KEGG   Conger conger (European conger): 133111484
Entry
133111484         CDS       T10633                                 
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
ccog  Conger conger (European conger)
Pathway
ccog03420  Nucleotide excision repair
ccog04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccog00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133111484 (ddb1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    133111484 (ddb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccog04121]
    133111484 (ddb1)
   03400 DNA repair and recombination proteins [BR:ccog03400]
    133111484 (ddb1)
Ubiquitin system [BR:ccog04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     133111484 (ddb1)
DNA repair and recombination proteins [BR:ccog03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      133111484 (ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      133111484 (ddb1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 133111484
NCBI-ProteinID: XP_061077869
LinkDB
Position
15
AA seq 1139 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGENKDLLFILTAKYNACILEYKQNGDNIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQVPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVTHQQLIQITSGSVRLVM
QETKALVSEWKEPQGRNISVAACNSTQVVLAVGRVLYYLEIHRGELKQISSTEMEHEVAC
LDITPLGEGGESPLCAVGLWTDISARILKLPSFSALHKEMLGGEIIPRSILMTTFEGSHY
LLCALGDGALFYFGLDLQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYS
SNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESP
RRICYQEMSQCFGVLSSRVEMQDASGATAAVRPSASTQALSSSVSSSKLFPSSTSLHETS
FGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDPSVYFIVGTAMVYPEEA
EPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT
ECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD
DDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGAFHLGEFVNVFSHGSLVLQNLGESS
TPTQGSVLFGTVNGMIGLVTSLSEGWYSLLMDLQNRLNKVIKSVGKIEHSFWRSFHTERK
SEQATGFIDGDLIESFLDLGRAKMQEVVSSLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgtcttataattacgtggtcaccgcacagaagccgacggccgtcaatgcctgcattacc
ggccacttcacctccgcggaggaccttaacctcctcatcgccaagaacaccaggctggag
atctacgtggtgacagccgagggactgcggccggtgaaggaggtggggatgtacggcaag
atcgctgtcatggagctcttcaggcccaagggcgagaacaaagacctgctgttcatcctg
acagccaagtacaacgcctgcatcctggagtacaagcagaacggggacaatatcgacatc
atcacccgcgctcatggcaacgtgcaggatcggattggccggccctctgagacggggatc
attggcatcgtggacccagagtgccgcatgatcggcctccggctgtacgacggtcttttt
aaggtcatccccctcgaccgagagaaccgcgaactcaaggccttcaatatccgcctggag
gagcttcaggttatcgacgtccacttcctgtacggctgccaggtccccacagtctgcttc
atttaccaggacccccagggtagacatgtgaagacgtatgaagtgtcactgcgtgaaaaa
gagttcaacaagggcccctggaagcaggagaatgtggaggctgaggcgtcgatggtcatc
ccagtcccagagccttttgggggtgctataatcatcgggcaagagtcaatcacctaccac
aacggagacaaatatttggccatagcgccccctaccatcaagcaaagcaccatcgtgtgc
cataaccgcgtggaccccaacggctcccgctacctgctgggggacatggagggccgcctc
ttcatgctgctgctggagaaggaggagctgatggatggagccgtggtgctgaaggacctg
cgggtggagctcctgggagagacgtccatcgccgagtgcctcacgtacctggacaacggc
gtggtcttcgtgggctcccggctcggagactcccagctggtcaagctgaatgtggacagc
aatgaccagggctcgtatgttgctgtgatggagaccttcacaaacctgggacccattgtg
gacatgtgcgtagtggacctggagagacagggccaaggacagctggtcacctgctctggg
gcattcaaggagggatctctgagaatcatccgcaacggcatcggaatccacgagcacgcc
agcatcgacctgccggggatcaaaggactgtggcccttgcgctctgaggccgggcgggag
accgatgacatgctggtgctttccttcgtcggccagaccagggtgctgatgctgagcggg
gaagaggtagaggagactgagctccccgggtttgtggacaaccagcagaccttttactgc
ggcaatgtgacacatcagcagctcattcagattacctccggctcggtgcggttggtgatg
caggagaccaaagccctggtgagcgagtggaaggagccccagggcaggaacatcagcgtc
gccgcctgcaactccacacaggtggtcctggctgtgggccgagtgctgtactacctggag
atccaccgaggagagctgaagcagatcagctccacggagatggagcacgaggtggcctgc
ctggacatcacgcccctcggggagggcggggagtcccccctgtgcgccgtgggcctctgg
acggacatctccgcccgcatcctcaaactcccctccttcagcgccctgcacaaggagatg
ctgggcggagagatcatccctcgctccatcctgatgaccacgtttgagggcagccattac
ctgctctgcgccctgggagatggagctctcttctactttggcctggaccttcagacaggt
gtcctgagcgagcggaagaaggtcaccctggggacccagcccacagtcctccgcaccttc
cgctccctctccacctccaacgtcttcgcctgctccgaccggcccaccgtcatatactcc
agcaaccacaagctggtcttctccaacgtcaacctcaaagaggtcaactacatgtgcccc
ctcaactccgagggctaccccgacagtctcgctctggccaacaacagcacgctgaccatt
ggaaccatcgatgagatccagaaattacacattcgcactgtcccattgtacgagtccccc
aggagaatctgctatcaggagatgtctcagtgtttcggggtgctgtccagccgggtggag
atgcaggacgccagcggggcaacagctgctgttcggcccagtgcgagcacacaggctctt
tccagcagcgtcagctccagcaagctcttccccagcagcacctccctccatgagacctcc
tttggggaggaggtggaggtccacagcctgctggtggtggaccagcacacctttgaagtg
ctccacgctcaccagttcctgcagagcgagtacgctctcagcatggtgtcctgtcggctg
ggcagggacccgtctgtgtacttcatcgttggcacggcgatggtgtatcccgaggaggcg
gagcccaagcagggtcgcatcatcgtctttcactacaccgacggaaagctacagactgtg
gcagagaaggaggtaaagggagcggtgtattccatggtggagttcaacggcaagctgctg
gcgagtatcaacagcactgtgcgcctgtatgagtggacagctgagaaagagctgaggacg
gagtgtaaccactacaacaacatcatggcgctttatctgaagacgaagggtgatttcatc
ctggtgggagacctgatgaggtccgtgctacttctggcctacaagcccatggagggaaac
tttgaggagatcgcccgagactttaaccccaactggatgagcgctgtggagatactggac
gacgacaatttcctgggcgcggagaatgctttcaacctgtttgtgtgccagaaagacagc
gctgcgaccacggacgaggagcggcagcacctgcaggaggtgggggcgttccacctgggg
gagtttgtgaacgtgttctcccatgggtccctggtgctgcagaacctcggcgagagttcc
acccccacccagggctctgtgctgttcggcacagtcaacggcatgatcggtctggtgacc
tccctgtcagagggctggtacagcctgctaatggacctgcagaacagactcaacaaagtc
atcaagagcgtgggcaagatcgagcacagcttctggaggtccttccacacagagcgcaag
agtgagcaggcgacaggcttcatcgacggggacctgatcgagagcttcctggacctggga
cgggccaagatgcaggaggtggtcagcagcctgcagatcgacgacggcagcggaatgaag
agggaggccacggtggatgaggtgatcaagatcgtggaggagctgacacggatccactag

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