Conger conger (European conger): 133114339
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Entry
133114339 CDS
T10633
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ccog Conger conger (European conger)
Pathway
ccog03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133114339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccog03021
]
133114339
03036 Chromosome and associated proteins [BR:
ccog03036
]
133114339
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133114339
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
133114339
Chromatin remodeling factors
BAF complex
133114339
PBAF complex
133114339
GBAF(ncBAF) complex
133114339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
133114339
NCBI-ProteinID:
XP_061079611
LinkDB
All DBs
Position
16:complement(21602242..21626663)
Genome browser
AA seq
1617 aa
AA seq
DB search
MSTPDPPIGGPPRPGPSPGPGPSPGAMMGPSPGPSPGSTHSMMGPSPGPPSSGHPLPPQG
PSGYPPENMHPMHKPMEGMHEKGMAEDPRYAQMKGVGMRPGGLSGMGPPPSPMDQHSQGY
PSPLGGSDHAPSPVPANGPPSAPMMPSAPGGMPMDGGAGGGGGGGGDPQAMGQQNRGGAP
GGVQGGPGGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQPMTN
MPPAPGPGAGPTPANYSRLHGAVGPNMPPPGPSGVPPGMQGPPPNGPPKTWPEGPMVNAA
APSSAPQKLIPPQPSGRPSPAPPSVPPAASPVMPPQTQSPGQPSQPPPMVLHQKQNRVTP
VQKPRGLDPVEILQEREFRLQARIAHRIQDLENLPGSLAGDLRTKANIELKALRLLNFQR
QLRQEVVVCMRRDTALETALNGKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQE
YLNSILQHAKDFKEFHRSITGKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAED
EEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKKKKKKKPENAEG
MISGLGPDGEPLDETSQMSDLPVKVIHIDSGKILTGMDAPRAGQLEAWLEVNPGYEVAPR
SDSEDSGSEEEEDEEEEPQSSQALVEEKKKIPDPDNEDVSEVDVLHIIEHAKQDVDDEYG
SAAFARGLQSYYAVAHAVTERVDKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMENKRINGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRNGKFNVLLTTYEYIIKDKQILAKIRWKYMIVDEGHRMKNHHCRLTQVLNTH
YLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGIVQGGDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAFRNFKYLRLDGTTKAEDRGMLLK
TFNDPASQYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQTNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEE
DEVPDDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEEDELPTWIMKDDAE
VERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRHKKTTRKR
KRDRDLDLPGPAPASASTPRPREKDEETKKQKKRGRPPAEKLSPNPPALTKKMRKIVDAV
VKYKDGSNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRSLNDLEKDV
MLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEDSEGDDSEEEEEEADEGSESE
SRSVKVKIKLGRKEKGLERAKGRRRMGRGSRAKPVVSDDDSEEEQEEERSASGSEED
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccccggacccccctatcggagggcccccacgccccggcccttccccgggcccc
ggcccctcccccggggccatgatgggcccaagccctggcccctctcctggctccacccac
agcatgatggggcccagcccggggcccccctcctcaggacacccgctccccccacagggc
ccctcagggtaccccccggaaaacatgcaccccatgcacaaacccatggagggtatgcat
gagaagggcatggcggaggacccccgctacgctcagatgaagggggtgggcatgcggcca
ggggggctcagcggcatgggacccccgcccagccccatggaccaacattcccaaggttac
ccctctcctttggggggttcggaccacgctcccagccccgtccccgctaacggccccccc
tctgctcccatgatgccctctgcccctggcgggatgcccatggacgggggcgccggcggc
gggggtggcggcgggggcgacccccaggccatgggccaacagaaccggggcggggccccc
ggcggggtgcaggggggccctggagggcccacgcccttcaaccagaaccagctgcaccag
ctgcgggcccagatcatggcgtataagatgctggcgcgtgggcagccgctcccggaccac
ctgcagatggccgtgcagggcaagcggcccatgccgggcatgcagcagcccatgaccaac
atgccccccgccccggggcctggtgccggccccactcccgccaactacagccgcctgcac
ggagcagtgggccccaacatgcctcccccggggccctctggggtgcctccgggaatgcag
gggccgccccccaacggacctcctaaaacctggccagaagggccgatggtgaatgcagcc
gccccctccagcgcccctcagaagctcatccctccacagccgtcgggccgaccctccccc
gccccgccctccgtacccccggctgcctcccccgtcatgcccccccagacccagtcgccc
gggcaaccctcacagcccccgcccatggtgctgcaccagaagcagaaccgcgtcacgccc
gtgcagaagccccggggcctggaccctgtggagatcctgcaggagcgcgagttcagattg
caggcacgcatcgctcaccgcatacaggacctggagaaccttccgggctccctggctgga
