Conger conger (European conger): 133115255
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Entry
133115255 CDS
T10633
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
ccog Conger conger (European conger)
Pathway
ccog03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133115255 (smarce1)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133115255 (smarce1)
PBAF complex
133115255 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Pcf11_helical
Sarcoglycan_2
CENPH
Motif
Other DBs
NCBI-GeneID:
133115255
NCBI-ProteinID:
XP_061081050
LinkDB
All DBs
Position
16:complement(5713324..5725742)
Genome browser
AA seq
431 aa
AA seq
DB search
MSKRPSYAPPPTPAPTTQMPNTPGFVGYNPYSHLAYNNYRLGGNPGSNSRVTNSSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNEYE
AEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAEDPD
DYDDGFSLKHTAAARFQRNHRLISDILSENVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFLEATECFNNELKRLCALKVEVDMEKIAAEIAAAEEAARRRA
EEREREVAEQAERAAAAPEEEPPAPPAADKPPAEDPAADGRPKKKKRKDGEEEDEPPAAM
EMDEPRPESQRANEEGAGTSEDKESVQEGGDSVMEEGTSDSNASSESTGTPADDTLPPEP
APEEGPSNKPE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcttatgcgcctccccccaccccagcccccactacacaaatgccc
aacacgcctgggtttgtgggatacaacccatacagccatctggcctacaacaactacagg
ctcggcggaaacccaggcagcaacagcagggtaacgaattcgtcgggcatcacgattcca
aagccgccgaagcccccggacaagccgttgatgccctacatgcgatacagcaggaaggtt
tgggaccaagtaaaagcctccaatccagatctgaagctatgggaaattgggaagataatc
ggtggcatgtggagagatctcactgatgaggagaaacaggactacttgaatgaatacgaa
gcagagaagatcgagtacaatgagtccatgaaggcctaccacaactccccggcctacctg
gcttacgtcaacgccaagagccgggcggaggccgccctggaggaggagagccgccaacgg
cagtcgcgtctggacaagggcgagccctacatgagcatccagcctgccgaggacccggac
gactacgacgacgggttctccctgaagcacacggccgcggcccgtttccagcgcaaccac
cggctgatcagcgacatcctgagcgagaacgtggtgccggacgtgcgctccgtggtcacc
accgcccgcatgcaggtgctgaagcggcaggtccagtccctcatggtgcaccagagaaag
ctggaggcggagcttctgcagattgaagatcggcaccaggacaagaagaggaagttcctc
gaggccacggaatgcttcaacaacgagctgaaacggctgtgcgcgctgaaggtggaggtg
gacatggagaagatcgcggcggagatcgcggcggccgaggaggcggccaggaggcgcgcg
gaggagcgcgagcgggaggtggccgagcaggcggagcgcgccgccgccgcccccgaggag
gagccgcccgccccccccgccgccgacaagccgcccgccgaggaccccgccgccgacggc
cggcccaagaagaagaagaggaaggacggggaggaagaggacgagccgcccgcagccatg
gagatggacgagccgaggcccgaaagccagcgggccaatgaggagggagcgggcaccagc
gaggacaaggagagcgtgcaggagggcggcgacagcgtgatggaggagggcaccagcgac
agcaacgccagctccgagagcacgggaacgcctgcggatgacaccctccctcccgagcct
gcccccgaggaggggcctagcaacaagcccgaatga
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