Conger conger (European conger): 133114038
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Entry
133114038 CDS
T10633
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ccog Conger conger (European conger)
Pathway
ccog04010
MAPK signaling pathway
ccog04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133114038
04020 Calcium signaling pathway
133114038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccog04040
]
133114038
Ion channels [BR:
ccog04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133114038
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133114038
NCBI-ProteinID:
XP_061079218
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Position
16:11581323..11638833
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AA seq
1714 aa
AA seq
DB search
MVVCNPWFEYMSMLVILLNCVTLGMFQPCEFKWSTILQVFDDFIFAFFAVEMVLKMLALG
IFGSKCYLGDPWNWLDFFIVMAGMLEYSLEGHYATSAIRTVRVLRPLRAINRVPSMRMLV
TLLLYSLSMLGNILLLCFFVFFIFGIVGVQLWAGLLRNRCFLQDDLKTEYNLSHLSPYYR
QEEGQESPSICSTASHNGMLRCHNLPPLKQDKVECRLNVSHQNLAMYGLDGAGRNSCINW
NQYYNQCKPGDHNPDKEAVNFDNIGYALIVIFQVITLEGWVDIMYYVMNAHSFYNFIYFI
LLIIVGSFFMISLCLVVITTQFSETKQRENRLMQQQRARFRSNDSTLASFSEPGSCYEEM
LRYIGHLYRKVKRRLLRLYSSWQSKRRKKVNPNGDGGVWGAGGGANGRSRRRWNQSIHHL
INHHHLHHHHLSNGTPCGEVVDMVEMKPLVAPPELRLPALSDDPPAPPAGAESVSGAAED
NEGLLQVPQANNSPSGALLGRVNGGMNYPTIRPSLICPSTALSPRARGRRVANHLMSLTL
SVGEYAHGRSGLPMEGVVVGADLLNCPYCVQALENPDLELNESDSGVSAADGINEFTQDR
CRGNEGRPGRSHSQRRRAQVRDRNCLAFCWEVFRKKLECIVKSKYFNHGIMIAILINALS
MGIEYHQQPEELTELLEISNIFFTSMFALEMVLKLLAFGFIGYIRNPYNIFDGIIVVISV
WEIMGLSVVRTFRLLRVLTQVRFLPTLRRQLVVLKKTMDNVATFCILLMLFIFIFSILGM
HLFGCKFSLKTENGDTLPDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTSPWAALY
FVALMTFGYYVLLNLLVAILVEGFQAEEDARRSDTDNERISANFEEVKIREIQATELNMC
ALMMTANGYADPRASVATPMPTPKSSLGTDSAHAFVESRRGSNTSIDPTFDQKSLSSLRS
PPGGPWGAGSNWGSRRSSWNSLSRGPSLKRKDPSGERESLLSGEGQGSSEEDSSDGGMSS
VGDRARSPEPPEPPEPLQVPMSRQDCNGRTQHHSTQDDVSDHIISSVVIINSDPQIKIAS
SFCLRIRKSLETHKPQFCRQREDWSLYLFSPQNQFRVAFQRVIAHKMFDHIVLVFIFLNC
TTIALERPNILSTERAFLTMSNYIFTVIFVAEMIMKVVAHGFFSGTDSYLQSGWNILDGV
LVFVSLVDILVSVASDGGNRILGILRVLRLLRXARDLRVISRAPGLKLVVETLITSLRPI
SNIVLICCAFFIIFGILGVQLFKGKFYHCEGPDMRNVTNRSDCELSTKNRWIRRKFNFDN
LGQALVTLFVLSTLDAWVDVMYDGLDAVAVDVQPRRNHNPWMLLYFISFLLIVSFFVLNL
SVGVVMVNFHKCRQHQEEEEARLREEKRLKRLEKRRRKAQQRPYYAGYSPVRLYIHTLCT
NHYLDLFITFIIAINVVTMSMEHYNQPPYLEEVLKYCNYGFTITFILEALLKLVAFGFTR
FLKDRWNQLDLAIVGLSIMGITLEEIKNSAALPIKPPIICIMRVLRIARVLKLLKKATGM
QSLLDTVMQALPQVWNLGLLFMLLFSLYAALGVELFGKLATMKCNEEFESLGSDATFENF
GMALLTLFRVFTGDNWSAIMKDTLGDCGLPYLRFISPVYFITFVLIAQFLLFNMVVAMVE
ENYKKTISYYKGDQPNPQQTHQSGLSENLTGVVG
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggtggtttgtaacccgtggttcgagtacatgagcatgctggtcatcctcctgaactgt