gacctgaggaccaaagccaacattgagctgaaagccctcagactgctcaacttccagaga
cagctgcgtcaggaggtggtggtgtgcatgcgcagagacacggccctggagacggcgctc
aacggcaaggcctacaagcgcagcaagaggcagtctctacgcgaggcgcgcatcaccgag
aagctggagaagcagcagaagatcgagcaggagcgcaaacgccggcagaaacaccaggag
tacctgaacagcatcctacagcatgctaaggactttaaggagttccaccgctccatcacc
gggaagatgcagaagctgaccaaggccgtggccacgtaccacgccaacactgagcgcgag
cagaagaaggagaatgagcgaatcgagaaggagaggatgaggaggctgatggctgaggat
gaggagggctacaggaagctgattgatcagaagaaggacaagcgcctggcctacctgctg
cagcagacagacgagtacgtggccaacctgacggagctggtgcgcgctcacaaggccgtc
caggccctcaaggagaagaagaagaagaagaaaaagaagaagccggaaaatgcagaaggg
atgatctccggcctggggcctgatggagagcccctggacgagaccagccagatgagtgac
ctcccggtgaaggtcatccacatcgacagcggcaagatcctgacgggcatggatgcgccc
agggcggggcagctggaggcctggctggaggtgaacccagggtacgaagtggcccccagg
tccgacagcgaagacagtggatctgaggaggaggaggacgaggaggaggagccccagtct
tcccaggctcttgtggaggagaagaagaagattccagacccggacaacgaggacgtgtcc
gaggtggacgtgcttcacatcatcgaacatgccaagcaggacgtggacgacgagtacggc
agtgcggccttcgcccgggggctgcagtcgtactacgccgtggcccacgctgtcaccgag
agggtggacaagcagtcctctctgctgatcaacgggcagctcaaacagtaccagattaag
ggtttggagtggctggtgtctctgtacaataataacctgaacgggatcctggctgatgag
atgggtttggggaagactatccagaccatcgccctcatcacttacctcatggagaacaag
cgcatcaacgggcccttcctcatcatcgtgcccctctcaacgctctccaattgggtgtac
gagtttgacaagtgggcaccatctgtggtgaaagtgtcttacaagggatctcctgctgct
agacgagcctttgtgcctcagctgcgcaatgggaaattcaacgtgctgctgaccacctac
gagtacatcatcaaggacaagcaaatattggccaagatccgttggaagtacatgattgtg
gacgagggccatcgaatgaagaaccaccactgcaggctgacgcaggtgctgaacacacac
tacctggccccgcggcgtgtgctcctgaccgggacccccctgcagaacaagctgcccgag
ctctgggccctgctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcccccttcgccatgaccggggagaaggtggatctgaatgaagaggag
acaatcctgattatcaggcgtctgcacaaggttctcaggcccttcctcctccgccggcta
aagaaggaggtggaggctcagctgcctgagaaggtggagtacgtcatcaagtgtgacatg
tccgccctgcagagggtcctgtaccggcacatgcaggccaagggggtcctgctcactgac
ggctccgagaaggacaagaagggtaagggaggcaccaagaccctgatgaacacaatcatg
cagctcaggaagatttgcaaccacccctacatgttccagcaaatcgaggaatccttctct
gagcacttgggatttactggcgggatcgttcaagggggtgacctgtatcgtgcttctggg
aagtttgagctgctggaccggatcctgcccaaactgagggccacaaaccacaaggtgctg
ctcttctgccagatgacctcactcatgaccatcatggaggactacttcgccttccgaaac
ttcaagtacctgcgtctggatggtaccacgaaagctgaggaccgaggcatgctgctgaag
accttcaacgaccccgcgtctcagtacttcgtcttcctcctcagcacccgagcagggggg
ctgggcctcaacctgcagtcagccgacaccgtagtcatcttcgacagcgactggaacccc
caccaggacctgcaggcccaagacagggcccaccggatcggacagacgaacgaggtgcgc
gtgctgcgcctctgcaccgtcaacagcgtggaggagaagatcctggcagccgccaagtac
aagctgaacgtggaccagaaggtcatccaggccggcatgttcgaccagaagtcctccagc
cacgagcggagggccttcctgcaggccatcctggagcacgaggagcaggacgaggaggag
gacgaggtgccggatgacgagacggtgaaccagatgatcgccagaagtgaggaggagttt
gaccacttcatgcgcatggacctcgaccggcgcagggaggaggcgcggaaccccaagcgc
cggccgcggctgatggaggaggacgagctgcccacctggatcatgaaggacgacgccgag
gtggagcgcctcacctgcgaggaggaggaggagaaaatgtttggccgcggctcccgccag
cgcaaggaggtggactacagcgactcgctcaccgagaagcagtggctcaaggcgatagag
gagggcacgctggaggagatcgaggaggaagtgcggcacaagaagacgacgcgcaaacgc
aagcgggaccgcgacctggacctgcccggcccagccccggccagcgcctccacgccgcgc
ccgcgcgagaaggacgaggagaccaagaagcagaagaagcgcggccgcccccccgccgag
aagctttcgcccaaccccccggccctcaccaagaagatgaggaagatcgtcgacgccgtc
gtcaagtacaaagacggcagcaatggccgccagctgagtgaggtcttcatccagctgccg
tcccgcaaggagctgcccgagtactacgagctcatcaggaagcccgtcgacttccggaag
atcaaggagcggatccgcagccacaagtaccgcagtctgaatgacctggagaaggacgtg
atgctgctgtgccagaacgcgcagaccttcaacctggagggctctctgatctacgaggac
tccatcgtgctgcagtcggtcttcaccagcgtgcggcagaagatcgagaaggaggaggac
agtgagggtgacgacagtgaggaagaggaagaggaggcagacgaaggttccgagtccgag
tcccgctcggtgaaggtgaagatcaagctggggcggaaggagaaggggctggagcgggcg
aaggggcgccgcaggatgggccgcggctccagagccaaacccgtggtgagcgacgacgac
agcgaggaggagcaggaggaggagcgttcggccagcggcagcgaagaggactga
DBGET
integrated database retrieval system
