Conger conger (European conger): 133117728
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Entry
133117728 CDS
T10633
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccog03009
]
133117728 (ddx21)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133117728 (ddx21)
Enzymes [BR:
ccog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133117728 (ddx21)
Ribosome biogenesis [BR:
ccog03009
]
Eukaryotic type
Pre-60S particles
Helicases
133117728 (ddx21)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
133117728 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
133117728
NCBI-ProteinID:
XP_061083310
LinkDB
All DBs
Position
2:complement(31879171..31912703)
Genome browser
AA seq
704 aa
AA seq
DB search
MPVKITMTSEYIEMENNMGTSLAEKKSMKKCKKEKTKKGKLNKKKEVKVEVECDPPVPKK
KKKDDTTKGSSKKKSNDVNSNLDNGTPVMKTPSHSSEESSSGSEHDNSIKEETPEKKEGA
FSNFRISKEMIKNLQGRGVSYLFDIQVKTFNSVYDGKDVVAQARTGTGKTFSFAIPLVEK
LLAETEERRRGRAPKVLVLAPTRELALQVSKDFKDITKKLSVTCFYGGSSYVPQLDSIRN
GIDILVGTPGRVKDHLQNNKLNLSLVRHVVLDEVDQMLDMGFSEQVEEILASSYKKDSDC
NPQTLLFSATCPSWVYDVAKKYMRPQFEHIDLIGKKTKKTATTVEHLAIACHWSQRAAVI
GDVIQVYSGSHGRSIVFCETKKEASELSMNTSIKQDAQSLHGDIPQKQREMTLKGFRNGS
FEVLVATNVAARGLDIPEVDLVIQCSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEE
QLRYVENNAGITFKRVGVPSANEIIKSSSKDAVKYLDSVPTTAIDYFREAAKKLIEQRGA
VEALAAALAHISGATAIEQRSLLNSDAGYTTMLMKCSQEMHSISYAWKSLKEQLGEDMDN
KIQRMTFLKGKTGVCFDVPTAKVKEIQEVWQDGRRWQLSAATELPELEESKRTDGDRGSG
RFNGRRAGRGGGGRGSWNHSNRRGGGREGSGRGQKRSFSRAFDY
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaaagatcacaatgactagtgaatatatcgaaatggaaaacaacatggggacc
agtttggcggagaaaaaatcaatgaagaaatgtaaaaaagaaaagaccaagaaaggaaag
ctgaataaaaagaaagaagttaaagtggaggttgagtgtgatccacctgttcccaagaag
aaaaagaaagatgacactactaaaggaagctcaaagaagaagtccaatgatgtcaacagc
aacttggataatggaacgccagtaatgaaaactccatctcattccagtgaagagtcctcc
agtggctctgaacatgataattcaatcaaggaagagactccggaaaagaaagaaggtgca
ttctccaacttcagaatctcaaaagaaatgataaaaaaccttcaaggacgaggtgtgtcg
tacctatttgatatccaagtcaaaaccttcaactctgtttacgatggaaaagacgtggtg
gcacaggccagaacgggcacagggaagaccttctcttttgccattccccttgttgaaaag
ctactggcagaaactgaggagaggaggagaggccgagctccaaaggtcctggtccttgca
ccaaccagagaactggctcttcaagtgtccaaggattttaaagatatcacaaaaaagcta
tctgtgacctgtttctatggtggcagctcctacgtcccccaactggatagcatccgcaat
ggcatcgatatccttgtgggcacaccagggcgtgtgaaagatcatcttcagaacaacaaa
ctgaacctgtccctggtgaggcatgtggtccttgatgaagtcgaccagatgctggacatg
ggcttttctgaacaagttgaagagattctagcatcttcctacaaaaaagattcagactgc
aatcctcagaccctgctcttttctgctacctgtccctcctgggtgtatgatgtggccaag
aagtacatgcggccacagttcgagcacatcgacctcattggcaaaaagacaaaaaaaact
gccaccacagtggagcatctggctatcgcctgtcactggtctcagagggcggcggtcatt
ggagatgtaatccaggtgtatagtggcagccatggccgctccatagttttctgtgagacc
aagaaggaggccagcgagctgtcaatgaatacctccataaaacaggatgcccagtcatta
catggagacattcctcaaaaacagagggagatgacactgaaaggattcaggaatgggtcc
tttgaagtcctggtagccacaaacgtagcggctcgagggctcgacattccagaagttgac
ttggtcatacagtgttctccaccaaaggatgttgagtcttatatccacaggtcagggcga
acaggcagagcgggcaggacaggtatctgcatttgcttctaccagcgcaaggaagaggaa
cagcttcgatatgtggaaaacaatgccggcataacatttaaacgggttggtgtcccatct
gccaatgagatcatcaaatcctccagtaaagatgcagtgaagtatttggattctgtaccc
acgactgccattgattatttccgtgaggctgcaaagaagctgattgagcagcggggggca
gtggaggccttggctgctgccctggcccacatatctggtgctaccgcaattgaacagcgc
tccctcctcaactccgatgcaggctacacaaccatgctgatgaagtgctcacaagagatg
cacagcatcagttatgcctggaagagcctaaaggagcagcttggagaggacatggacaat
aagatccaaaggatgactttcctcaagggcaagaccggtgtttgttttgatgttccaact
gctaaggtgaaagaaatccaggaagtgtggcaggacggtcgacgttggcagctgtctgct
gccacggagcttcctgagctggaggagagcaaacgcactgatggtgaccggggatctggg
cgattcaatggtcgccgtgcaggaaggggaggaggtggaagaggctcctggaaccacagc
aacaggagagggggaggcagggaagggtcaggaagaggtcagaaacgtagttttagtcgg
gcctttgattattaa
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