Conger conger (European conger): 133119420
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Entry
133119420 CDS
T10633
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133119420
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
133119420
3'-5' decay
Other 3'-5' decay factors
133119420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
ResIII
UvrD-helicase
PAM2
nSTAND_NTPase5
zf_CCCH_4
Mov-10_helical
PhoH
AAA_22
AAA_16
zf-CCCH_4
AAA_7
Motif
Other DBs
NCBI-GeneID:
133119420
NCBI-ProteinID:
XP_061085999
LinkDB
All DBs
Position
2:complement(73292538..73368974)
Genome browser
AA seq
1930 aa
AA seq
DB search
MADRRPEKSCEEASESLARREYEAAVSHCSEALLVLDLQPPSPRAVPLRSRALLLRIAAL
LQLKNYDQADEDCKHVLAEELAEGDGSLQAGLHSMLLDGSLQEVSSILSKALFGEPLNGI
VTKDLTRLKMLLSEIEAVSSKMASEYTEDNVEVQDGWQFRPPPRGVTSSEEYTLCKRFLE
QGLCRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQQESKHFTENYMEALIEKWMNSLSP
EKVLSDYLDGVNVEHSSDLSVTVTTKKSSHSWTFSLLCKPARSLYRIALLYDAHRPHFSI
TAVAAGDASAQMLQEVPAACQEWTGAGLAQNGMDHCLYTVTVGFSTEIFGTFRQTIVFDF
GSEPVLMQRVMVDAASIEDLEHLKQARQQLLMTAKRWDSSCKTIVEFGPNETMELEKSLL
ARYQIPLSADQLFTQSVLDKMLTRENYQARLHDLLYIEEIAQYKEVSKFNIKVNLQLVTS
FMLTGISGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNSVLLLPLNREWSSQLPG
VKERVYEALIEEKTKEYIFLRICRDCCEELCLQPDRELQVELQFQLNRLPLCEMQYALDR
IKDNGILFPDVSLTPTIPWSPNRQWDEQLDPRLNAKQKEAILAITTPLSVQLPPVLIIGP
YGTGKTFTLAQAVKHILKQPDTRVLICTHSNSAADLYIKDYLHPYVEAGNPHARPLRVYF
RNRWVKTVHPVVQQYCLISSTHFTFQMPERDDIIKHRVVVVTLSTSQYLCQLDLEPGLFS
HILLDEAAQAMECETIMPFALASKSTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLY
EHYPAEYPCRILLCENYRSHEAIINYTSELFYDGKLMASGKQPSHKDFYPLTFFTARGED
VQEKNSTAYYNNAEVFEIVERVEEMRKKWPVAWGKLDEGSIGVVSPYADQVFRIRAELRK
KRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQLVEDSTEDLDYGFLS
NYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWERFISICHENSSLHGITFQQIKAQL
EALELKKTYVLNPLAPEFIPRALRPQHPQGFSKQQQQQSPPKGKGQHASQAEHFPPDGFV
QPNPAVLXGNPIRAFTPPLGGAPAVGKSPSPVQRIDPHTGASILYVPAVYGGNMVMSVPL
PLPWPGYQGRFVDPRLMSHPAAMAYNMNLLQAQNRGSPVPYGVSHPSPLGVGQQTSPDKE
LLPEASRNGKMDAGVKSEQGRLQTPERKASDLKGKQGEPDPGQNRSPESQDALGFPSARL
HRKDNPGQRPLNFHLAPPNPPMPPHPNSRQFPHQYPMPRPPFRVPQQGGLPPQHLGPMQP
PPSQSQPQHSAQLSPAFPVGNPPFFHTPLHARALQSPTLDGMSGEAPGPDGMAEEPGGSH
RPLPQQLGHPPHPQALPPPARMGGFPEEHPDAMLGEGLDIQEALSQQARLSQWSEHNHLL
QGGVAFPLPQHLAHLAQPGLRFPPQLLRANWRMGGGQDEAGPPFPRFPGLLREMAPQEPG
EQRDPAEMPPPQSRLLQYRQVQPCPPGDLPPPSASPGQGPPPDASRELEMINSPAFQQQQ
QQQQHPASQMYAPAFPPHAPGHSTPPPVKYLLSEGQWAHAGLQQSHMLGQGFPFGLPVMA
HRQEQLHLLQLQQQQQQQQQKSLQQQQQQQQQPPAPGPEPYHPLSPRTLAASSLHSVEEY
EPRGPGRPLYQRRISSSSAQPYPDDSGAPQGVLTQCKDPQDHPHLSYSYPSAEPWPGNSA
PVPFQNIPCNGASTLPHRDLLASSKAMRSAEEHMKTEGVQPPGHSFSSLQQLGQFPPLMP
NKQPAPDPGGGGGGAGPKPPTMSYASALRAPPKPRPLPEQVKKNSDPLSLLQELRIGSSN
STNGYYSYFK
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggaggccagagaagtcatgtgaagaggccagcgaatcgttagcgaggcgg
gagtacgaggcggcggtgagccactgctcggaggcgctcctcgtgctcgacctgcagccc
cccagtccccgcgcagtgcccctccgcagtcgagccctgctcctccgcatcgccgccctt
