Conger conger (European conger): 133116906
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Entry
133116906 CDS
T10633
Symbol
col6a3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04518
Integrin signaling
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133116906 (col6a3)
04518 Integrin signaling
133116906 (col6a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133116906 (col6a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133116906 (col6a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133116906 (col6a3)
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133116906 (col6a3)
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133116906 (col6a3)
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133116906 (col6a3)
Hyaluronan
Extracellular matrix or blood plasma proteins
133116906 (col6a3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
vWA_SIBA-E
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
133116906
NCBI-ProteinID:
XP_061082902
LinkDB
All DBs
Position
17
Genome browser
AA seq
3000 aa
AA seq
DB search
MRKRWCLSFCALLCMVLSGLVPNTHAQDDGRPALAADIYFLVDSSWSIGQENFQYVRQFL
LSTVKTLSEWSDGFRFALVQYSGFPKTEFRLNTYQAPQDVLAHIRSLAYRGGGTRTGLGL
DFLIKNHLTAAAGSRAAEGVPQAVVVLTDGLSQDDVAPPSSVLKMAGVDVFAVGVKDAAV
WELREMASEPTDTHVYNVVGFTALSNIVQDLVVNLGMAAGYPAAAEAAGIIQDVTAQESA
DLVFLIDGSENVGEANFPQVRDLALSVVERLDVRTDGVRVAVILYSADPEIQFYLNSYDS
KAAVMDAIKELSFTGGTEVNLGAALQEVADTLLAPEAGGRAEEGVPQAVVVISAGTSSDD
FSSGDRALKQASVFVFGVAAGGASTTELETIATDKTFVLSAPSVHAVATQGEQLVKYLSG
VAQRAITLHTEVTEALAVGRRDIIFLIDGSQNMGNTLFNAVREFIRKFVETLPIGPDQVQ
VGVAQFTDSPKLEMDLNTHSTKESLVTAVGRMRVKGGTQVVNIGAALEFVRTEMLRADKG
SRISEGVPQLVLLLSAKQSSDSVAQQASELHRMGVLTMAAGAKNANQQELKQIAFDESLV
FILKDFRQLLRNPSQVISPLITLSGVIVTEQPTEPIIEITTVQTQRIIRDIVFLVDGSAY
VGEAGFAHVLAFISRIVDQLDVRPDRVRIALMQFARDQRTEFYLNTYNNKQDVLNAVARI
SPMGGDAVFTGAALEFALANHFTRSAGSRKRQGVPQAVVLITGGPSQDEVKRVADKVALE
GVLTYTVGAEQADESLLKTVAFVPTLAYHVNRFDGLQSVVERIMTPLISVVGATNISDVD
KQRDVAFLIDGSDAVGRDFRYIQDFILNVIEPLDVGIEKVRIAVVQHSENPSPNFYLDTY
KTKEDVVSAVSTMTLAGGRSLNTGVALQFMKDTIFSAERGSRAAQHVPQFLIVLTAGSSR
DSVRGPAGVLKTGGVLPFGVGVRDADVRQIEAISHNPSFSFTVREFNQLNTVQQRLGSFV
TLSDEDIQRVIEQAETQGPKKDVVFLVDGSDATRQQFTVIQEFIRRVVENLNVGENKIRI
GVVQYSDSPSGDMFLNSHTTKQGVLNAIKGLQHRGGRQRNLGRAVEFVSQEALHPRQGGR
RLEGVPQFVIVVSGGKSSDNVIGPATTLKQSGVVPFSIGTRDVGSQELEIVSYVPNFAFT
IDDFPGLYTIQHGLITTLTELSDEEIRNLKPQYPAVTPSGGDKRDVVFLIDGSTAVRGEF
SNIRDMIGRVVDRLDVGLDRVRISVVQYSEEPKVEFLLNEHSTPEEVRGAVRKIRNRGGN
QLNTGRALDWVSKNIYQRSAGSRVEEGIPQFLVLVTGGKSSDNVYGPANQLKSSRVVAPF
AIGGRNADQNELRAISLKPEYAYTVTDFQELPSVERQMLASVKTLTTKDITDTVLDVANV
FLGKKDIVFLIDGSDTVGSSGIAHIRDFILKVLQQLDIRPDQVRIGIVQYSDRQKTEFSL
NSLDNKAAVLSAVKRLRLLGGRSADLAEGIDYVLQNELKPSAGVRPYEASQHLVVLTGGR
