Conger conger (European conger): 133118644
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Entry
133118644 CDS
T10633
Symbol
ldb3a
Name
(RefSeq) LIM domain-binding protein 3a
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccog Conger conger (European conger)
Pathway
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133118644 (ldb3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccog04990
]
133118644 (ldb3a)
Domain-containing proteins not elsewhere classified [BR:
ccog04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
133118644 (ldb3a)
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
133118644
NCBI-ProteinID:
XP_061084753
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All DBs
Position
18:22858076..22911190
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AA seq
867 aa
AA seq
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MGSYNINLAGPAPWGFRLQGGKDFNMPLTISRITPGSKAAQCNLMQGDMIVAIDGVSTEG
MTHLEAQNKIKCANFNLALTMQRSKRPVPMPTGPPRIECLPIIPHQKIITSPAPNTEYTT
SFNPGVLKDSALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQTQARGPE
APSTLPVKDPIVDSASPVYQAVINTNDQDQEFSDWARRTTHLQSKSFRVLAHLTGTEYLQ
DPDEEALRRSREMFESEAKGPRFAKLKNWHNGLSAQILNLAVDEETSPSLPDTPIEHAPV
STIPMPTALPADAPVDAAAPVDAAPVDAAPIDAAAPVDAAAPVDAAAPVDAAAPVDAAPV
DAAPVDAAPVDAAPVTDDATANDAAATAAADAPDDAASPSEPAAAPEPVANDVAPAPPAA
PAPAPGPAPVAPAPESTPAPPKSEAPVAPAAPVAPVAPVAPAGPRHLSLAASTISTALSH
SSNPGPPPTTALEALSITPIFRTRTLPKRVRPLPKGRPYHLSFNMQPSGYATHHKSPPSR
PPPQAPPMQHSSIQIPMGQPPHKVVSTATIPPAHAYPPPAPAPVRVPAPAPAPAGGPGDN
RPPWITDGGFAQKFDPSKTTTTTTKKIQPLPQAAPPPPAYIPNPHQGPPAPIPAYNPAPA
FNPAVLPIPPVARGVAQRAERFAASSRTPLCGACNNVIRGPFLVALGRSWHPEEFNCNYC
HTSLADVSFVEEQSAVYCENCYGEFFAPTCSRCSTKIMGEVMHALRQTWHTTCFVCAACG
KPFGNSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVC
HINLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgggcagttacaacattaacctggccggacctgccccctggggtttccggctgcaaggg
ggaaaggatttcaacatgcccctcaccatctccaggatcactccagggagcaaggcggcg
cagtgcaacctgatgcagggggacatgatcgtggcgatcgatggggtgagcaccgagggc
atgacccacctggaggcccagaacaagatcaagtgtgccaacttcaacctggcgctcacc
atgcagaggtcgaagcgtccagttccaatgcccacaggtcccccaagaatcgagtgtcta
cctatcatccctcaccagaagatcattaccagccctgctcccaacactgagtacaccacc
agcttcaaccccggtgtgctgaaggactccgccctctccactcacaagccaatcgaggtc
aagggtcccggggggaaggccactatcatccacgcccagtacaacacccccattagcatg
tactcccaggacgctatcatggacgccatcgctggccaaacccaggcccgaggccctgag
gcacccagtacgctccccgttaaagaccctatcgtagacagtgcctccccagtctatcag
gccgtgatcaacacgaacgaccaggaccaggagttctctgactgggcacgccgcaccacc
cacctgcagtccaagtccttccgcgtcctcgcccacctgacgggaaccgaatacctgcaa
gacccagacgaggaagctctgaggagatcaagggaaatgtttgagtcagaagctaaaggc
ccacgctttgctaaattgaaaaactggcacaacggcctgtcggcacagatccttaaccta
gcggtagacgaagaaactagccccagcctgccagatactcctattgagcatgccccggtc
tccacaatccccatgcccactgctctgcctgctgatgctcctgttgacgctgctgctccc
gttgacgctgctcctgtcgatgccgctcctattgacgctgctgctcctgttgacgctgcc
gctcctgttgacgctgccgctcccgttgacgctgctgctcccgttgacgctgcccctgtt
gacgctgctcctgtcgatgctgctcccgttgacgctgcccctgttactgatgatgctact
gctaacgacgctgccgctactgccgctgctgacgctcctgacgatgctgcttcgcccagc
gagcccgcagctgcgccagagcccgtagccaacgatgtggcgccagctcctcccgccgcc
ccggctcccgccccggggcctgctcccgtagcccccgccccagagagcacaccggcaccc
ccaaagtctgaggcccctgtggcccccgcggcccccgtggcccctgtggcccctgtggcc
cccgcagggccccgccacctgtctctcgccgcctccacaatctccacagcactcagtcac
tctagtaacccggggccgccccctaccacagcactggaggccctgtcaatcaccccgatc
ttccgcaccagaactctgcccaaaagagtgcgccccctgcccaaggggaggccctatcac
ctcagcttcaacatgcagccgtccggttacgccacccaccacaaatcccctccttccagg
ccacccccccaggccccgcccatgcagcacagctccatccagatccccatgggccagccc
ccacacaaggtggtcagcaccgccaccatcccgccagcccacgcctaccctcctccggct
cccgctccggtccgtgttcccgctccagctccagcccctgctgggggccccggggacaac
aggcctccctggatcaccgacggcggctttgcccaaaagtttgaccccagcaagaccacc
actaccacaacgaaaaaaatccagcccctgccccaagccgctcccccacccccggcctac
atccccaaccctcaccagggcccccctgcccctatccctgcttacaaccccgccccggcc
ttcaaccccgccgtcctccccataccccccgtagcgcgcggtgtggcccagagggccgag
cgcttcgctgccagcagccggacaccgctctgcggagcctgcaacaacgtcatcaggggg
cccttcctggtggcactggggcggtcctggcatccggaggagtttaactgtaactactgc
cacacgtctctggcggacgtgagcttcgtggaggagcagagtgccgtgtactgcgagaac
tgctacggggagttcttcgcccccacctgctcccgctgcagcaccaagatcatgggggaa
gtgatgcacgccctaaggcagacgtggcacaccacctgctttgtgtgcgcggcctgcggg
aagcctttcggaaacagcctgttccacatggaggacggggagccctactgtgaaaaagac
tacgtcgccctcttcagcaccaagtgccatggctgcgacttcccggtggaggctggggac
aagttcatcgaggctctcggccacacctggcacgacacctgcttcgtctgtgcggtgtgc
cacatcaacctggagggtcagccgttctactccaagaaggacaagcccctgtgtaagaag
cacgcccacgccatcaacgtatag
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