Conger conger (European conger): 133116796
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Entry
133116796 CDS
T10633
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ccog Conger conger (European conger)
Pathway
ccog04140
Autophagy - animal
ccog04148
Efferocytosis
ccog05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133116796 (vps16)
04148 Efferocytosis
133116796 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133116796 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133116796 (vps16)
Membrane trafficking [BR:
ccog04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
133116796 (vps16)
Hops complex
133116796 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF740
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
133116796
NCBI-ProteinID:
XP_061082730
LinkDB
All DBs
Position
17:15039069..15050924
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AA seq
835 aa
AA seq
DB search
MAFVTANWNPLGEAFYRKIELYEMGWNLRDGLRDCLVAAAPYGGPIALLREPQRRSPSAR
PQLEIYSASGISMASFPWKSGPVKHLGWTVCDDLLCVQDDGTVLIYDLFGDFKRHFSMGN
EVLQNHVVEAKVFHSPYGTGVAIVTGAFRFTLATNIDDLKLRRLPEVPGLQGAPSCWAVL
TQDRQSKVLLANGADLFILDNTSCTPVTPPGLSPLASSIVQMAVSFSYKYLALFTDSGHV
WMGPANLKDKLSEVETKVRTPPKQMVWCRRPKSQQPSVVIMWDRHLLVAGECKDTIQYHL
DDESVLVPELDGVRIICGTHHELLHEVPAACEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQSLLGEAVRQCVEAAGYEHEPDTQKTLLKAASFGKCFLSNFPPEQFVSMCR
DLRVLNAVRDYTVGIPLTHPQYKQMTIQVLIDRLVYRKLYPLAIEICRYLKTPEYQGVSR
VLKHWACCKVQQKEEGDDVIARTISVKLGEAGGISYSEIAARAYECGRTELAIKLLEFEP
RSGEQVPLLLKMKRSQLALSKAIESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKYQEQDTLKDLFNQDDDHQELGNFYVRASYQEGKLEARLSLLQSAVDEYNKAKNE
FAAKATEEEMKLLRFQRRVEEEKGERVLGSSLQDTMHCLLTAGLHKQAEQLYKEFRVPDK
RYWWLKLTALAEKEDWDELEKFAKSKKSPIGYLPFVEVCVKLHNKYEAKKYVSKVTPEQK
VKAHLAVGELDGAAEAAIERRSEAEISLVLSRCSPTTDRALLDRLNRARSTAAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgttaccgcaaactggaacccgctgggggaggctttctacagaaagattgag
ctgtatgagatgggatggaacctaagggacggactccgagattgtctggtggcggcagct
ccgtacggtgggcctatcgctttgttgagagaaccacagcgtcgctcccccagtgccagg
ccccagcttgagatctactccgcctctggcatctccatggccagcttcccttggaagagt
ggtccagtgaagcatctgggctggaccgtgtgtgacgacctgctgtgcgtgcaggacgat
ggcaccgtgctcatctacgacctgttcggagacttcaagaggcatttcagcatgggaaac
gaagtgcttcagaaccacgtggtggaggccaaggttttccactcgccttacggcacgggg
gtcgccatagtaaccggagcgttccgattcaccctggcaacaaacatcgatgacctgaag
cttcggcgcctccctgaggttccagggctgcagggggcgccatcatgctgggcagtgctg
acacaggacaggcagagcaaagtcttgctggccaatggcgcagacctcttcatcctggac
aacacgtcctgcactccagtgacgccaccaggtctctcccccctagccagcagcattgtg
cagatggcggtgtccttcagctacaagtacctggccctgttcactgactcgggccacgtg
tggatgggccccgccaacttaaaggacaaactcagcgaagtggaaaccaaggttaggact
ccaccaaaacagatggtctggtgccggagaccaaagagccagcagccctcggtggtgatc
atgtgggaccgccacctcctggtggccggagagtgtaaagacaccattcagtatcacctg
gacgacgagtctgtcctggtcccggagttggatggtgtgcggatcatctgtgggactcac
cacgagcttttacacgaggtcccagctgcctgtgaggagatcttcaagatcgcctcaatg
gcacctggagctctgcttctggaggctcataaggagtatgagaaggagagtcagaaggca
gatgagtacctgcgggagattaaagagcagagtctgctcggcgaggccgtcaggcagtgt
gtggaggcagccgggtacgagcatgagcccgacacacagaaaacactgctcaaggcggcg
tccttcggaaagtgtttcctgagtaacttccctccagagcagtttgtcagcatgtgccga
gacctgcgcgtcctcaacgctgtgagggactacactgtgggcatcccgctcacacaccct
caatacaagcaaatgaccatacaagtgttgattgacaggctggtctatcggaagctgtat
cctctggccatagagatctgccgctacctgaagaccccagaataccagggagtgagcagg
gtgctgaagcactgggcctgctgcaaggtccagcagaaggaggagggcgatgatgtcatc
gcacggaccatcagcgtgaagctgggcgaggctggggggatctcgtactctgagatagct
gcccgcgcgtacgagtgtggcaggacggagctggccatcaagctcctggagtttgagcct
cgctctggggaacaggtacctctgctgttgaaaatgaagaggagccagctggccctcagc
aaagccattgagagcggagacactgacctggtgtacacggtggtgacctacctgaagaat
gagatgaaccgaggggacttcttcatgaccctgaggaaccagccagtggctctcagtcta
taccgacagttctgtaaataccaagagcaggacactctaaaggacctcttcaatcaggat
gatgatcaccaggagctgggaaacttctatgtcagagccagttaccaagaggggaagctt
gaggcccggttgtctcttctccaaagtgcagtggatgagtacaacaaggccaagaacgag
tttgctgccaaggccacggaggaggagatgaagctcctgcgcttccagaggcgggtggag
gaggagaagggtgagcgcgtcctggggtcctccctgcaggacactatgcactgcctgctc
accgccggcctgcacaagcaggccgaacagctctacaaggagttccgtgttcctgacaag
aggtactggtggctgaagctgaccgctctggcagagaaagaggactgggatgaactcgag
aagtttgccaagagcaagaagtctcccatcggatacctgcccttcgtcgaggtctgcgtg
aagctgcacaataaatatgaagccaagaagtatgtttccaaggtgacccctgaacagaaa
gtcaaagcacacctggcagtgggggagctggatggtgcggcagaggcggccatcgagagg
cgcagcgaggcagagatcagcctggtcctctcccgctgctcccccaccaccgaccgcgcc
ctcctggaccgcctgaaccgcgcccgctccaccgccgccaagaagtga
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