Conger conger (European conger): 133114339
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Entry
133114339 CDS
T10633
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ccog Conger conger (European conger)
Pathway
ccog03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133114339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccog03021
]
133114339
03036 Chromosome and associated proteins [BR:
ccog03036
]
133114339
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133114339
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
133114339
Chromatin remodeling factors
BAF complex
133114339
PBAF complex
133114339
GBAF(ncBAF) complex
133114339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
133114339
NCBI-ProteinID:
XP_061079611
LinkDB
All DBs
Position
16:complement(21602242..21626663)
Genome browser
AA seq
1617 aa
AA seq
DB search
MSTPDPPIGGPPRPGPSPGPGPSPGAMMGPSPGPSPGSTHSMMGPSPGPPSSGHPLPPQG
PSGYPPENMHPMHKPMEGMHEKGMAEDPRYAQMKGVGMRPGGLSGMGPPPSPMDQHSQGY
PSPLGGSDHAPSPVPANGPPSAPMMPSAPGGMPMDGGAGGGGGGGGDPQAMGQQNRGGAP
GGVQGGPGGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQPMTN
MPPAPGPGAGPTPANYSRLHGAVGPNMPPPGPSGVPPGMQGPPPNGPPKTWPEGPMVNAA
APSSAPQKLIPPQPSGRPSPAPPSVPPAASPVMPPQTQSPGQPSQPPPMVLHQKQNRVTP
VQKPRGLDPVEILQEREFRLQARIAHRIQDLENLPGSLAGDLRTKANIELKALRLLNFQR
QLRQEVVVCMRRDTALETALNGKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQE
YLNSILQHAKDFKEFHRSITGKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAED
EEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKKKKKKKPENAEG
MISGLGPDGEPLDETSQMSDLPVKVIHIDSGKILTGMDAPRAGQLEAWLEVNPGYEVAPR
SDSEDSGSEEEEDEEEEPQSSQALVEEKKKIPDPDNEDVSEVDVLHIIEHAKQDVDDEYG
SAAFARGLQSYYAVAHAVTERVDKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMENKRINGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRNGKFNVLLTTYEYIIKDKQILAKIRWKYMIVDEGHRMKNHHCRLTQVLNTH
YLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGIVQGGDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAFRNFKYLRLDGTTKAEDRGMLLK
TFNDPASQYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQTNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEE
DEVPDDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEEDELPTWIMKDDAE
VERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRHKKTTRKR
KRDRDLDLPGPAPASASTPRPREKDEETKKQKKRGRPPAEKLSPNPPALTKKMRKIVDAV
VKYKDGSNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRSLNDLEKDV
MLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEDSEGDDSEEEEEEADEGSESE
SRSVKVKIKLGRKEKGLERAKGRRRMGRGSRAKPVVSDDDSEEEQEEERSASGSEED
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccccggacccccctatcggagggcccccacgccccggcccttccccgggcccc
ggcccctcccccggggccatgatgggcccaagccctggcccctctcctggctccacccac
agcatgatggggcccagcccggggcccccctcctcaggacacccgctccccccacagggc
ccctcagggtaccccccggaaaacatgcaccccatgcacaaacccatggagggtatgcat
gagaagggcatggcggaggacccccgctacgctcagatgaagggggtgggcatgcggcca
ggggggctcagcggcatgggacccccgcccagccccatggaccaacattcccaaggttac
ccctctcctttggggggttcggaccacgctcccagccccgtccccgctaacggccccccc
tctgctcccatgatgccctctgcccctggcgggatgcccatggacgggggcgccggcggc
gggggtggcggcgggggcgacccccaggccatgggccaacagaaccggggcggggccccc
ggcggggtgcaggggggccctggagggcccacgcccttcaaccagaaccagctgcaccag
ctgcgggcccagatcatggcgtataagatgctggcgcgtgggcagccgctcccggaccac
ctgcagatggccgtgcagggcaagcggcccatgccgggcatgcagcagcccatgaccaac
atgccccccgccccggggcctggtgccggccccactcccgccaactacagccgcctgcac
ggagcagtgggccccaacatgcctcccccggggccctctggggtgcctccgggaatgcag
gggccgccccccaacggacctcctaaaacctggccagaagggccgatggtgaatgcagcc
gccccctccagcgcccctcagaagctcatccctccacagccgtcgggccgaccctccccc
gccccgccctccgtacccccggctgcctcccccgtcatgcccccccagacccagtcgccc
gggcaaccctcacagcccccgcccatggtgctgcaccagaagcagaaccgcgtcacgccc
gtgcagaagccccggggcctggaccctgtggagatcctgcaggagcgcgagttcagattg
caggcacgcatcgctcaccgcatacaggacctggagaaccttccgggctccctggctgga
