Conger conger (European conger): 133115261
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Entry
133115261 CDS
T10633
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ccog Conger conger (European conger)
Pathway
ccog04010
MAPK signaling pathway
ccog04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133115261
04020 Calcium signaling pathway
133115261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccog04040
]
133115261
Ion channels [BR:
ccog04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133115261
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GFIT
Motif
Pfam:
Ion_trans
PKD_channel
CIF2
FmiP_Thoc5
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
133115261
NCBI-ProteinID:
XP_061081056
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All DBs
Position
16:11354223..11416645
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AA seq
1620 aa
AA seq
DB search
MTDDEEVTAPKPVSDHGPGRGETLRDDEDGGRTRIPIPDRTAFRESGGRDPTPDLVSDDE
EQVPYPAVAPVVFFCVKKTTRPRSWCLMVVCNPWFEYMSMLVILLNCVTLGMFQPCEFKW
STILQVFDDFIFAFFAVEMVLKMLALGIFGSKCYLGDPWNWLDFFIVVAGMLEYSLGGHN
ATSAIRTVRVLRPLRAINRVPSMRILVTLLLDSLSMLGNVLLLCFFVFFIFGIVGVQLWA
GLLRNRCFLQDDLKTEYNLSHLSPYYRQEEGEESPFICSTASHNGMLHCHSLPPLKQDKV
ECRLNVSHQNLALYGLDGAGRNSCINWNQYYNQCNPGDHNPDKEAINFDNIGYALIAIFQ
AITLEGWVDIMYYVMNAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENRLM
QQQRARFRSNDSTLASFSEPGSCYEEMLRYIGHLYRKVKRRLLRLYSSCQSKRRKNPELE
LSESDIGVSAADGIYEFTQDRCRGNEGRPGRSCSQRRRAQVRDRNCLAFCWEVFRKKLKR
IAKSEYFNHGIMIAILINALSMGIEYHQQPEELTELLEISNIVFTSMFALEMVLKVLAFG
IFGYIRNPYNIFDGIIVVISVWESTGLSVVRTFRLLRVLTQVHFLPALRRQLEVLMKTMD
NVATFCMLLMFLIFIFSILGMHLFGCKFSLETENGDTLPDRKNFDSLLWAIVTVFQILTQ
EDWNMVLYNGMASTSPWAALYFVALMTFGNYVLVNLLVAILVEGFQAEEDARRSDTDNER
ISANFEEVIMREIQAAELKMCALMMTANAYADPCASVATPMPTPKSSLGTDSAHAFVESR
RGSNTSIDPTFDQKSLSSLWSPPGGPWGAGSNWGSRRSSWNSLSRGPSLKRKDPSGERES
LLSGEGQGSSEEDSSDGGMSSVGDSVVGTPLQRRARSPEPPEPLQVPMPRQDCNGRTQHH
STQPDCWKDERDYEEDQDDSFCLRIRKSLETHKPQFCRQREDWSLYLFSPQNQFRVAFQR
VIAHKMFDHIVLVFIFLNCTTIALERPDILSTERAFLTMSNYIFSVIFVAEMIMKVVAHG
FFSGTDSYLQSGWNILDGVLVFVSLVDILVSVASDGGNRILGILQVLRLLRXARDLRVIS
RAPGLKLVVETLITSLRPISNIVLICCVFFIIFGILGVQLFKGKFYHCEGPDTRNVTNRS
DCELSTNNRWIRRKFNFDNLGQALVTLFVLSTLDAWVDVMYNGLDAVAVDEQPRRNYNPW
MLLYFISFLLIVSFFVLNMFVGLVVENFHKCQQHQEEEEARLREEKRLKRLEKRRRSKGE
PAPEAQQRPYYADYSPVRLYIHTLCTNHYLDLFITFIIAINVVTMSMEHYNQPPYLEEAL
KYCNYGFTITFILEALLKLVAFGFTRFLKDRWNQLDLAIVGLSIMGITLEEIKNSAALPI
KPPIIRIMRVLRIARVLKLLKKATGMQSLLDTVMQALPQMWNLGLLFMLLFSLYAALGVE
LFGKLATMKCNEEFESLGSDATFENFGMALLTLFRVFTGDNWSAIMKDMLGDCGLPYLRF
ISPVYFITFVLIAQFLLFNMVVAMVEENYKKTISYYKGDQPNPQETHQSGLSENLTGVVG