SPSDVSGYGEKLKNQRIGCIGVGAGAADSRQLTQIATTSADVLQVANFPGLPNVQDRFIA
RLSGTLPEVLPDPNPDIEIDPGLSPKVADIVFLVDGSINLGKENFKEVMEFIMNLVDLFF
TERDNLQIGLAHYAADVTDVFYLNTYKNKDDILEAVTGTEYKGGRRLNTGAAIKYVQDNY
FVKSRGSRKDEGVPQILMLINGGRSHDDGKTAALGLKNAGVRIYAVGVGDIEDELTGLGS
EATTVHRARTFLELSELNEQILQTLDDDVKGQKHCTGEVEPTRVCKVEVLVGFDVSAQNI
FAAQRSLESKMGAILQRIMQMQAISCTAGQAPSVQVGMLAMDSASEPVLLDFTGDYTQLF
DSFRALHNRGPYVLNAKTIKAYTDQFRNRASDVVKVVIHLTDGLDGQYAQMKEGVEALRV
SGVNSFILVGLERVQRFEDAVLLEFGRGFRYTKPLRVNLLDLDYELMEELDNIAERECCS
VPCKCTGQRGDRGSVGAPGIKGGPGGPGYSGHPGDEGGPGERGPPGVNGTQGFQGCPGQR
GVKGSRGYSGEKGEFGEIGLDGINGEEGTRGVAGPPGDRGNPGGRGPKGAKGQAGDQGEL
GLRGDPGVTGKDNKKKGPKGDPGDVGPLGEAGTDGVQGGPGEPGRRGGDGRRGPPGPNGP
AGKPGADGVGGEPGIGGSRGPPGPNGTPGTRGEDGNPGPRGAGGTQGTPGEKGRRGSLGR
KGEPGDSGTKGGVGPPGPRGEPGDDGRDGFGIPGPKGRRGDEGFPGFPGPKGAAGSPGTE
GGPGPRGNRGQRGVAGDPGTPGQKGDVGYPGPYGLKGPRGPGVVQCDLVKKIRDNCPCCY
VLSPSSLDLVNNTILGQVITLPAPTHTQYNTTIDKIMSCHVCLDFCAPNQVCDYIPPQST
RDRRSFTTDVDIDVAFVMDSSQSTWPMVFMEMKRYIAHVIDQLVIASDPKNSVHHARVAV
IQHAPYEFATNGSGAPVRVDIDLTDHSSKEDIRSFLQDKVTQLEGSLSLAXAIEYTIEHV
FEKAPHPRNLKLIVLMVTGPVWEQDEEQLVRLATEAKCKGYFLVILGVGERLSVTDARIL
VRMASEPASVFFKKIDGAGQFYDPHIQRFGLLLPKYISMEHAFYMSPEVSKNCQWYQSDQ
PWQFPFKHSQKLEKHEKHHVNQVAHPAKSKEVVTEEELHVANVTSSSMRLHWATSDSKGT
GHHQVTVTRLSDHALALQKNVTGTELLLEGLESAQKYHVVVATHAHGKPVRTHKGIVSTK
AAEKKTETPAQVTAALPTAPLDNPELVNENADPCALDFDFGMPCKDYKAKWFFDKNNGIC
SQFWYGGCGGNANRFETEAQCMRRCLKTSPEASVQQEQTSDIPAPAALVGTNICELPKVE
GSCAKFVLKWHYESSTKACTRFWYGGCGGNQNRFDTQEECQKACGKAAPGKPGIMAAMRT
NT seq
9003 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcggtggtgcttgtcgttttgcgcccttctttgcatggtgctctcaggcctg
gtccccaacacccatgctcaggatgatggcagaccagcgctggctgcagatatatacttt
ctagtggactcatcctggagcattggacaagagaattttcagtacgtcagacagtttctg
ttgagtacggtaaagacactgagcgagtggagcgatgggttccgcttcgccctggtgcag
tacagcggcttccccaaaacggagttccggttaaacacataccaggccccgcaggacgtc
ctggcccacattaggagcctggcgtaccgggggggaggcactcgcactgggctgggcctg
gatttcctgataaagaaccacctgacggcggcggccggcagccgggccgcagaaggggtc
ccgcaggcggtggtggtcctgacggacgggctctcccaggacgacgtggccccgccgtct
tccgtgctcaaaatggccggcgtggacgtgttcgcggtcggggtgaaggacgcggcagtg
tgggagctcagggagatggctagcgagcccacggacacgcacgtgtacaacgtagtcggt
tttaccgccttgtcgaacatagtccaggacttagtggtcaatttgggcatggccgccggt
tatccagcggcagccgaggctgctgggataatacaagatgtgacagcacaagagtccgct
gaccttgtattcttaattgacggatcagagaacgttggggaagccaacttcccccaagtc
cgggatttggcgctcagcgtcgttgagaggcttgacgtgagaacggacggcgtccgtgtg
gccgtcattctttatagcgcagaccctgagattcagttctatcttaatagttatgacagc
aaagcagctgtcatggacgccatcaaggagcttagcttcacgggcggaacagaggtcaac
ttgggtgcggctctccaggaggtcgccgataccctcctggcgcccgaagcggggggcagg
gcagaagaaggggttccgcaagccgtcgtggtaatcagcgctgggacgtccagcgacgat
ttcagttccggtgacagggccctaaagcaagcgagtgtttttgttttcggcgtggcggct
