Conger conger (European conger): 133111893
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Entry
133111893 CDS
T10633
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ccog Conger conger (European conger)
Brite
Enzymes [BR:
ccog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
133111893 (tdrd12)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Gene silencing
piRNA pathway
133111893 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133111893
NCBI-ProteinID:
XP_061078515
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All DBs
Position
15:7892381..7922145
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AA seq
1536 aa
AA seq
DB search
MPVLKPRIQYEDNSVFSLDSYPTMHISVNTTDQSFSGDPEGVDTMLEISILKIQDPGCFW
GRIVKGDGLKVSSPREYEDLHVRMNLFYHDVNLDVQKIRPPSLAERQVCVVYSPALRCWC
RAVVEAILGTVGSQVMCFLVDHAEHILVSPDSVRAPLEKFLMLPFWVRQFQLAGIRPMRL
LVPVYQEKAKLVPSTHWDSSATRYLHSLVQASSVLEAVLCEVLGDTTAVELYLTVRNVKV
CVNDDLVAKKFACFSSNKSGSSPHDCPDDPSPIMLSCDIFSNGNDFLTQNGLLTQNGCLS
RALCSSISPRKDLLNGAPEASRTVVGGLQRGTEVQCRGTSEPRPQCSEKDAGDLARCAVG
GGAGSDGDVAETDSDSSEKPLAGASSDGGQVDGSYRTLETETQGPLADELLNKLNLFRFM
KLLNPVTKREMAKPQTVREEKTEVDSVKDIPEEDAEVQEISPAPSPEGVSVSAPPPDQVW
YDYLTRRDQLCTVVTIASEEEEEEEEEEEVEEAATASTEQPSLQEELDCTRLLQLLNPDP
LNPDPECLDSAAGAETPCEPSRSGILLHSAIEIDPCTSLARSPITDNIRKALLRKGFSGP
RVGERFCWPAVARGSDTLLISGCGADPLSYVPPLLSHLHLSACSTLTSRTGPVAVILCHG
WEKAQRVFDLLEDIPAAEALHPMIVLVGEKDEAKSVKIQRNCQVLVTTPCSLARLLGFHC
FLFLRLCHLVLDEVELLFSKAPEEMAVALQHFQKAAAGEERGSCCRQVVAVGRQWSRAAE
GLVRQTMSDPTIIITVMEEAALYGGVHQMVLLCLDCTKVSVLLGTLDFTPEVSQKTLIIT
NTVEEVEHVFQAVNNTAAFCLKVHEGLTYQFDFVIEQWRKPIGPGTHVILVMTNACLKPL
AIRDATVVVHYGFPDSPRLFGSRLCCLSQNFQNLSDKDGEQPPRTAKSVLLLSERDARHV
IGVLSYLERAEALLPPELRHFAQGVLQAKEAQKTHRPLCSYLKSFGSCRDSRTCPDRHRL
DPRRDAPQHPESGNVVVVPLYIKNASCYYGRIVSRKEGSYESLAAEMVEYYATEKFNAKE
VVEGGIYGILEDGVYHRVRVLAMPDKGERLFCSVSVCFLDEGREQEVKAHQLLTLPGRLH
SLPPQALEIVVCRAKPIDGEVDWNPKVNRCISQKIKGVEHHAKIVLSLGNTVWLDPMVRI
TRLPGLKTSINEYNVRSEILATGMGCTNPEHLELLRALWQEASASASPGAGEPSPNMQWE
GPEAAQESRLESTAEALADGLQSGREELDEHPTESPPGGPAPPLDSGPPAPLGASATRSG
SALCLGVSVQNGPRAVILGALECEPGPPAVTSLESGVQEKGLTAGPSCSSKAPPAGRPEE
ERLTQTTHFHPHIKWYEREDSVMLNIKLLNPTEQKCEFSSDRVLYSARVGGRRYRADLPL
SGRIVAGACSWEVRGSEPVVRMVKERNGAWNTLLTQKSPFVTFDFDHFEGDEPAVENMAS
ETKPFPVGEKGRCFVESTGEDGCYVRSDCDSETDSD
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgctgaagcctagaattcagtatgaggataattccgtattttctttagacagc
