggtaa
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