ggtggtgccagcaccacggagctggagactattgccacggacaagacctttgtgttgtca
gcacccagtgtccacgctgtggccactcagggggaacaactggtgaagtacctttctggg
gtggcgcagcgtgccattaccttacacaccgaagtgacagaagccttggccgttgggagg
agggacatcattttccttatagatgggagccagaatatgggtaacaccctcttcaacgcc
gtccgtgaatttatcagaaagtttgtcgaaaccttgcccattggacccgatcaggtccag
gtgggtgtggcccagttcaccgattcccccaagctggagatggacctgaatacacacagt
accaaggagtcccttgtcacggcagtggggaggatgcgtgtgaaggggggcactcaggtg
gtcaacattggggctgccctggagttcgtcaggaccgagatgctgagggctgataaaggg
agccgcattagcgagggggtgccccagctggtgctgctcctctcggccaagcagtccagc
gacagtgtggcccagcaggcctcggaactccaccgcatgggtgtcctgaccatggctgcc
ggcgccaagaatgcaaaccagcaggagctgaagcagatcgctttcgacgagagcctggtc
tttatattgaaggacttccgccaactgctccgcaacccaagccaagtcatctctcccctc
atcacgctctctggagttattgtgactgagcaaccgacagagccaatcattgaaataaca
acagtgcagacccagcgcatcatccgagacatcgtcttcttagtggatgggtcagcctac
gttggagaggccggtttcgctcatgtgctcgccttcatctcccgcattgtggaccagctg
gatgtgcgcccagacagggtgcgcattgccctgatgcagtttgcgagggaccagcgcaca
gagttttacctgaacacttacaacaacaagcaggacgttcttaatgccgtggctcggatc
agtccaatgggaggagatgctgtcttcacaggtgcagcgctagagtttgcgttggccaac
cacttcacccgttcagctgggtccaggaaaaggcagggggtcccacaggcagtcgttctc
atcactggaggtccatctcaagatgaggtcaagcgggtcgctgataaggttgccctggaa
ggagttctgacctacacagttggtgctgagcaggcggacgaatcactcttgaagaccgtc
gcctttgtgcccaccttggcctatcacgtgaacagatttgacggcctgcagagtgttgtt
gaacgaataatgacacccttaatctcagtggtcggggcaacaaacatttctgacgtggac
aagcagagggatgtggcttttcttattgatggctctgatgctgttggaagggatttccgt
tacatccaggatttcattctgaacgttatcgaacctctcgatgttggaattgaaaaagtg
cggatagctgtggtccagcacagtgagaacccgtcacccaacttttacctggacacttac
aaaaccaaagaggacgtggtctcggctgtcagcaccatgacacttgccggcggtcgatct
ctgaacacaggggttgccctgcaattcatgaaggacacgatcttctccgcggaacggggc
agcagagcggctcagcatgtcccgcagttcctgatcgttctgactgcagggagttccagg
gacagtgtgagagggcccgctggagtcctgaagacgggaggagtcttacccttcggcgtg
ggagttcgggatgcagatgtgaggcagattgaggccatctcccacaacccttccttctca
ttcacggtgagggaattcaaccagctgaacacggttcaacagcgactggggagcttcgtc
accctttccgacgaggacatacaaagggtgatagaacaagcagagacccagggtccgaag
aaggatgttgtctttctggttgatggatccgatgccacaagacaacaattcacagtcatc
caggaattcatccgcagagttgtggaaaatctcaacgttggagagaacaaaatccggatt
ggagtggtgcagtacagtgatagtccaagtggggatatgttcctgaactctcatacgacc
aagcaaggtgttttaaatgccataaagggtctgcagcacagagggggtaggcagcgtaat
ttggggagggctgtagagtttgtcagccaggaggccttacaccccagacaaggaggcaga
agactggaaggcgtcccacagtttgtgattgtggtctcagggggcaaatcttcagataat
gttataggtcctgccacaactttaaagcagtctggtgtggtgcctttcagtattggaacc
agagatgtagggtcccaagagcttgaaatagtttcctatgttccaaactttgctttcact
attgatgatttccccggcctatataccattcagcatggactcatcaccactctgacggag
ctgtcagatgaagaaattaggaatttaaaaccccagtacccagcagttactccgtctggt
ggagacaagagggacgtggtcttccttattgacggatccactgctgtgcgtggtgaattc