tatcccacgatgcacatatctgtaaatacgactgaccagtctttctcaggcgatccagag
ggagttgacacgatgctggaaatctccatattaaagatccaggatcctgggtgcttttgg
ggccggattgtaaaaggagatgggctgaaggtttcgagccccagagaatatgaggacctg
catgtcagaatgaaccttttctatcacgacgtcaacctggatgtccagaagattaggcct
ccgtccctggcagagcgacaggtctgtgtggtctactctcccgccctgaggtgttggtgt
agagcggttgttgaggcgatcttaggaacggttggctcccaggtcatgtgctttctggtg
gaccatgccgaacacatccttgtaagcccagacagtgtcagagctccgttggagaagttt
ctgatgctgcccttctgggtgaggcagttccagctcgcgggcatccgccccatgaggctg
ctggtgcccgtctaccaggagaaggccaagcttgtgccttcaacccactgggacagttct
gctacacggtacttgcacagccttgtacaagcttcctctgtgctcgaggccgtgttgtgt
gaagtgctgggggacacgacggccgtcgagctttacttaaccgtcaggaacgtaaaggtc
tgtgtgaatgacgacttggtggcaaagaagtttgcgtgcttctcgagcaataaatctgga
tccagccctcacgactgcccggatgatccctcccccatcatgctgtcctgtgacatcttc
tccaacggcaacgacttcctgacacaaaatggcctcctgacacaaaatggctgcctgtcg
cgggcgctgtgctccagcatctctccaaggaaggacctcctgaacggtgccccagaggcg
agtcggacggtggttggtggtttacagaggggcacagaggtgcagtgccggggaacttca
gagcccagacctcagtgctctgaaaaggatgcaggggatctagcacggtgtgccgtgggt
ggaggtgctgggagtgatggagacgtggctgagaccgattctgacagcagcgagaaaccg
ttggctggagcttcttcagatggcggccaggttgatgggagttaccgtacactggaaact
gaaacgcaggggcccttggcagatgaattgctcaataagcttaacttgttcaggttcatg
aagctcttgaatccagtcactaaacgtgagatggcaaaacctcagaccgtccgggaggag
aagaccgaggtggacagcgtgaaggacattccggaagaagacgccgaggtccaggagatc
agcccagctccgagccctgagggcgtctctgtctcagcgcccccacctgaccaagtgtgg
tatgattacttgacccgcagagaccagctctgcactgtggttactatcgcttctgaagaa
gaagaggaggaggaggaggaggaggaggtggaggaggccgccacagcctccacagaacag
ccgagtcttcaagaggagctggactgtacaaggttgttgcagttgctaaatccggaccct
ttgaacccagatccggaatgcttggacagcgcggctggagcagagactccgtgtgagccg
agcaggagtgggattttattgcattctgccattgagattgacccctgcactagcctggcc
cgttctcccatcactgataacatcagaaaggctctgctgaggaagggcttctctgggccg
cgtgtgggtgagcggttctgctggccggcggtggcgaggggctctgacaccctgctgatc
tccggctgcggggcggaccccctctcctacgtccccccgctcctgtcccacctgcacctg
tctgcctgcagcaccctcacctcccgcaccgggcccgtggcggtgatcctgtgccacggc
tgggagaaggcccagcgcgtgttcgacctcctggaggatatccccgctgccgaggccctc
caccccatgatcgtcctggtgggggagaaggacgaggccaagagtgtcaaaatacagagg
aactgccaggtgctggtcaccacgccctgcagcctggcgcgtctgctgggcttccactgc
ttcctgttcctgcggctgtgccacctggtgctggacgaggtggagctgctgttctccaaa
gccccggaggagatggccgtggccctgcagcacttccagaaggcggcggcgggggaggag
aggggctcctgctgcaggcaggtcgtggcggtgggccggcagtggagccgggcggcggag
gggctggtgaggcagaccatgagcgaccccaccatcatcatcaccgtcatggaggaggct