gtgaccctgggaatgttccagccctgtgagttcaaatggtccaccatcctgcaggttttt
gatgacttcatttttgcgttctttgctgtggagatggtcctcaaaatgttggcgctaggg
atttttgggtctaaatgttacctgggcgacccatggaactggcttgacttctttatcgtc
atggccgggatgttggagtactcgctggaaggccactacgccacatcagccatccgcacc
gttcgtgtgctccgccccctccgcgccatcaatagagtccccagtatgagaatgctggtg
acactgctcttatactcgctgtcgatgctggggaacatcctgctcctctgcttctttgtc
ttcttcatcttcggcatcgtgggggtgcagctctgggccgggcttctgaggaaccgctgc
ttcttacaggatgatctgaagacggagtacaacctgtcgcacctgagcccgtactacagg
caggaggagggccaggagagcccctccatctgctccaccgccagccacaacggcatgctg
cgctgccataacctcccccccctcaagcaggacaaggtggagtgccgactcaacgtctcc
caccaaaacctggccatgtacgggttggacggggccggccggaacagctgcatcaactgg
aaccagtattacaaccagtgcaagccgggggaccacaaccccgacaaggaggccgtcaac
ttcgacaacatcggatacgcgttgattgtcattttccaggtcataaccttggaaggatgg
gtggacatcatgtattatgtaatgaatgcgcattccttttacaactttatttattttata
ttgctcataatagtgggctccttcttcatgatcagcctgtgcctggtcgtgatcaccacc
cagttctcggagaccaagcagcgggagaaccggctgatgcagcagcagcgggcgcgcttc
cgctccaacgacagcacgctggccagcttctcggagccgggcagctgctacgaggagatg
ctgcgctacatcggccacctgtaccgcaaggtgaagcggcgtctgctgcgcctctacagc
agctggcagagcaagcggaggaagaaagtcaaccccaacggtgacggcggggtctgggga
gcgggcggcggggccaacgggcgcagcaggaggaggtggaaccagtccatccaccacctc
ataaatcaccatcacctccaccaccatcacctcagcaacggcacgccctgcggagaggtc
gtggacatggtggagatgaagcccctggtggcaccgcccgagctgaggctgccagccctg
tccgacgaccccccggcccctccagcgggggccgagtcagtttccggggcggccgaggac
aacgagggcctcctgcaggtcccacaggccaacaactccccttcaggagcgctactgggg
agagtcaatgggggcatgaactaccccaccatccggccctctctcatctgcccctccact
gccctcagccccagggcccggggcaggagggtggccaaccacttgatgagcctgaccctg
agcgtgggggagtatgcccatggccggtccgggctgcccatggagggcgtggtggtgggc
gcagacctgctgaactgcccctactgtgtccaggcactggagaaccccgacctggagctc
aatgaatcggacagcggcgtctccgcagctgacgggataaacgagttcacccaggaccgc
tgccgtggcaacgagggtcgcccagggcgctcccatagccagcggcgacgagcacaggtc
cgggacaggaactgcctggccttctgctgggaggtcttccgcaagaagctggaatgcatt
gtgaagagcaagtacttcaaccacgggattatgatcgccatcctcatcaacgcactcagc
atgggtatcgagtaccaccagcagcctgaggagctgacagaactcctggagatcagcaac
atcttcttcaccagcatgtttgccctggagatggtgctcaagctgctggccttcgggttc
atcggctacatcagaaacccctacaacatcttcgacgggatcatcgtggtcatcagtgtg
tgggagatcatgggcctatcggtggtcagaaccttccggctccttcgcgtactgacacag
gtacgcttccttcccacccttcggcggcagctggtggtgctgaagaagaccatggacaac
gtggccaccttctgcatactgcttatgctctttatcttcatcttcagcatacttggaatg
catctgtttgggtgcaagttcagcctgaagacagagaatggagacacactcccagacagg
aagaattttgactcgttgctgtgggcgattgtcactgtgttccagatcctaactcaggag
gactggaacatggttctgtataacgggatggcctccacctccccctgggctgctctgtac
ttcgtggccttgatgacctttgggtactacgtcctgttaaacttgctggtggccattttg
gtggaaggttttcaagcagaggaagatgcaagaaggtcagacacggacaatgagagaatt
