Conger conger (European conger): 133118227
Help
Entry
133118227 CDS
T10633
Symbol
atg4da
Name
(RefSeq) cysteine protease atg4da isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ccog Conger conger (European conger)
Pathway
ccog04136
Autophagy - other
ccog04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133118227 (atg4da)
04136 Autophagy - other
133118227 (atg4da)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccog01002
]
133118227 (atg4da)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133118227 (atg4da)
03029 Mitochondrial biogenesis [BR:
ccog03029
]
133118227 (atg4da)
Peptidases and inhibitors [BR:
ccog01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
133118227 (atg4da)
Membrane trafficking [BR:
ccog04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
133118227 (atg4da)
Mitochondrial biogenesis [BR:
ccog03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133118227 (atg4da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Amelotin
Motif
Other DBs
NCBI-GeneID:
133118227
NCBI-ProteinID:
XP_061084038
LinkDB
All DBs
Position
2:complement(69874865..69885328)
Genome browser
AA seq
549 aa
AA seq
DB search
MCTFGKTPLPSMTAAQKSNQSVMAYKMRVCEGFAGNAWSCCPLSPAVVMNSVSPTAAQYL
GGSMQDEGLAPRPERRRTPSWEPRGHFGHGAGSEPIREAPGEPDEVDRLKAKLMSAWNNV
KYGWSVKTKTSFNKTSPLILLGQSFLLNHEDEVERFRLAFVSRLWMTYRREFPQLEGSTL
TTDCGWGCMLRSGQMLLAQGLLVHLLPPGWTWPDAQQLTDVDMELLKPRSPSRTGGVPVP
SFPTARAPNSTPRGRSSAGGEGSKRGQRRGTETSRDRQTEATHRRVASWFGDQPQAPFGV
HQLVELGRSSGKKAGDWYGPSIVAHILRKAVGKTSEVHNLAVYVAQDCTVYKEDVVQLCD
LSLAEGSEPSPGWKSVILLVPVRLGGESLNPSYIECVKNILRLECCIGIIGGKPKHSLFF
VGFQDEQLLYLDPHYCQAVVDVTQANFPLESFHCSSPRKMSFSRMDPSCTIGFYAKNQKD
FESLCSAVSEALSSSKEKYPIFTFVEGKGQDYGLEGQSGPPGNSPAHILPPGRPSRSTKR
SSVDEFVFL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactttcggcaagacgcccctgccatcgatgacggcggcgcaaaaatcaaatcag
tcagtcatggcttacaagatgagagtgtgtgaaggtttcgctggcaatgcgtggtcctgc
tgcccactgtctcccgctgtggtaatgaattcagtgtcccccaccgcggcacagtacctg
gggggcagtatgcaggacgaggggctggccccgcgtcctgagcgacggaggaccccgtcc
tgggagccccggggccactttgggcacggcgcggggtcggagcccatcagggaggctcct
ggagagcctgacgaagtggaccggctcaaagccaagctgatgtccgcctggaacaacgtc
aaatacggctggtcagtcaagactaaaaccagcttcaacaagacctcccctctgatcctg
ctgggacagtcctttcttctcaaccatgaagacgaggtggagcgtttccggctggccttc
gtgtcgcggctgtggatgacgtaccgccgcgagttcccccagctggagggctccacgctg
accacggactgcggctggggctgcatgctgcgcagcgggcagatgctgctggcccagggc
ctgctggtgcaccttctcccgccaggttggacttggccggatgcccagcagctcactgac
gtggacatggagttgctgaagcctcggtctccgtcccgcaccggaggggttcccgtcccc
tcctttcccaccgcgcgggccccaaactccaccccgaggggccgcagcagcgctgggggc
gagggctcgaagcggggccagaggaggggtaccgagaccagccgggacaggcagacggag
gccacacaccggcgtgtggcatcctggttcggggaccagccccaggccccgttcggggtg
caccagctggtggagctggggaggagctcggggaagaaggctggggactggtacggcccc
tccatcgtggcacacattctccgaaaagcagttggtaagacctcggaggttcacaacctg
gctgtgtacgttgctcaggactgtactgtgtacaaagaggacgtggtgcagctgtgtgac
ctgtctctggccgagggctctgagcccagtccggggtggaagtccgtcatcctcctggtg
cccgtgcgactgggcggggagtcgctgaacccctcctacatcgagtgtgtgaagaacatc
ctcaggttagagtgctgcattgggatcattggtggtaaacccaaacactcactgttcttc
gttgggtttcaggacgagcagctgctgtatttggacccgcactactgtcaggctgtggtg
gacgttacgcaagccaacttcccactggagtcttttcactgcagctctcccaggaagatg
agcttcagccgcatggaccccagctgcaccatcggcttctatgccaagaaccagaaggac
ttcgagtccctgtgttctgctgtgagcgaggctctctcttcatccaaggagaagtaccca
atttttacttttgtggagggcaaagggcaagactatgggctggagggccaaagtgggccc
ccaggcaactcccccgcccacatcctccccccgggtcgacccagccggagtactaagagg
agcagtgtggatgagtttgtgttcttgtga
DBGET
integrated database retrieval system
