Conger conger (European conger): 133115174
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Entry
133115174 CDS
T10633
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccog01001
]
133115174 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccog04054
]
133115174 (ciita)
Enzymes [BR:
ccog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133115174 (ciita)
Protein kinases [BR:
ccog01001
]
Serine/threonine kinases: Other
TAF1 family
133115174 (ciita)
Pattern recognition receptors [BR:
ccog04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133115174 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
AAA_25
Motif
Other DBs
NCBI-GeneID:
133115174
NCBI-ProteinID:
XP_061080927
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All DBs
Position
16:23409049..23439567
Genome browser
AA seq
1218 aa
AA seq
DB search
MASLGTDMVPFQDILCQVRRCVEEASLEEVQSLLEELMEVQVLSRDYYLSLVQESDSEDL
VRRISLPVWQNWDVCRASIQPLLHRPPPCGASQSPSTDGSKMREMAFEYLPEYMDDPLHE
EDLSAIFPQDLECFSPIPCDDSFDIDNIIQSLFEGQEGYSSDAATIPTSPAKSEPVEQET
NSNSSILKRGLPAYLTSGHPKKAKRQRRVPPGPRTSKSRARKHRPQKNCESKSPVSPEEV
VTTASPGMVRLSPCTVPQFLQVPVFMPAPPGGPSFQVTFTTGPPQMVNIPVANTLGPGGP
TYVLVPSPAVAPSPQFMPQSPVAGTVVPPDLAVSTPLSSSSDSANKVLSLASVSAQSPVK
EVPSCKGSKSPTSKVLPDPEIPKCVEQYIKTGKSLMRKMCSSVTTETSVPFESRYVDVSP
AKRQLQVNIRRSAKRCLEKELVVLGDGDRKRATVERGRVFEEGPGQRCGGASIALLGKSG
AGKTAFIRRLCLDWAHGGLPRFDFLFLLEGRALNVLQGGFSLRNLLFNISANPKLSEDSD
VDSNVDAIFRHILGHPQKVLIMLDGFDDFGDCDGLLQSPATSVFRDDYSAKQLFSGLFLK
KILAGCTLLVAARPKEVLNQLLGKVDRIFDLPGFSPAEVELYASRYFEGSPCHDRALKRL
QEGGYALRLCANPFLCESVCFLLDRQDGKKPLPSTLTGLFEAVTYHRLCTIGREQEKEGL
ESWRANVSKLCRVAWGGMKSYTSQLPLQNELSPAEQHALAGAGGILTPYARWHGKEEPIG
RGYGFDHMLSQSFLAALHLALSQDMSSRAMVTQMGGQPRKRKLPADWTDTMHRLTMALLF
QKRALFRGCFLGAEGRAGGRNVAAKRAAVTARLKGLSTSELSPAKLLELCHCVFETGDTK
LTSCLNKSLPCQLSFSGARLDPPDVFILHRLLILSTKRSISLNLQETGINVSGLRELLGL
KCVSSFRASIGDVITLWGDLKKTNAEALLRDTVSKFTINPFKATRLSHIDDLALLIQIHR
EKKLPFCDSSQSEPIPDNDSFSVPAVQNLRRLDFDLGAQNGPMGFLKLVKILPDLQWLQH
LDLEDNKIADSGAEILAAVLPALSSLEMLNLSQNCIGDAGVAKLAPALPSLPALLCLSLY
SNLIGDCGAENLATVLPQMKSLTDLDIKYNKFSNSGAMKLSESMRSCPLMKSIGMWNHFI
PHGVLERLNQQDSRIRML
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctgggcacggacatggtccccttccaggacatcctatgccaggtgaggagg
tgcgtggaggaggcatccctggaggaggtgcagagcctcttggaggagctgatggaagtg
caggtgctttccagggattactatctgtcactagtccaggagagtgactctgaggacctg
gtacgcaggatatctctgcccgtctggcagaactgggacgtgtgccgtgccagcatccag
ccgcttctccatcggcctccgccatgtggagcctcgcaaagtccgagcactgatgggtca
aagatgcgagaaatggcttttgaataccttccggaatatatggatgacccattacatgaa
gaggacctaagtgctatttttcctcaagacctggaatgcttctcccccattccctgtgat
gattcttttgacattgacaacataatacagtctctgtttgaaggtcaagaaggatattcc
agtgatgctgctacgataccaacttctccagccaagtcggagccagttgagcaggaaaca
aacagcaattccagtattctgaagagaggcctacctgcctacttgacatctggacatcca
aagaaagcaaaacgccagaggagagttcctcctggccccaggacatctaagagcagagct
aggaagcacaggccccaaaagaactgtgagagcaaaagtcctgtttcaccagaggaggtt
gtgaccacagcttccccagggatggtgcggttaagcccctgcactgtcccacagttcctg
caggtgccagtcttcatgccagctcctcctggtgggccctctttccaagtgacctttacg
