Conger conger (European conger): 133117054
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Entry
133117054 CDS
T10633
Name
(RefSeq) collagen alpha-2(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04382
Cornified envelope formation
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04518
Integrin signaling
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133117054
04518 Integrin signaling
133117054
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133117054
09142 Cell motility
04820 Cytoskeleton in muscle cells
133117054
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133117054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133117054
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133117054
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133117054
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133117054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133117054
NCBI-ProteinID:
XP_061083126
LinkDB
All DBs
Position
17
Genome browser
AA seq
1673 aa
AA seq
DB search
MKFEVRKVGSMQLKNMRFLILSVVVCVLLTSEVDAGGKSDSGPCGGRDCSGGCKCFPEKG
ARGPPGPHGPQGVRGPVGRPGEAGVHGPKGEKGEGGRDGSTGPKGAVGQTGVPGFAGADG
IPGHPGQAGSRGKPGADGCNGTHGESGVPGQPGGLGTPGVPGQHGRKGEKGESIKLSVFM
EKFRGDPGDTGLPGIRGPDGSPGLQGSRGYAGPQGPLGYPGPPGPKGEMTMVIKGEKGEP
GDAGEPGLPGNDTFPHTSPSDGFPGKKGEKGLKGEVGALADNKGEDGVMGFPGLRGSSGS
DGEPGETGDIGEAGPQGGDGLKGERGEPGPVLFIGGTHGAGPRGPSGQPGYKGERGEPGE
KGLPGLPGVPGISSGQSVVNISPFGPKGLKGSKGLQGEPGPDAQFPGRPGFDGFPGRPGP
PGAKGSWANAFQGPEGESGQPGRAGLQGPKGDRGLCECGIVTSPPGPAGPAGKEGSPGMV
GEWGRQGDQGPPGHTGPPGLPGFPGIKGGPGPKGRKGDTIVITEKGHPGDPGDAGLDGGH
GEKGRPGFSGLPGAPGLRGAQGEGPVGSPGEKGFPGVPGRLGPEGLAGEPGRAVGAQRGP
RGLPGDAGLHGFPGATGTPGAPGGCVLEGSGEQTDAEGECDTLPGPMGDQGIPGIPGIAG
FPGVPGLKGVHGLPGEAGFKGEQGEQGRGGIPGPPGFSGVRGDEGQPGGRGADGPAGLPG
LPGRDGEDGQKGEHGVVFGAAPGAPGDQGRPGLQGTWGPRGETGTEGYHGMPGMPGILGA
KGDGGPPGLQGEEGRPGPAGKYGFPGAPGPAGSPGPVGFIGGPGFPGDRGNQGDPGPPGP
HGMKGSPGEPGNSGAKGIDGSQGDPGNSGPVGFSGTPGPRGLKGSSGMAGFSGMEGVKGL
SGVPGEKGELGFPGVEGLKGGMGRHGEKGERGLVGPPGEKPHIPRQEIAKMKGAKGEDGK
PGEPGFTGPRGPKGFPGVPGRTGSDGMPGDPGEEKGVVGDPGAGGLPGYKGMPGPTGLPG
ISGFPGMTGTTGEKGTPGAYGPSGDPGLKGKKGEEGAVIDLPGSPGVRGDFGVPGFPGRK
GVGGQVGDRGGPGFHGIEGLKAESGDPGPDGRPGVDGKTGSPGDPGQKGFSGTPGQTGSS
GFPGTPGHRGFPGLKGIFGLHGLKGQKGIHGTPGLDDWGQPGEPGVKGEQGEPGSPNTQP
GFPGLSGAKGSAGEPGDPGQPGAPGFQGPQGPHGEPGKLGLSGDPGAKGPKGFQGFPGVR
GTPGIPSAFGDKGEKGLPGLFGRKGLQGLQGDPGRPGAQGQHGVSGKKGLRGEQGLMGIP
GRAGVQGDRGPVGPKGNPGPQGYAGLPGSPGEAPKPPKHLGEQGPRGVQGIRGPEGVYGE
NGPHGPPGNLGLIGPKGQKGMPGIGGTPGTPGYRGEGGQTGLQGLQGLEGSPGRPGTPGI
AGMAGRSVSVGYLLVKHSQSEQTPMCPVGMAKLWDGYSLLYLEGQEKAHNQDLGLAGSCL
PRFNTMPFIYCNPGDLCYYASRNDKSYWLSTTAPIPMMPVEEAEIQPYISRCSVCEAPSV
AIAVHSQDVTIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIEC
NGAKGACHYFANEHSFWLTSVDQAFQTTPQMETLKGGQLLSRISRCQVCMKNL
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaggttcgaaaagtcgggtcgatgcagctgaaaaacatgaggtttctgata
ctctctgtggtcgtctgcgttctgctgacgtcggaagtggacgcgggcgggaagagcgac
agcggaccgtgtggagggagagactgcagcggggggtgcaagtgcttcccagagaaaggt
gcacggggcccacccgggccccacggcccccagggcgtccggggccccgtcgggcggccg
ggcgaggcgggggtccacggccccaaaggagagaagggggaaggcgggcgagacggcagc
accggacccaaaggcgccgtgggccagaccggcgttcctgggttcgccggtgcggacgga
attcccggccaccccgggcaggcggggtctcgcgggaaaccgggcgccgatggctgcaac
ggaacccatggggagtcgggggttccagggcaaccaggtggtctgggcactccaggtgtc
ccggggcagcatggcagaaagggagagaagggggaatccataaagctcagtgtgttcatg
gagaaatttcggggggatccaggtgacactggcttgcccggaatacgtgggccagatggt
tccccaggtttgcagggctccaggggctatgctgggccccagggcccccttggatatcca
ggtccccctgggccaaagggggaaatgaccatggtcataaagggagagaagggagagccg
ggggacgccggagagcctggtctccctggaaacgacaccttcccccacacctccccctcc
gacggctttcccggcaagaaaggagaaaaaggtttaaagggtgaagttggagctttggct
gataacaagggggaagatggagtcatggggtttccaggactacggggaagttcaggttcg
gacggggaaccgggagagacgggagatatcggtgaagcaggaccacagggaggggacgga
ctcaagggagagagaggagaaccaggaccagtgttgtttattgggggcacacacggagcg
ggtccacgcgggccgtccggacagcccggctacaagggggagagaggcgagccgggagag
aagggtcttccaggtctcccgggagttcccgggatctccagcggtcagagcgtggtgaac
atcagcccgttcgggcccaaggggctgaagggatccaagggtctgcagggagaaccggga
cccgacgctcagttccccgggcgccccggtttcgatggctttcccggccgcccgggcccc
cccggcgccaaaggatcatgggcgaatgcgtttcaaggtcctgaaggggaaagcgggcag
ccaggccgcgcaggactgcagggacccaaaggtgatcgaggattgtgcgagtgcggcatc
gtcacctctccgcccggacccgcgggcccggcggggaaagagggcagccccggcatggtg
ggcgagtgggggcggcagggcgaccagggccccccaggacacacgggcccccccgggctg
cctgggttccctgggataaagggcggcccagggcccaaggggagaaaaggagacaccatc
gtgatcactgagaaaggacatcctggagacccaggagacgctggactcgatgggggccac
ggggagaagggccggcctgggttttcggggctcccaggggctcccggactgcgtggcgcc
cagggggaagggccggtcggatctccgggagagaaggggttccccggggtcccgggccgg
ctggggccggagggtctggcgggggagccggggcgcgcggtgggggcgcagaggggccct
cgcggcctccctggcgatgccgggctccacggtttcccgggcgccacgggaacacctgga
gctccaggaggctgtgttctggaaggttctggagagcagactgatgcggaaggagagtgt
gatacattgccaggtccaatgggtgatcaaggcattcctggaattcctgggattgctggt
ttcccaggagtgccgggtcttaaaggggtgcatggattacccggggaggcgggcttcaag
ggggagcaaggagagcaagggagaggagggatcccaggaccacccggtttctctggggtg
cgtggggatgaggggcagcccggcggtcgaggggcagacggacccgcgggtctgcccggc
ctgccggggcgggatggggaggacggccagaagggggagcacggggtggtcttcggggcg
gcccccggagcccctggagatcagggccgccccgggctccagggcacctggggcccccga
ggggagaccggcaccgagggataccacggaatgcccggaatgcccggtatcctcggagcc
aaaggggacggcggtccccccggcctgcagggggaggaagggaggccaggcccagctggg
aagtatggattcccaggggccccgggaccagctggctccccagggcctgtcgggttcatc