gacctgaggaccaaagccaacattgagctgaaagccctcagactgctcaacttccagaga
cagctgcgtcaggaggtggtggtgtgcatgcgcagagacacggccctggagacggcgctc
aacggcaaggcctacaagcgcagcaagaggcagtctctacgcgaggcgcgcatcaccgag
aagctggagaagcagcagaagatcgagcaggagcgcaaacgccggcagaaacaccaggag
tacctgaacagcatcctacagcatgctaaggactttaaggagttccaccgctccatcacc
gggaagatgcagaagctgaccaaggccgtggccacgtaccacgccaacactgagcgcgag
cagaagaaggagaatgagcgaatcgagaaggagaggatgaggaggctgatggctgaggat
gaggagggctacaggaagctgattgatcagaagaaggacaagcgcctggcctacctgctg
cagcagacagacgagtacgtggccaacctgacggagctggtgcgcgctcacaaggccgtc
caggccctcaaggagaagaagaagaagaagaaaaagaagaagccggaaaatgcagaaggg
atgatctccggcctggggcctgatggagagcccctggacgagaccagccagatgagtgac
ctcccggtgaaggtcatccacatcgacagcggcaagatcctgacgggcatggatgcgccc
agggcggggcagctggaggcctggctggaggtgaacccagggtacgaagtggcccccagg
tccgacagcgaagacagtggatctgaggaggaggaggacgaggaggaggagccccagtct
tcccaggctcttgtggaggagaagaagaagattccagacccggacaacgaggacgtgtcc
gaggtggacgtgcttcacatcatcgaacatgccaagcaggacgtggacgacgagtacggc
agtgcggccttcgcccgggggctgcagtcgtactacgccgtggcccacgctgtcaccgag
agggtggacaagcagtcctctctgctgatcaacgggcagctcaaacagtaccagattaag
ggtttggagtggctggtgtctctgtacaataataacctgaacgggatcctggctgatgag
atgggtttggggaagactatccagaccatcgccctcatcacttacctcatggagaacaag
cgcatcaacgggcccttcctcatcatcgtgcccctctcaacgctctccaattgggtgtac
gagtttgacaagtgggcaccatctgtggtgaaagtgtcttacaagggatctcctgctgct
agacgagcctttgtgcctcagctgcgcaatgggaaattcaacgtgctgctgaccacctac
gagtacatcatcaaggacaagcaaatattggccaagatccgttggaagtacatgattgtg
gacgagggccatcgaatgaagaaccaccactgcaggctgacgcaggtgctgaacacacac
tacctggccccgcggcgtgtgctcctgaccgggacccccctgcagaacaagctgcccgag
ctctgggccctgctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcccccttcgccatgaccggggagaaggtggatctgaatgaagaggag
acaatcctgattatcaggcgtctgcacaaggttctcaggcccttcctcctccgccggcta
aagaaggaggtggaggctcagctgcctgagaaggtggagtacgtcatcaagtgtgacatg
tccgccctgcagagggtcctgtaccggcacatgcaggccaagggggtcctgctcactgac
ggctccgagaaggacaagaagggtaagggaggcaccaagaccctgatgaacacaatcatg
cagctcaggaagatttgcaaccacccctacatgttccagcaaatcgaggaatccttctct
gagcacttgggatttactggcgggatcgttcaagggggtgacctgtatcgtgcttctggg
aagtttgagctgctggaccggatcctgcccaaactgagggccacaaaccacaaggtgctg
ctcttctgccagatgacctcactcatgaccatcatggaggactacttcgccttccgaaac
ttcaagtacctgcgtctggatggtaccacgaaagctgaggaccgaggcatgctgctgaag
accttcaacgaccccgcgtctcagtacttcgtcttcctcctcagcacccgagcagggggg
ctgggcctcaacctgcagtcagccgacaccgtagtcatcttcgacagcgactggaacccc
caccaggacctgcaggcccaagacagggcccaccggatcggacagacgaacgaggtgcgc
gtgctgcgcctctgcaccgtcaacagcgtggaggagaagatcctggcagccgccaagtac
aagctgaacgtggaccagaaggtcatccaggccggcatgttcgaccagaagtcctccagc
cacgagcggagggccttcctgcaggccatcctggagcacgaggagcaggacgaggaggag
gacgaggtgccggatgacgagacggtgaaccagatgatcgccagaagtgaggaggagttt
gaccacttcatgcgcatggacctcgaccggcgcagggaggaggcgcggaaccccaagcgc
cggccgcggctgatggaggaggacgagctgcccacctggatcatgaaggacgacgccgag
gtggagcgcctcacctgcgaggaggaggaggagaaaatgtttggccgcggctcccgccag
cgcaaggaggtggactacagcgactcgctcaccgagaagcagtggctcaaggcgatagag
gagggcacgctggaggagatcgaggaggaagtgcggcacaagaagacgacgcgcaaacgc
aagcgggaccgcgacctggacctgcccggcccagccccggccagcgcctccacgccgcgc
ccgcgcgagaaggacgaggagaccaagaagcagaagaagcgcggccgcccccccgccgag
aagctttcgcccaaccccccggccctcaccaagaagatgaggaagatcgtcgacgccgtc
gtcaagtacaaagacggcagcaatggccgccagctgagtgaggtcttcatccagctgccg
tcccgcaaggagctgcccgagtactacgagctcatcaggaagcccgtcgacttccggaag
atcaaggagcggatccgcagccacaagtaccgcagtctgaatgacctggagaaggacgtg
atgctgctgtgccagaacgcgcagaccttcaacctggagggctctctgatctacgaggac
tccatcgtgctgcagtcggtcttcaccagcgtgcggcagaagatcgagaaggaggaggac
agtgagggtgacgacagtgaggaagaggaagaggaggcagacgaaggttccgagtccgag
tcccgctcggtgaaggtgaagatcaagctggggcggaaggagaaggggctggagcgggcg
aaggggcgccgcaggatgggccgcggctccagagccaaacccgtggtgagcgacgacgac
agcgaggaggagcaggaggaggagcgttcggccagcggcagcgaagaggactga
DBGET
integrated database retrieval system