agcaacatccgggatatgatcgggagagttgtggaccggctagatgtaggcctggacagg
gtgaggatctctgtagtccaatacagtgaagagcccaaggtggagtttctccttaatgag
cattccactccggaggaagtgcgtggtgcagtgcggaagataaggaacaggggaggaaac
caattgaacacaggccgagctttggactgggtgtccaaaaacatctaccagaggtcagct
ggcagcagggttgaagaggggatcccgcagttccttgtactggtcaccgggggcaagtcc
tcagacaacgtctacgggccagccaatcagttgaagtcaagccgggttgttgctcctttt
gccattggagggaggaacgccgaccaaaatgagctgcgggctatatctctgaaacctgaa
tatgcctacacagttaccgattttcaagaactccccagtgttgagcggcaaatgttagca
tcagtgaaaaccttgacaacaaaagatataactgatactgtactggacgtagctaatgtc
ttccttggaaaaaaggacattgtattcctgattgacgggtcagacactgtgggctccagt
ggtatcgcccacatccgggacttcatcctgaaagtgctccagcaactggacattcgtcct
gaccaggtccgtattggcatcgttcagtacagtgacaggcagaagacggagttctctctc
aactcccttgacaacaaggctgctgttctgtcggcagtgaagaggctccgccttttgggt
gggcggtccgctgatctggccgaaggcatcgattatgtgctacaaaacgagctcaagcct
tcagccggtgttcggccgtacgaggcctcccagcacttggtggtgcttaccggggggagg
tccccatcggatgtctctggctatggcgaaaagctcaagaatcagcggatcggttgcata
ggggtcggtgctggtgcggctgactccaggcagctcactcagatcgccaccacctcggcg
gacgtcctccaggttgccaacttccccgggctgcccaacgtccaggacaggttcattgcc
agactcagtggcactttaccggaagtgctacccgatcccaatcccgatatcgaaatcgac
ccaggtttaagtcctaaagtagccgacattgtatttttggtggatggttcaataaacctt
ggcaaggagaatttcaaagaagtcatggagttcattatgaaccttgtcgacctctttttc
acggagagggacaacctgcagattggtctggctcattacgctgcagatgtgactgacgtg
ttctaccttaacacgtacaagaacaaggatgacatcctggaagccgtcaccgggacagag
tacaaaggaggccgtaggctcaacaccggcgctgccataaaatacgttcaggacaattat
tttgtcaaatcaagggggagcaggaaagatgagggcgtcccccagatcctgatgctcatt
aatggcgggaggtctcatgacgatgggaagactgccgcacttggtctcaaaaatgctggt
gttcggatctatgccgtcggggtgggcgacattgaggatgagctcaccggcctggggagt
gaggcaaccactgtgcacagagctagaactttcctggagctctccgaactgaacgagcag
atcttgcagactctggacgatgatgtgaagggccagaaacactgcacaggggaggtggaa
cccacaagggtctgtaaggtggaggtactggtgggctttgacgtgtccgcacagaatatc
tttgctgcccaaaggtctctggaatccaaaatgggggccatcctccagaggattatgcag
atgcaggccatcagctgcactgctggccaggctccctctgtacaggtcggcatgctggcc
atggactccgcatccgaaccggtcctgttggacttcacaggagactacacccagcttttt
gattccttcagggccctccacaaccgtggcccttacgtcctcaacgccaagaccattaaa
gcctacaccgaccagttccgcaaccgagcctcggacgttgttaaagttgtgatacacctg
accgatgggctggatggacagtatgcacagatgaaggagggtgttgaggctctccgtgtg
tcaggtgtgaacagttttatcttggttggcctggagagagttcagcggtttgaagatgcc
gtgctgctggagttcgggcgtggctttagatataccaagcctctacgtgtcaacctgctg
gacctggactacgagctgatggaggagctggacaacattgcagaaagagaatgctgctcg
gtgccgtgcaagtgtactggacagaggggggatcgaggatctgtaggagctcccggaatc
aagggtggaccaggagggccgggctacagcggacatcccggagatgaaggcggccctggt
gagagaggtcccccaggtgtgaacggaactcagggcttccagggctgtccagggcagagg
ggcgtgaagggctctcgaggatactccggagaaaagggagaatttggggaaatcggtctg
gatggaatcaatggagaggagggaacacgtggagtggcaggacctccaggagacagagga
