Conger conger (European conger): 133112110
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Entry
133112110 CDS
T10633
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ccog Conger conger (European conger)
Pathway
ccog03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133112110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133112110
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
133112110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
133112110
NCBI-ProteinID:
XP_061078793
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Position
15
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AA seq
716 aa
AA seq
DB search
MSAEVTPDQATEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVH
SIYNRLLAMEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDMRTRHHVYVSAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVERRRFTAFREEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLTALIPEAVVTPSVPTLKDEADRKPEYPKPDTNQMIPFQPRHLAPPG
LHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVEELMESFRRCTLPESVDLAVELITG
RQPELGSEGNGPLEHGAIVSKSLKRPNADSDEEEEKGAVAPPVHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggtaacacccgatcaggccacagagtacatcccggagaaggtgaagaaa
gcagagaagaagttggaagagaacccttatgaccttgacgcttggagcattctgattcga
gaagcacagaaccaacctatagacaaagcgaggaagacttacgagcgacttgtcgcccag
ttcccaagttctggcagattctggaagctatacattgaagccgagatcaaggcaaaaaat
tatgacaaagttgagaagctgtttcagcggtgcctcatgaaggtactacacatcgacctg
tggaagtgctacctgtcctacgtgcgcgagaccaaaggcaagctgcccagctacaaagag
aagatggcgcaggcctatgactttgccttggataaaatcggaatggagatcatgtcctat
cagatatgggtggactacatcaactttctcaaaggagtcgaggcggtgggctcgtacgcg
gagaaccagcgaatcacggccgtgcgtcgggtctaccagaggggctgcgtcaaccccatg
atcaacatcgagcagctctggagggactacagcaagtacgaggagggcatcaacgtgcac
ctggccaagaagatgatcgaggaccgcagcagagactacatgaacgcccggagggtggcg
aaggagtatgagacggtgatgaaggggctggacaggaacgccccgtcggtgcccccccaa
aactcccctcaggaggcccagcaggtggagatgtggaagaagtacatccagtgggagaag
agcaacccactgcgcacggaggaccagaccctcatcaccaagagggtcatgtttgcctat
gagcagtgccttctggtgttgggacaccatccggatatctggtacgaggcagcacagtat
ctggagcagtccagcaagctcctggcagaaaagggggacatgaacaacgccaagctgttc
agcgacgaggcggccaacatctacgagcgcgccatcggcaccctgctgaagaagaacatg
ctcctctacttctccttcgccgactacgaggagagtcgaatgaaacacgagaaggtgcac
agtatatacaaccggctcctggcgatggaggacatagacccaacgttggtttacatccag
tacatgaaatttgcgaggagagcagaggggatcaaatcgggccggaccatcttcaagaag
gcccgtgaggacatgcggacgagacaccacgtctacgtttcagcagccctgatggagtac
tactgcagcaaggataaatcggtggcctttaagatatttgaactcggcctgaagaaatac
ggtgacataccagagtacatcctggcatacattgattacctctctcacctcaatgaggac
aataacaccagggttctgttcgagagggtgttgacatcgggaagcttgccccctgaaaaa
tcaggagagatctgggcccgcttcctggccttcgagagcaacatcggcgacctggccagc
atcctgaaggtggaacggcggaggttcacagctttcagagaggagtacgagggcaaggag
accgccctgctggtggaccggtacaagttcatggacctgtacccctgctctgcgagtgag
ctcaaagccctgggctacaaggacgtgtcccgtgccaaactgacagccctcatccccgag
gcggtggtgaccccctccgtgcccacactgaaggacgaggcggaccggaaaccagagtac
cccaaacccgacaccaaccagatgatccccttccagccccgccacctggcgcctccagga
ttgcaccctgtgccaggaggggtgttcccagtgccgcccgctgccgtcgtcctcatgaag
ctgctgcccccgcccacctgttttacggggccctttgtccaggtggaggaactgatggag
tcgttcagacggtgcacacttcccgaaagtgtggacctggcagtggagctgatcacaggc
cggcagccggagctgggcagcgaggggaacgggcccctggagcacggggccatcgtcagt
aagtctctgaagcgccccaacgccgactcggacgaggaggaggagaagggtgcggtggca
ccccctgtgcacgacatctacagggcccgtcagcagaagaggatccgatga
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