actggccctccgcagatggtcaacatccctgtggccaacaccctgggccctggaggtccc
acctatgttctggtgccatcgcctgcggttgcacccagcccccagttcatgcctcaatct
cccgtggccgggacggtagttccccccgatcttgcagtctccacgccactgagttcctct
tcggacagtgcaaacaaagtattgtctctggcttctgtctccgcccagtctcctgtgaaa
gaggtaccatcatgtaaagggtcaaaatccccaacctcgaaagtgctacccgacccagaa
ataccaaaatgtgttgagcagtacataaaaacgggcaagtcgctcatgaggaagatgtgc
agcagtgtgaccactgagaccagtgtgccttttgagtcccggtatgtggacgtgagccca
gccaagcgacagctgcaggtaaacataaggcggagcgccaaacggtgcctggagaaggag
ctggtagtccttggtgatggcgaccggaagcgggccacggtggagagagggcgggtcttt
gaggaggggccggggcaaaggtgcggcggggcctcgatcgccctgctggggaagagcggg
gcagggaagacagccttcatccgcaggctgtgcctggactgggcccatggcggcctcccg
cggttcgacttcctcttcctattggagggacgggccctgaatgtcctgcagggtgggttc
agcctaaggaacctccttttcaacatttcagccaaccccaagcttagcgaagactctgat
gtggactccaacgtggatgccatcttcaggcacatcctgggccacccccagaaggtcctc
atcatgctcgacggtttcgatgacttcggtgactgcgatggcctcctgcagtccccggcc
accagcgtcttcagggacgactacagcgccaagcaactcttctccggactgttcctgaag
aagatcctggctggatgtacactgctggtggcagctcgacccaaggaggtcctgaaccag
ctccttgggaaggtggaccggatcttcgacctacccggcttctcacccgcagaggtcgaa
ctctatgcatcccgctactttgaggggtccccttgccatgaccgggccctaaaaagactg
caggaaggcggctatgctctcaggctatgtgcaaaccccttcctctgtgagtctgtgtgc
ttcctcctggacaggcaggatgggaagaaaccactgccgtccacactcacaggactgttc
gaggcggtgacttaccaccggttgtgcacgattggccgagagcaagagaaagaggggctg
gagtcatggcgggcgaacgtttcgaagctctgccgcgtggcttgggggggcatgaaatcc
tacacttcccagctgccactgcagaacgagctgagccctgcggagcagcatgcgctggca
ggtgccggcgggattctcactccttacgctcggtggcacggcaaggaggagcccatagga
cgtggctacgggttcgaccacatgctctcccagagctttttggctgccctgcacctggcc
ctgtcccaggacatgagcagcagggccatggtgacacaaatgggggggcagccacggaag
aggaagctgccagctgactggacagacaccatgcaccggctcaccatggccctgctcttc
cagaagagggctctctttcggggttgcttcctgggcgctgagggccgggccggaggcagg
aatgtggcagctaagcgtgccgcggtgacagcccgcctgaagggcctgagtacgtcggag
ctgagtcctgccaagctcctggagctgtgccactgcgtcttcgagacgggcgacaccaaa
ctcaccagctgcctgaacaagagtctgccctgccagctatccttcagtggagcccggctg
gaccctcctgacgtctttatcctgcaccggctcctcatcctcagtaccaagaggagcatc
tccctaaacctgcaggagaccggcatcaacgtctccggcctcagagagctgctgggactt
aagtgcgtctcctccttcagagcttctataggggatgtgattaccctgtggggagatctg
aagaagacaaatgcagaggctctcctgagagacacagtttcaaagtttactatcaacccc
ttcaaagctactcgcctgtctcacattgatgacctcgctctcctcatccagattcacaga
gagaaaaaactgcctttctgtgactccagccaatcagagcccataccagacaatgattcc
ttcagcgtcccagctgtgcagaacctccgaaggctggactttgatctgggtgcacaaaat
ggacccatgggattcttgaaactggtaaagatccttccagacctgcagtggcttcagcac
cttgacctggaggacaataagatcgctgacagcggggcggagattctggctgctgtgctg
cctgcactctcatctctggaaatgctaaatctatcgcagaactgcattggcgatgcgggt
gtggccaagctggctccagctctcccctccctccctgctctcctctgcctcagcttgtac
agcaacctcattggcgattgtggagccgaaaacctggccacagtcctgcctcagatgaag
tcactgacagaccttgatataaagtataacaagttcagcaactcgggagccatgaagctg
agtgagagtatgaggagctgcccattgatgaagagcataggaatgtggaaccattttatt
ccccatggtgttcttgagcgtctgaatcaacaggactcaaggataagaatgctgtag
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