gccctctacggcggggtgcaccagatggtcctgctgtgtctggactgcaccaaggtctcc
gtgctgctcggaaccctggacttcactcccgaagtctcccagaagaccctgattatcacc
aacactgtggaggaagtggagcacgtctttcaggctgtcaacaacaccgcagccttctgc
ctgaaggttcacgagggcctgacctaccagttcgacttcgtcatcgagcagtggaggaaa
ccaatcgggcctgggacgcacgtcattctagtcatgacgaacgcatgtctgaagcccctc
gccatcagggacgccacggtggtggtgcactatgggttccccgactcccccagactgttc
gggagtcggctctgctgcctgtcccagaactttcagaacctctccgacaaggatggtgag
cagccgccccgcacggcgaagtcggtgctcctgctgtcggagagagacgcccggcacgtt
atcggagtgctgagctacctggagcgcgcggaggccctgctccccccagagctccgacac
ttcgcccagggcgtcctacaggccaaggaggcgcagaagacccacaggcccctctgcagc
tacctcaagagctttgggtcctgcagggacagcagaacctgccccgaccggcaccgcctg
gacccccggcgggacgcccctcagcaccccgagtctgggaacgtcgtggtcgtgcccttg
tacataaagaatgcctcctgttactacggacgcattgtgagcaggaaagagggctcgtac
gaaagtctggcggcagagatggtggagtactacgccaccgagaagttcaacgccaaggag
gtggtcgaaggagggatctatgggatactggaggatggcgtctatcacagggtccgggtt
ctggccatgccggataaaggcgagcggctcttctgcagcgtgagcgtgtgcttcctggac
gaggggcgtgaacaggaagtgaaggcccaccagctgctgacgctgcccggccgtctgcac
agcctgccgccccaggccctggagatcgtcgtgtgccgggccaagcccatcgacggggag
gtggactggaacccgaaggtcaaccgctgcatcagccagaagattaaaggggtggagcat
catgccaaaatagttctgagcttgggcaacaccgtctggttggatccaatggttcgaatc
actcgtctgcccggtctgaagacctccataaatgagtacaacgtgcgctctgagatcctg
gccactgggatgggctgcactaacccagaacatctggagctcctgagggcgctgtggcag
gaggcatctgcctctgcttcccctggtgctggagagcccagccccaacatgcagtgggag
ggcccagaagcagcccaggagagcaggctggagagcactgcggaggccctggcagacggt
ctgcagtcaggccgagaggagctggacgaacaccctactgagagccctcctgggggcccg
gcacctccgctggacagtgggcccccggcccccctgggggcctctgcgaccaggtcaggg
tcggcactgtgtctgggtgtttctgtgcagaacgggccccgtgctgtcattttgggggcc
ctggagtgtgagccggggccccctgccgtcacctccctggagagtggggtgcaagagaag
gggttaacagcagggccgtcctgcagctccaaagcgccccctgcaggccgtccagaagag
gagcggctcacccagaccacacatttccacccacacatcaagtggtatgagagggaagac
tctgtcatgctgaacataaaactcctgaaccccactgagcagaagtgtgaattctcctct
gatagagtgctgtacagcgcccgtgtcggcggccggcgttaccgtgccgacctgccgctg
agcggacgcatcgtggccggcgcgtgctcctgggaggtgaggggcagtgagcccgtggtg
cggatggtgaaggagcggaacggggcctggaacacgctgctcacacagaagagccccttc
gtcacctttgactttgaccactttgagggggacgaaccagccgtggagaacatggcttct
gaaactaaacctttcccagttggtgaaaagggtcgctgctttgtggagtccactggagaa
gacggctgctatgtgagatcagactgtgacagtgaaactgacagtgactga
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integrated database retrieval system