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgacgaggaggtgacggcacctaaaccggtatcggatcatggcccgggtcgg
ggcgaaaccctgagggatgacgaagacgggggaagaactagaattcctattcccgaccgg
actgcatttcgggaatccggcggacgcgatccaaccccggatctggtctcggatgacgag
gagcaggttccctatcctgccgtcgctcccgtggtcttcttctgcgttaaaaagaccacg
cgtcctcgcagctggtgtctgatggtggtttgtaacccgtggttcgagtacatgagcatg
ctggtcatcctcctgaactgtgtgaccctgggaatgttccagccctgtgagttcaaatgg
tccaccatcctgcaggtttttgatgacttcatttttgctttctttgctgtggagatggtc
ctcaaaatgttggcgctagggattttcgggtctaaatgttacctgggcgacccatggaac
tggctggacttcttcatcgtcgtggccgggatgttggagtactcgctgggaggccacaac
gccacatcagccatccgcaccgttcgtgtgctccgccccctccgcgccatcaacagagtc
cccagtatgagaatcctggtgacactgctcttggactcgctgtcgatgctggggaacgtc
ctgctcctctgcttcttcgtcttcttcatcttcggcattgtgggggtgcagctctgggcc
gggcttctgaggaaccgctgcttcttacaggacgatctgaagacggagtacaacctgtcg
cacctgagcccatactacaggcaggaggagggcgaggagagccccttcatctgctccacc
gccagccacaacggcatgctgcactgccatagcctcccccccctcaagcaggacaaggtg
gagtgccgactcaacgtctcccaccaaaacctggccctgtacgggctggacggggccggc
cggaacagctgcatcaactggaaccagtattacaaccagtgcaacccgggggaccacaac
cccgacaaggaggccatcaacttcgacaacatcggatacgcgttgattgccattttccag
gccataaccttggaaggatgggtggacatcatgtattatgtaatgaatgcgcattccttt
tacaactttatatattttatattgctcatcatagtgggctccttcttcatgatcaacctg
tgcctggtcgtgatcgccacccagttctcggagaccaagcagcgggagaaccggctgatg
cagcagcagcgggcgcgcttccgctccaacgacagcacgctggccagcttctcagagccg
ggcagctgctacgaggagatgctgcgctacatcggccacctgtaccgcaaggtgaagcgg
cgtctgctgcgcctctacagcagctgccagagcaagcggaggaagaaccccgaactggag
ctcagcgaatcggacattggcgtctccgcagccgacgggatatacgagttcacccaggac
cgctgccgtggcaacgagggtcgcccagggcgctcctgtagccagcggcgacgagcacag
gtccgggacaggaactgcctggccttctgctgggaggttttccgcaagaagctgaaacgc
attgcgaagagcgagtacttcaaccacgggattatgatcgccatcctcatcaacgcactc
agcatgggcattgagtaccaccagcagcctgaggagctgacagaactcctggagattagc
aacatcgtcttcaccagcatgttcgccctggagatggtgctcaaggtgctggccttcggg
atcttcggctacatcagaaacccctacaacatcttcgacgggatcatcgtggtcatcagt
gtgtgggagagcacgggcctgtcggtggtcagaaccttccggctccttcgcgtactgaca
caggtacacttcctccccgcccttcggcggcagttggaggtgctgatgaagaccatggat
aacgtggccaccttctgcatgctgctaatgttcttgatcttcatcttcagcatacttgga
atgcatttgtttgggtgcaagtttagcctggagacagagaacggagacacactcccagac
aggaagaattttgactcgttgctgtgggcgattgtcactgtgttccagatcctaactcag
gaggactggaacatggttctgtataacgggatggcctccacctccccctgggctgctctg
tacttcgtggccttgatgacctttgggaactacgtcctggtaaacctgctggtggccatt
ttggtggaaggttttcaagcagaggaagatgcaagaaggtcagacacggacaacgagaga
atttcagcaaattttgaggaggtgataatgagggagattcaagctgcagagctgaagatg
