Conger conger (European conger): 133113992
Help
Entry
133113992 CDS
T10633
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ccog Conger conger (European conger)
Pathway
ccog00260
Glycine, serine and threonine metabolism
ccog00630
Glyoxylate and dicarboxylate metabolism
ccog00670
One carbon pool by folate
ccog01100
Metabolic pathways
ccog01200
Carbon metabolism
ccog01230
Biosynthesis of amino acids
ccog01240
Biosynthesis of cofactors
ccog04981
Folate transport and metabolism
Module
ccog_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
133113992 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
133113992 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
133113992 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
133113992 (shmt1)
Enzymes [BR:
ccog01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
133113992 (shmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
133113992
NCBI-ProteinID:
XP_061079169
LinkDB
All DBs
Position
16:12247333..12258741
Genome browser
AA seq
483 aa
AA seq
DB search
MALSNGTHLSKETWKSHNQMMLEPLSTNDAEVYEIIKKEKKRQKYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTECVDDLERLCQNRALEVFRLDPAKWGVNVQPYSGS
PANFAVYTAIVGSHGRIMGLDLPDGGHLSHGFMTNKKKISASSVFFESMPYRVNPDTGLI
DYDRLEENARLFHPKLIIAGASCYARTIDHSRLRKIADENEAFLMSDMAHVAGMVAGGVM
ESPFDHADVVTTTTHKTLRGCRSGLIFYRKGVRSVDPKTGKETLYDLENPINQAVFPGLQ
GGPHNHAIAGIAVALKQALTPEFKAYQAQILANCKALAAAMLEKGYKLVTGGSDNHLILI
DFRTQGTDGGRVEKVLEACAIACNKNTCPGDKSALRPSGIRLGTPALTSRGLLEDDFRKV
AEYIHRGIALTLEFQLNLSPKATLKEFKEKLVQDEKWQMKIKEIREEVEAFSAKFPIPGL
PEL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccctcagtaacggcactcacctgagcaaggagacatggaaatctcataaccaaatg
atgcttgaacctctcagtaccaatgatgcggaggtatatgaaattatcaagaaagagaag
aaaaggcagaagtatggtttggagctgattgcctctgagaactttgcgagccgggcggtc
ctggaagccctgggctcttgcatgaataacaagtactctgaggggtaccctggtcaaaga
tattatggtgggacggagtgtgttgatgatctggagaggctatgtcagaacagagccctc
gaggtgttccgcctggacccggccaagtggggcgtcaacgtgcagccatattccggcagc
ccggctaactttgccgtgtacaccgcgatcgtggggagccacggccggatcatgggtctg
gacctcccggatgggggtcacctgagccacggtttcatgaccaacaagaagaaaatctct
gcgtcctccgtcttctttgagtccatgccatatagggtaaacccagacactggtttaatt
gactatgatcggctggaggagaatgctcgcctgttccaccccaagttgatcattgctggt
gccagctgttacgcccgtaccattgaccacagcagactgcgcaagatcgcagacgagaac
gaggcgttcctcatgtcagacatggcccacgtcgccggaatggtggctggcggggtgatg
gagtctccgttcgaccatgccgacgtggtcaccaccactacccacaagaccttgaggggc
tgtaggtctggtctcatattttacagaaaaggggtgcgcagtgttgatccaaaaactggt
aaggagaccctgtacgacctggagaatccaatcaaccaggctgtgttcccaggcctgcaa
gggggaccacacaaccatgccattgcaggaattgctgtagctctgaagcaggcactgact
cctgaattcaaagcgtatcaggcccaaattctggccaactgcaaagccctggcagctgca
atgctagagaagggttataagcttgtcacagggggctctgacaatcacctcatcctaatt
gacttccgtacacagggaactgatggtggcagggtggagaaggttttggaggcctgcgct
attgcctgcaacaaaaacacctgcccaggagataaaagtgcccttcgccccagtggcatt
cgtttgggaacgccggcactcacctccagaggacttctggaagacgatttccgtaaggtc
gccgagtacatccacagaggtattgcgctgacgttggagtttcagttgaacctgagcccc
aaggctactctaaaggagttcaaggaaaagctggtgcaagatgagaaatggcaaatgaag
attaaggaaatccgagaggaggtcgaagccttttccgcaaaattccccatacctggactt
ccagaactctaa
DBGET
integrated database retrieval system