ctgcagctgaagaactatgatcaagcagatgaggactgtaagcatgtgctggcagaagaa
ctggccgagggagacggctcgctccaggcgggcctccacagcatgctgctggacggcagc
ctacaggaagtgtcctccattctgtccaaggcactgttcggggagccactgaatggaatc
gtgacaaaggatttgaccagactgaaaatgcttctctcggaaattgaagcagtaagtagc
aagatggcctcagaatacacagaagacaacgtggaagtgcaagatggctggcagttccgc
cccccgcctcgaggggtgaccagtagtgaggagtacacgttatgtaaaaggtttctggag
cagggcctgtgcaggtatggggcccagtgcacctccgcacattctcaggaggagctcaca
gaatggcagaagcgctacgcttccagactcatccgtctcaaacagcagcaggagagcaag
cacttcaccgagaattacatggaggccctcattgagaagtggatgaactccctttctcca
gagaaagtgttgagtgactatttggatggggtgaatgtggaacacagctcggatctctcg
gtgacggtcaccacaaagaaatcgtctcactcctggacgttctcgctcctatgcaagcct
gcccggtcgctgtaccgcatcgccctgctgtacgacgcccaccgcccgcacttctccatc
acggcggtggcggccggcgacgcctcggcccagatgctgcaggaggtgcccgcggcctgc
caggagtggaccggcgccgggctggcccagaacggcatggaccactgcctgtacacggtg
accgtgggcttcagcacggagatcttcggcaccttccggcagaccatcgtcttcgacttc
ggctccgagcccgtgctgatgcagagggtcatggtggacgccgcgtcgatcgaggacctg
gagcacctgaagcaggctcggcagcagctcctgatgacggccaagcgctgggactcgtcc
tgcaagaccatcgtggagttcggccccaacgagaccatggagctggagaagagcctgctg
gcgcgctaccagatccccctgtctgccgaccagctcttcacccagtccgtcctggacaag
atgctcacccgcgagaactaccaggcccgcctgcacgacctgctgtacatcgaggagatc
gcgcagtacaaggaagtcagcaagttcaacatcaaggtgaacctgcagctggtgaccagc
ttcatgctcacgggcatctcgggcggcgccaagtacgcccagaacggccagctgttcggc
cgcttcaagctgaccgagaccctgtcggaggacaccttagccggcaggctggtcatgacc
aaggtcaactcggtcctgctgctgcccctgaaccgggagtggtccagccagctgccgggc
gtgaaggagcgcgtctacgaggcgctgatcgaggagaagaccaaggagtacatcttcctg
cgcatctgcagggactgctgtgaggagctgtgtctgcagccagaccgggagctgcaggtg
gagctgcagttccagctgaaccgcctgccgctctgtgagatgcagtatgccctggaccgc
atcaaggacaacggcatcctgttccccgacgtcagcctgacccccaccatcccctggagc
cccaacaggcagtgggacgagcagctggacccgcggctcaacgccaagcagaaggaggcc
atcctggccatcaccacgcccctgtccgtccagctgccccccgtgctcatcatcgggccc
tacggcacgggcaagaccttcaccctggcacaggcggtcaagcacatcctcaagcagcca
gacacccgggtcctcatctgcacccactcaaacagcgctgctgatttgtacataaaggat
tatcttcacccgtacgtggaagcgggcaatccccacgccaggcctctcagggtttacttc
aggaaccggtgggtgaagacggtgcaccccgtcgtgcagcagtactgtctgatctccagc
acgcacttcactttccagatgcccgagcgggacgacatcatcaagcacagggtggtggtg
gtgaccctcagcacctcccagtacctgtgccagctggacctggagcctggtctgttctcc
cacatcctgctggacgaagcggcccaggccatggagtgcgagaccatcatgccgttcgcg
ctggccagtaagagcaccaggatcgtgctggcgggagaccacatgcagctcagcccgttc
gtgtacagtgagtttgcccgcgagaggaacctgcacgtgtcgctgttggaccgtctgtac
gagcactaccccgcggagtacccctgcagaatcctgctgtgtgaaaactaccgctcccac
gaggccatcatcaattacacgtcggagctgttctacgatgggaagctgatggccagcggg
aagcagccctcacacaaggacttctaccccctgaccttcttcaccgcgcggggggaggac
gtccaggagaagaacagcactgcctactacaacaacgctgaggtgtttgagatcgtggag
cgggtggaggagatgcggaagaagtggccggtggcctgggggaagctggacgagggcagc
atcggcgtggtgtcgccctacgccgaccaggtgttccgcatccgcgctgagctgcgcaag
aagaggatgcacgaagtcagcgtggagagggtgctgaacgtccagggtaagcagttccgg
gtgctgttcctcagcacggtgcgcacgcgacacacctgcaagcacaagcagaccgccatc
