Conger conger (European conger): 133118974
Help
Entry
133118974 CDS
T10633
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133118974 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccog03041
]
133118974 (ddx5)
03009 Ribosome biogenesis [BR:
ccog03009
]
133118974 (ddx5)
Enzymes [BR:
ccog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133118974 (ddx5)
Spliceosome [BR:
ccog03041
]
Complex A
U1 snRNP components
U1 related factors
133118974 (ddx5)
Complex B
133118974 (ddx5)
Ribosome biogenesis [BR:
ccog03009
]
Eukaryotic type
Pre-60S particles
Helicases
133118974 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
133118974
NCBI-ProteinID:
XP_061085312
LinkDB
All DBs
Position
2:73656375..73662117
Genome browser
AA seq
616 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGAPRFGGSRGGPPQGKFGNPGERLRKKHWNLDELPKFEKNFYQE
HPDVTRRPAQEVEQYRRTKEVTVKGRDCPNPMLKFHEASFPTYVMDVITKQNFTDPTPIQ
SQGWPLALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPFLEHGDGPICLVLAPTRELAQ
QVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRR
CTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQIN
VGALQLSANHNILQIVDVCNDGEKDDKLLRLLEEIMSEKENKTIIFVETKRRCDDLTRRM
RRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINYDYPNS
SEDYIHRIGRTARSQKTGTAYTFFTPGNMKQASDLISVLREANQAINPKLIQMVEDRGGR
SRGGRGGYKDDRRDRYSGGRRDFGSFRDRDNDRGFGAKKVFGTKTQNGGYGGSSYDNSSS
GFANGYGNCGQSNFGGAATQAGTFGNQNFQNQQFGGNQGTGQNGMSHPQFPFNPQQQPQQ
PPQPMVPYPMPPPFPQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattttcagacagagatcgcggtagagacagaggatatggcggtgcgccacgt
tttggaggaagtcgtggtgggcctcctcagggaaagtttggaaatcctggggaaagactg
cgtaagaaacactggaacttggatgagctcccaaaatttgagaagaatttctaccaggag
catcctgatgtcactcggaggccagcgcaagaggttgagcaatacaggagaactaaagag
gtcaccgtgaaggggagggactgcccaaaccctatgctcaaatttcatgaagccagtttt
ccaacttatgtgatggatgtgatcaccaagcaaaatttcacagaccccacccccattcag
tcacaaggctggccattggctttaagtgggaaagatatggtcgggattgcgcagactgga
tctggcaaaacccttgcgtatctgctgcctgcaattgtgcacattaatcaccaacctttc
ctggagcacggtgatgggccaatctgtttggtgcttgcccctactcgtgagttggcccag
caagtgcaacaggtcgctgctgaatatgggagagcatctcgactgaagtctacctgtatt
tatggaggtgcccccaagggaccacagatccgtgatcttgaaagaggtgttgaaatttgc
attgctacacctggacggctcatcgacttcctggaagttggaaaaacaaacttgcgtaga
tgcacttacctcgttctggatgaggcagacagaatgctcgacatgggcttcgagccacaa
atccggaaaattgtggaccagatcagaccagaccgtcagacactcatgtggagtgctact
tggcccaaagaagtacgtcagttggctgaagacttcctgaaggactacgtccagatcaac
gtgggggcactgcagctgagcgccaaccacaacatcctgcagatcgtggatgtgtgcaac
gatggagagaaggatgacaaactcctccgcctgctggaagaaatcatgagcgagaaggag
aacaagaccatcatcttcgtggaaaccaagaggcgatgcgatgacctcaccaggagaatg
aggagggatggctggccagcaatgggcattcatggagacaagagtcaacaggagagggac
tgggttctcaatgaattcaaatacggaaaggctcccatcctaattgccacagatgtcgcc
tccagaggtttagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcc
tctgaggactatattcaccgcattggaagaactgcccgcagtcaaaaaacgggtacagcc
tacaccttctttactcctggcaacatgaaacaagccagcgacctcatctctgtgcttcgc
gaggccaatcaggcaatcaaccccaagctgatccagatggtggaagacagaggaggtcgt
tcaagggggggaagaggtggctataaagacgaccgacgggataggtattctggcgggagg
agggattttggtagctttagggacagggataacgacaggggtttcggagcaaagaaggtt
tttggcacaaagacacagaatggaggctatgggggcagcagctatgacaacagcagcagt
ggctttgcgaatggctatggtaactgtggacagtccaactttggtggtgctgcgactcaa
gctggcacattcggaaatcagaatttccagaaccagcagtttggaggaaaccagggcact
ggtcagaatggcatgagccatccccagttcccctttaacccgcagcagcagcctcagcaa
cctccacagcccatggtcccctaccccatgcctccacctttccctcagtaa
DBGET
integrated database retrieval system