ggtggcccaggatttcctggagacagaggaaaccagggtgacccaggtccgcctgggcct
cacgggatgaaaggctcacctggggagccaggtaactctggagcgaagggaatagacggc
tcacaaggtgatccaggaaactcaggtccagtgggcttttctggaactcctggaccacga
ggcttgaaaggctcatcaggaatggctggcttttccgggatggaaggagtgaagggattg
tcgggcgttcccggcgagaagggggagctggggttccccggggtcgaggggctgaaaggc
ggaatggggaggcacggggagaagggtgaacgagggctcgtgggacctccgggcgagaag
ccacacatcccgcggcaggagatcgccaagatgaagggggccaagggcgaagacggaaaa
ccgggagagccgggattcactggcccccgagggcccaaagggtttccaggcgtccccggg
aggacgggcagcgacggcatgccaggggaccccggcgaggagaagggagttgtgggcgat
ccgggcgccgggggacttccggggtataagggaatgccgggtcccaccggcttgccggga
atctccggctttccgggaatgacgggaacgacgggggagaagggaactcccggagcttac
ggaccgagtggagaccctggactgaaggggaagaaaggggaggagggtgccgtcatcgac
ttacctggctccccgggcgtgagaggggactttggcgtacctggatttccaggacgtaag
ggcgtcggcggccaggtcggagaccggggcggtcctggtttccacggcatcgagggcctg
aaagcggagagcggggaccctggccctgacgggcgcccaggcgttgatgggaaaacaggc
tctccaggagacccggggcagaagggcttttccggaacgccgggacaaacgggatccagc
ggatttcccgggacacccgggcacagaggttttccgggtctgaagggaatttttggactc
cacggcctgaagggccaaaagggaatccatggaacgccaggtctggacgactgggggcag
ccgggggagccgggggtgaaaggagagcagggagaaccggggagccccaacacgcagccc
gggttccccgggttatccggagccaagggctccgccggagaaccaggtgacccaggccag
ccgggagcccccgggtttcagggaccccagggcccacacggagagcccggcaagctgggc
ctcagcggggacccaggagcgaagggaccgaagggatttcaagggttccccggggtcagg
gggactccgggcatcccctcggcgttcggggacaagggggagaagggcctgccgggcctg
ttcgggcggaagggtctgcagggcctccagggagatccgggtcgacccggcgcccaggga
cagcacggcgtgtccgggaagaaaggtctgaggggggagcaggggctgatgggaattcct
ggaagggctggtgtccaaggagacaggggacctgttgggccaaagggaaaccctggacct
caaggttacgctggactccctggttctccgggtgaggctcccaaaccacccaaacatttg
ggggagcaagggcctcgaggtgtgcagggaattcggggtcctgaaggcgtctacggagaa
aacggcccccacggtccaccgggcaacctgggattaattggccccaagggccagaaaggc
atgccagggatcggtggcaccccggggacccctggttaccgtggcgagggcggacagaca
ggcctccagggacttcagggcctggaagggagtccggggcgccctgggacccccggtatc
gctggcatggcggggcgcagcgtgagcgtggggtacctgctggtgaagcacagccagtcg
gagcagacgcccatgtgccccgtgggcatggccaaactgtgggacgggtacagcctgctc
tacctggagggccaggagaaggcccacaaccaggacctgggcctggcgggatcctgcctg
ccccgcttcaacaccatgcccttcatctactgcaaccccggcgacctctgctactacgcc
agccgcaacgacaagtcctattggctgtccaccaccgcccccattcccatgatgcccgtg
gaggaggcggagatccagccctacatcagccgctgctcggtctgcgaggcgccctccgtg
gccatcgcggtgcacagccaggacgtcactatcccacaatgccccgcgggctggcgcagc
ctctggattggctactccttcctcatgcacacggcggcgggcgatgagggaggcggccag
tctctggtgtcccccggctcctgcctggaggacttccgcaccacgcccttcatcgagtgc
aacggcgccaagggcgcctgccactacttcgccaacgagcacagcttctggctcacctcc
gtcgaccaggccttccagaccaccccccaaatggagacgctgaagggcggccagctcctg
tctcgaatcagccgctgtcaggtgtgcatgaagaacctgtga
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