aagaggaaggagcagctggtggaagactccacggaggacctggactacggcttcctgtcc
aactacaagctgctgaacaccgccatcacccgcgcacagtccctggtggccgtggtggga
gaccccatcgccctctgctccgtgggccgctgcaggaagttctgggagaggttcatctcc
atctgccacgagaacagcagcctgcacggcatcaccttccagcagatcaaggcccagctg
gaggctctggagctgaagaagacctacgtgctcaaccccctggcccccgagttcatcccc
cgggccctgcgcccccagcacccccagggcttcagcaagcagcagcagcagcagtccccc
ccgaagggcaaagggcagcacgcaagccaggccgagcactttccaccggacggattcgtt
cagcccaacccggcggtcctgnatgggaaccccatccgggccttcaccccgcccctgggg
ggcgccccggccgtgggcaagtcccccagccccgtgcagcgcatcgacccccacacgggc
gccagcatcctgtacgtgcccgccgtgtacgggggcaacatggtcatgtccgtgcctttg
cccttaccctggcccgggtaccagggccgcttcgtggacccgcgcctgatgagccacccg
gcggccatggcctacaacatgaacctcctgcaggcccagaaccgcggctcgcccgtgccc
tacggcgtcagccacccctcgcccctgggcgtgggccagcagaccagccccgacaaggag
ctgctgccggaggccagccgcaacgggaaaatggacgcaggtgtgaaatcggagcagggc
aggctacagacgcccgagaggaaggcttccgacctgaaagggaaacagggagagcctgac
ccagggcagaaccggagccccgagtcccaggatgccctgggcttcccgagcgcccggctt
caccggaaggacaatcccggccagaggcccctcaacttccacctggccccgcccaacccc
cccatgccccctcacccaaacagcagacagttcccgcaccagtaccccatgccccggccc
ccgttcagggtcccccagcagggcggcctgccgccccagcacctgggccccatgcagccg
cccccatcccagagccagccccaacactcggcccagctctccccggccttccccgtgggc
aacccccccttcttccacacccccctgcacgcccgcgcgctgcagtcccccacgctggac
ggcatgtccggggaggcccccggccccgacggcatggcggaggagcccggcggctcccac
cggcccctgccccaacagctgggccacccgccgcacccccaggccctgccgccgcccgcc
cgcatgggcgggttccccgaggagcaccccgacgccatgctgggggaggggctcgacatc
caggaggccctcagtcagcaggcccggctcagccagtggagcgagcacaaccacctgctg
cagggcggggtggccttccccctgccccagcacctggcccacctggcccagcccgggctg
cgcttccccccgcagctgctgcgcgccaactggaggatgggcggcgggcaggacgaggcc
gggccgccgttccccaggttccccgggctgctgcgggagatggcccctcaggagccgggc
gagcagagggacccggctgagatgcccccgccccagtcgcgcctcctgcagtaccggcag
gtgcagccctgcccccccggcgacctgccccctccctccgccagccccggccaggggccc
ccgccggacgccagccgcgagctggagatgatcaacagccccgccttccagcagcagcag
cagcagcagcagcaccccgcctcccagatgtacgcgcccgccttcccgccccacgccccc
ggacactccaccccgccccccgtcaagtacctgctgtcggagggccagtgggcccacgcc
ggcctgcagcagagccacatgctgggccagggcttccccttcggcctgcccgtcatggcc
caccggcaagagcagctgcacctgctccaactccaacagcagcagcagcagcagcagcag
aagtccctgcagcagcagcaacagcagcagcagcagccgccggccccggggcccgagccc
taccacccgctgtccccccggaccctggccgcctcctccctgcacagcgtagaagagtat
gaacccagaggacccggcaggccgctgtaccagaggaggatctcctccagctcggcccag
ccttacccggacgattcgggcgccccccagggcgtcctgacgcagtgcaaggacccgcag
gaccacccccatctctcgtacagctacccatccgcagaaccctggcccggcaacagcgcc
cctgtcccattccagaacattccatgcaatggagccagcacacttccacacagggacctt
ttagcgtcatcgaaggccatgcgctcggctgaagagcacatgaagacggagggcgttcag
ccgccgggccactccttcagctctctgcagcagctgggacagttcccccccctcatgccc
aacaagcagccggcccccgaccccgggggagggggggggggcgcgggccccaagcccccc
accatgtcctacgccagcgccctgcgcgccccgcccaaaccccggcctctccccgaacag
gtcaagaagaacagcgaccccctatccttattgcaggaacttagaataggcagttcaaac
agtaccaacggatattattcatattttaaatga
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integrated database retrieval system
