Conger conger (European conger): 133111484
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Entry
133111484 CDS
T10633
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
ccog Conger conger (European conger)
Pathway
ccog03420
Nucleotide excision repair
ccog04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133111484 (ddb1)
09124 Replication and repair
03420 Nucleotide excision repair
133111484 (ddb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccog04121
]
133111484 (ddb1)
03400 DNA repair and recombination proteins [BR:
ccog03400
]
133111484 (ddb1)
Ubiquitin system [BR:
ccog04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
133111484 (ddb1)
DNA repair and recombination proteins [BR:
ccog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
133111484 (ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
133111484 (ddb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
133111484
NCBI-ProteinID:
XP_061077869
LinkDB
All DBs
Position
15
Genome browser
AA seq
1139 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGENKDLLFILTAKYNACILEYKQNGDNIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQVPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVTHQQLIQITSGSVRLVM
QETKALVSEWKEPQGRNISVAACNSTQVVLAVGRVLYYLEIHRGELKQISSTEMEHEVAC
LDITPLGEGGESPLCAVGLWTDISARILKLPSFSALHKEMLGGEIIPRSILMTTFEGSHY
LLCALGDGALFYFGLDLQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYS
SNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESP
RRICYQEMSQCFGVLSSRVEMQDASGATAAVRPSASTQALSSSVSSSKLFPSSTSLHETS
FGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDPSVYFIVGTAMVYPEEA
EPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT
ECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD
DDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGAFHLGEFVNVFSHGSLVLQNLGESS
TPTQGSVLFGTVNGMIGLVTSLSEGWYSLLMDLQNRLNKVIKSVGKIEHSFWRSFHTERK
SEQATGFIDGDLIESFLDLGRAKMQEVVSSLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataattacgtggtcaccgcacagaagccgacggccgtcaatgcctgcattacc
ggccacttcacctccgcggaggaccttaacctcctcatcgccaagaacaccaggctggag
atctacgtggtgacagccgagggactgcggccggtgaaggaggtggggatgtacggcaag
atcgctgtcatggagctcttcaggcccaagggcgagaacaaagacctgctgttcatcctg
acagccaagtacaacgcctgcatcctggagtacaagcagaacggggacaatatcgacatc
atcacccgcgctcatggcaacgtgcaggatcggattggccggccctctgagacggggatc
attggcatcgtggacccagagtgccgcatgatcggcctccggctgtacgacggtcttttt
aaggtcatccccctcgaccgagagaaccgcgaactcaaggccttcaatatccgcctggag
gagcttcaggttatcgacgtccacttcctgtacggctgccaggtccccacagtctgcttc
atttaccaggacccccagggtagacatgtgaagacgtatgaagtgtcactgcgtgaaaaa
gagttcaacaagggcccctggaagcaggagaatgtggaggctgaggcgtcgatggtcatc
ccagtcccagagccttttgggggtgctataatcatcgggcaagagtcaatcacctaccac
aacggagacaaatatttggccatagcgccccctaccatcaagcaaagcaccatcgtgtgc
cataaccgcgtggaccccaacggctcccgctacctgctgggggacatggagggccgcctc
ttcatgctgctgctggagaaggaggagctgatggatggagccgtggtgctgaaggacctg
cgggtggagctcctgggagagacgtccatcgccgagtgcctcacgtacctggacaacggc
gtggtcttcgtgggctcccggctcggagactcccagctggtcaagctgaatgtggacagc
aatgaccagggctcgtatgttgctgtgatggagaccttcacaaacctgggacccattgtg
gacatgtgcgtagtggacctggagagacagggccaaggacagctggtcacctgctctggg
gcattcaaggagggatctctgagaatcatccgcaacggcatcggaatccacgagcacgcc
agcatcgacctgccggggatcaaaggactgtggcccttgcgctctgaggccgggcgggag
accgatgacatgctggtgctttccttcgtcggccagaccagggtgctgatgctgagcggg
gaagaggtagaggagactgagctccccgggtttgtggacaaccagcagaccttttactgc
ggcaatgtgacacatcagcagctcattcagattacctccggctcggtgcggttggtgatg
caggagaccaaagccctggtgagcgagtggaaggagccccagggcaggaacatcagcgtc
gccgcctgcaactccacacaggtggtcctggctgtgggccgagtgctgtactacctggag
atccaccgaggagagctgaagcagatcagctccacggagatggagcacgaggtggcctgc
ctggacatcacgcccctcggggagggcggggagtcccccctgtgcgccgtgggcctctgg
acggacatctccgcccgcatcctcaaactcccctccttcagcgccctgcacaaggagatg
ctgggcggagagatcatccctcgctccatcctgatgaccacgtttgagggcagccattac
ctgctctgcgccctgggagatggagctctcttctactttggcctggaccttcagacaggt
gtcctgagcgagcggaagaaggtcaccctggggacccagcccacagtcctccgcaccttc
cgctccctctccacctccaacgtcttcgcctgctccgaccggcccaccgtcatatactcc
agcaaccacaagctggtcttctccaacgtcaacctcaaagaggtcaactacatgtgcccc
ctcaactccgagggctaccccgacagtctcgctctggccaacaacagcacgctgaccatt
ggaaccatcgatgagatccagaaattacacattcgcactgtcccattgtacgagtccccc
aggagaatctgctatcaggagatgtctcagtgtttcggggtgctgtccagccgggtggag
atgcaggacgccagcggggcaacagctgctgttcggcccagtgcgagcacacaggctctt
tccagcagcgtcagctccagcaagctcttccccagcagcacctccctccatgagacctcc
tttggggaggaggtggaggtccacagcctgctggtggtggaccagcacacctttgaagtg
ctccacgctcaccagttcctgcagagcgagtacgctctcagcatggtgtcctgtcggctg
ggcagggacccgtctgtgtacttcatcgttggcacggcgatggtgtatcccgaggaggcg
gagcccaagcagggtcgcatcatcgtctttcactacaccgacggaaagctacagactgtg
gcagagaaggaggtaaagggagcggtgtattccatggtggagttcaacggcaagctgctg
gcgagtatcaacagcactgtgcgcctgtatgagtggacagctgagaaagagctgaggacg
gagtgtaaccactacaacaacatcatggcgctttatctgaagacgaagggtgatttcatc
ctggtgggagacctgatgaggtccgtgctacttctggcctacaagcccatggagggaaac
tttgaggagatcgcccgagactttaaccccaactggatgagcgctgtggagatactggac
gacgacaatttcctgggcgcggagaatgctttcaacctgtttgtgtgccagaaagacagc
gctgcgaccacggacgaggagcggcagcacctgcaggaggtgggggcgttccacctgggg
gagtttgtgaacgtgttctcccatgggtccctggtgctgcagaacctcggcgagagttcc
acccccacccagggctctgtgctgttcggcacagtcaacggcatgatcggtctggtgacc
tccctgtcagagggctggtacagcctgctaatggacctgcagaacagactcaacaaagtc
atcaagagcgtgggcaagatcgagcacagcttctggaggtccttccacacagagcgcaag
agtgagcaggcgacaggcttcatcgacggggacctgatcgagagcttcctggacctggga
cgggccaagatgcaggaggtggtcagcagcctgcagatcgacgacggcagcggaatgaag
agggaggccacggtggatgaggtgatcaagatcgtggaggagctgacacggatccactag
DBGET
integrated database retrieval system