tgtgcactgatgatgacagccaatgcgtatgcagatccatgtgccagcgtggccacaccc
atgcccacgcccaagagctccctgggaacagactcagcccacgcctttgtcgagtcacgg
cgaggcagcaacacgtctatcgaccccacctttgaccagaagtccctgtccagcctgtgg
agcccccccggggggccctggggagcgggcagtaactggggcagccggcggtccagctgg
aacagcctgagccgtgggccgagcctgaagcggaaggacccgtcgggggagcgtgagtcc
ctgctgtcgggcgagggccagggcagctcggaggaggacagctcagacggtgggatgtcc
agtgtgggggacagcgtggtgggaacccccctgcagcgccgggcccgatcccctgaaccc
cccgagcccctgcaggtccccatgccgcgccaagactgcaacggccgcacccagcaccac
tccactcagcctgactgctggaaggatgagcgggactatgaggaggaccaggacgacagc
ttctgcttgcgtatccggaagtcgttggagacccataagccccagttctgccgtcagcgt
gaagactggtccctgtacctgttctccccacagaaccagtttcgtgtcgccttccagagg
gtcatcgcacacaagatgtttgatcacatcgtgctggtgtttatcttcctgaactgcacc
accatcgcactggagaggcccgacatcctcagcacggagcgtgcatttctcaccatgtca
aactatatcttctctgtgatctttgtagcagagatgattatgaaggtggtggcgcacgga
ttcttttcagggacggacagctacctgcagagtggctggaacatcctggatggtgtgctg
gtcttcgtctccctggtggacatcctggtgtccgtggcatcagatggcgggaaccggatt
ctgggaattttgcaggttctgcgcttgctcaggtgagcacgtgacctcagggtgatcagt
cgagctcctggcctgaagcttgtggtggagacactgatcacatcgctgcgaccgatcagc
aacattgtgctcatctgctgtgtgttcttcatcatcttcggcatcctgggggtgcagctg
ttcaaggggaagttttatcactgtgagggaccagacacgaggaacgtcaccaacaggtcc
gactgcgagctatcaactaacaatcgctggatcagacggaagttcaactttgacaacctt
ggacaggccctcgtgacactgttcgtgctctcaacgttggatgcatgggtggacgtcatg
tacaacgggctggacgctgtagcagtggacgagcagccaaggcggaactataacccctgg
atgctactctacttcatctccttcctgctcatcgtcagcttctttgtgctcaacatgttt
gtgggcttggtggtggagaacttccacaagtgccagcagcaccaggaggaggaggaggcg
cggctgcgggaggagaagaggctgaaaaggctggagaaaaggcgcaggagtaagggagag
cccgcgcccgaagcccagcagcggccgtactatgccgactactcccccgtccgtctctat
atccacacactgtgcaccaaccactacctggacctcttcatcaccttcatcatcgccatc
aatgtggtcaccatgtccatggagcactacaaccagcccccgtaccttgaagaggctctg
aaatactgcaactatggcttcaccatcaccttcatccttgaagctctgctcaagctggtt
gcttttggcttcaccagattcttgaaagacaggtggaaccagctggatctggccattgtg
gggctttccatcatggggatcactctggaggagatcaaaaacagtgcggccttacccatt
aaaccccccatcatccgcatcatgagggtcctgcgcatcgctagagtgctgaagcttttg
aaaaaagctacagggatgcagtctctgctggacacagtgatgcaagccttgccacagatg
tggaatttgggtctgctcttcatgttgctgttctctctatatgctgcactgggtgtggag
ctctttgggaaactggctacaatgaagtgcaatgaagaatttgagagtctgggcagtgac
gccacatttgagaactttgggatggccttgctcacccttttcagggtatttacaggggac
aactggagcgccatcatgaaggacatgctgggggactgcggcctgccctacctacgcttc
atctccccggtctacttcatcaccttcgtgctgatcgcccagttcctgctgttcaacatg
gtggtggccatggtggaggagaattacaagaagactatatcctattacaaaggagaccag
cccaatccccaagaaactcaccagtctggcctgtcagaaaacctgacgggagttgtgggt
tga
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