Conger conger (European conger): 133113891
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Entry
133113891 CDS
T10633
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
ccog Conger conger (European conger)
Pathway
ccog03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133113891 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccog03009
]
133113891 (utp18)
Ribosome biogenesis [BR:
ccog03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133113891 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
WD40
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_IFT122_1st
DUF7165
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Cytochrom_D1
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
KNTC1_N
PD40
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_WDR75_1st
WD40_like
Beta-prop_IFT140_2nd
DUF5845
Pox_D5
Motif
Other DBs
NCBI-GeneID:
133113891
NCBI-ProteinID:
XP_061079000
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Position
16:13276145..13287980
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AA seq
530 aa
AA seq
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MDETSPNPASRGKVLKRAPSAIVDSAEPTEESKRQKHLEKARALGEKDESEKLLEDLVFG
AEDKLVEKLTWKDEVGSSLLEEESSDSEVENEARLEVPAARRAVWDDDDDDEDASADAEV
DMTHKYRRDFMKGDAEKTLSKQKLQQRLQEQFRRAMGGTPSWAEKGVKNKRKDKKNADDD
DDDDDDEDDDLLRKTGNFVASSESLPKGIIQIKKCLEANNDRPAEGRLTSVQFHPSAQVV
MTAGVDQNISLFQVDGKSNPKIQSLHLENFPVHKAQFSADGEQVIATSNYNKLFYVYDMM
EGKVIPVYMVRGLNEKKVKEFQVSPDGMFLLLSGTSGYLHLVTMKSKELVRSFKINGEVA
GAAFSQDGSRIYVSSDEGEVFIWDLKRNKCLNRFTDDGSLRGTSIAVSKNGQYIACGSSS
GVVNVYDHDACLQESNPKPLRAIMNLLTPATSLRFNATTEILAIASNTADEAVRLVHVPS
FTVFSNFPVSKRSFLFHPQCLDFSPNSGFLSVANDKGRALLYRLKHYSDF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaccagtccaaaccctgcatctaggggcaaagttttgaaaagagcgcccagt
gccattgtggacagtgcagagcccaccgaagagtccaagagacagaaacacctcgaaaaa
gcgagggcgttgggcgaaaaggacgaatctgaaaagttgcttgaagacctggtgtttggt
gctgaggacaagctggttgaaaaactgacttggaaggatgaagtgggcagcagccttctt
gaggaagagtcaagcgattcagaagttgagaatgaagcacgactcgaggttcctgccgcc
aggagagctgtctgggatgatgatgacgacgatgaagacgcttcagcggatgcagaggtg
gacatgacccacaagtaccgccgagattttatgaaaggcgatgccgaaaaaactctctcc
aagcagaaactgcagcagaggctccaagaacagttccggagggcaatgggtggaactcca
tcatgggcagagaaaggggtgaaaaacaagaggaaagataagaagaatgctgacgatgac
gacgacgatgatgatgatgaagatgacgacttgttgcgtaaaacggggaactttgtggcc
tcatcagaaagccttcccaaaggaatcatacagatcaagaagtgcttggaagccaacaat
gaccgtcccgcggaaggccggctgacctcagtacagtttcacccctcggctcaggtcgtc
atgacggcaggagtggaccagaacatcagtctcttccaggttgatgggaaaagcaacccc
aagatccagagcctccatctggagaatttcccggtgcacaaggcccagttcagcgcagac
ggggagcaagtgatcgccaccagtaactacaacaagttattctacgtctacgacatgatg
gaggggaaggtcatccctgtgtacatggtcagaggtttaaatgagaaaaaagtgaaggaa
ttccaggtttctccagacgggatgttccttctgctcagtgggacctctggatatcttcac
ctggttaccatgaagtctaaagaactggtccgaagcttcaagatcaacggggaagtcgcg
ggagcagccttctcgcaggacggcagcagaatatacgtcagctcagatgaaggagaggta
ttcatttgggatttgaaaaggaacaagtgcttaaaccgattcacggacgacggctcgtta
aggggaacctcgattgctgtgtccaaaaacgggcagtatatcgcttgtgggtcgagctct
ggcgtggtgaacgtgtacgatcacgacgcctgtctgcaggagtccaaccccaagccgctg
agggccatcatgaacctgctgacgcccgccacctccctgcgcttcaacgccaccaccgag
atcctggccatcgcctccaacaccgcggacgaagccgtccggctggtccatgttcccagc
ttcacggtcttctccaatttccctgtgtccaagcggagcttcctgttccacccgcagtgc
ctagacttctccccaaacagcggcttcctctctgtggccaacgacaagggcagggcccta
ctctaccggttgaaacattactcagacttttag
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