tcagcaaattttgaggaggtgaaaattagggagattcaagccacagagctgaatatgtgt
gcactgatgatgacagccaatgggtacgcagatccacgtgccagcgtggccacacccatg
cccacgcccaagagctccctgggaacagactcagcccacgcctttgtcgagtcacggcga
ggcagcaacacgtctatcgaccccacctttgaccagaagtccctgtccagcctgcggagc
ccccccggggggccctggggtgcgggcagtaactggggcagccggcggtccagctggaac
agcctgagccgtgggccgagcctgaagcggaaggacccgtcgggggagcgtgagtccctg
ctgtcgggcgagggccagggcagctcggaggaggacagctcagacggtgggatgtccagt
gtgggggaccgggcccggtcccctgaaccccccgaaccccccgagcccctgcaggtcccc
atgtcgcgccaagactgcaacggccgcacccagcaccactccacccaggacgacgtgagc
gaccacatcatctctagtgtagtgatcatcaactctgaccctcaaatcaaaatagccagt
agcttctgcttgcgtatccggaagtcgttggagacccataagccccagttctgccgtcag
cgtgaagactggtccctgtacctgttctccccacagaaccagtttcgtgtcgccttccag
agggtcatcgcacacaagatgtttgatcacatcgtgctggtgtttatcttcctgaactgc
accaccattgcactggagaggcccaacatcctcagcacggagcgtgcatttctcaccatg
tcaaactacatcttcactgtgatctttgtagcagagatgattatgaaggtggtggcgcac
ggattcttttcagggacggacagctacttgcagagtggctggaacatcctggatggtgtg
ctggtcttcgtctccctggtggacatcctggtgtccgtggcatcagacggcgggaaccgg
attttgggaattttgcgggttctgcgtttgctcaggtgagcacgtgacctcagggtgatc
agtcgagctcctggcctgaagcttgtggtggagacactgatcacatcgctgcgaccgatc
agcaacattgtgctcatctgctgtgcgttcttcatcatcttcggcatcctgggggtgcag
ctgttcaaggggaagttttatcactgtgagggaccagacatgaggaacgtcaccaacagg
tccgactgcgagctatcaactaagaatcgctggatcagacggaagttcaactttgacaac
cttggacaggccctcgtgacactgttcgtcctctcaacattggatgcgtgggtggacgtc
atgtatgacgggctggacgccgtagcagtggacgtgcagccaaggcggaaccataacccc
tggatgctactgtacttcatctccttcctgctcatcgtcagcttctttgtgctaaacttg
tctgtgggtgtggtgatggtgaacttccacaagtgccggcagcaccaggaggaggaggag
gcgcggctgcgggaggagaagaggctgaaaaggctggagaaaaggcgcaggaaagcccag
cagcggccgtactatgccggctactcccccgtccgtctctatatccacacactgtgcacc
aaccactacctggacctcttcatcaccttcatcatcgccatcaacgtggtcaccatgtcc
atggagcactacaaccagcccccgtaccttgaagaggttctgaaatactgcaactatggc
ttcaccatcaccttcatccttgaagctctgctcaagctggttgcttttggcttcaccaga
ttcttgaaagacaggtggaaccagctggatctggccattgtggggctttccatcatgggg
atcactctggaggagatcaaaaacagtgctgccttacccattaaaccccccatcatctgc
atcatgagggtcctgcgcatcgctagagtgctgaagcttttgaaaaaagctacagggatg
cagtctctgctggacacagtgatgcaagccttgccacaggtgtggaatttgggtctgctc
ttcatgttgctgttctctctatacgctgcactgggtgtggagctctttgggaaactggct
acaatgaagtgcaatgaagaatttgagagtctgggcagtgacgccacatttgagaacttt
gggatggccttgctcacccttttcagggtatttacaggggacaactggagcgccatcatg
aaggacacgctgggggactgcggcctgccctacctacgcttcatctccccggtctacttc
atcaccttcgtgctgatcgcccagttcctgctgttcaacatggtggtggccatggtggag
gagaattacaagaagactatatcctattacaaaggagaccagcccaatccccaacaaact
caccagtctggcctgtcagaaaacctgacgggagttgtgggttga
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