aacccaggagggaggggtcctaaaggggctaaaggccaggctggagatcaaggcgagctg
ggcctgaggggagacccgggtgtgactggaaaagacaacaagaagaaaggaccaaagggt
gacccaggcgatgtcggaccactgggcgaagcaggcacagatggagtgcaagggggccct
ggtgagccaggcaggaggggtggtgatgggaggagaggtccccctggaccaaacggacct
gctgggaaaccaggagctgatggtgttgggggagagccaggcattggagggtctcggggc
cctcctggaccaaatggaactccaggaaccagaggggaggatgggaaccctggacccagg
ggtgctggaggaactcaaggaactcccggagaaaagggcagaagaggatctcttggccgc
aagggtgaaccaggagattcaggaacaaagggtggggtcggacccccgggaccccgtgga
gagcctggcgatgacggcagagatggctttggaatccctggacccaaaggaagaaggggt
gacgaaggattcccaggcttccctggacctaagggcgcggcgggtagcccaggcactgag
ggaggcccagggccaagaggaaaccgaggacagcggggtgttgctggtgatcctggtact
cctggtcagaaaggggatgttggataccctggaccttatggcctgaaaggaccgagagga
cctggtgtggtgcaatgtgatttggtgaagaagatcagagataattgcccttgctgctat
gttctctctccctcctctctcgatctcgtcaacaacacaatcctgggtcaggtcattact
ctccccgcacctacccacacccagtataacacaaccatcgacaagatcatgagttgccat
gtctgcctggacttctgcgcgcccaaccaggtctgcgactacatcccccctcaatcgacg
agagacaggcggtccttcaccaccgacgtggacatcgacgtggccttcgtgatggacagc
tctcaaagcacctggcccatggtcttcatggagatgaagcgctacatcgcccacgtcatc
gaccagcttgtgatcgcatccgaccccaagaactcggtccaccacgctcgcgtggcagtc
atccagcacgccccctatgagtttgcgaccaacggcagtggggcccctgtgcgggtggac
attgacctgaccgaccacagctccaaggaggacatcaggagcttcctgcaggacaaggtg
acccagctggagggctctctgtcgctggcanacgccatagagtacaccatcgagcacgtg
ttcgagaaggccccgcacccacgcaacctgaagctcatcgtgctgatggtgacgggtccc
gtctgggagcaggacgaggagcaactggtgcgcctggccactgaagccaagtgcaagggc
tacttcctggtgatcctgggcgtgggagagcgcctgagcgtgaccgacgcccgcatcctt
gtgcgcatggccagcgagcccgccagcgtcttcttcaagaagatcgacggagccggccag
ttctacgacccgcacatccagcgcttcggactcctcctgcccaaatacatcagcatggag
cacgccttttatatgtctccggaggtgtccaagaactgtcagtggtaccagagtgaccag
ccctggcaatttcccttcaagcattctcaaaagctagagaagcatgagaaacaccacgtg
aaccaggttgcgcacccagccaagagcaaagaagtggtgacggaggaggagctgcacgtg
gccaacgtgacgtccagcagcatgaggctccactgggccacctcggacagcaagggcacg
ggccaccaccaggtgacggtgacgcggctgagcgaccacgccctggccctgcagaagaac
gtgacgggcaccgagctgctcctggagggcctggagagcgcgcagaagtaccacgtggtg
gtcgccacccacgcccacggcaagcccgtgcgcacacacaagggcatcgtcagcaccaaa
gcagcggagaaaaagacagagactccagcccaagtgaccgctgctctgcccactgctccc
ctggacaatccagagctcgttaatgagaatgcagacccgtgcgcacttgattttgacttc
ggaatgccatgcaaagactataaggctaagtggttctttgacaaaaacaacgggatctgt
agccagttctggtatggtggttgtggagggaatgccaatagattcgagactgaggcccag
tgcatgagacgctgcttgaaaacatcaccagaggctagcgtgcagcaggaacagacctca
gacatacctgccccagctgcccttgttgggacaaacatctgtgagctccccaaggtagag
ggttcatgcgcaaagtttgtcctgaagtggcactacgagtcctccaccaaggcctgtacc
cgcttctggtacggaggctgcgggggcaaccagaaccgctttgacacccaggaggagtgc
cagaaggcctgtggaaaagcagcacctggcaagccagggatcatggcagcaatgagaaca
tag
DBGET
integrated database retrieval system
