KEGG   Conger conger (European conger): 133120712
Entry
133120712         CDS       T10633                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ccog  Conger conger (European conger)
Pathway
ccog03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccog00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    133120712 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccog03021]
    133120712 (taf5)
   03036 Chromosome and associated proteins [BR:ccog03036]
    133120712 (taf5)
Transcription machinery [BR:ccog03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     133120712 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     133120712 (taf5)
Chromosome and associated proteins [BR:ccog03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     133120712 (taf5)
    STAGA complex
     133120712 (taf5)
    TFTC complex
     133120712 (taf5)
    SAGA complex
     133120712 (taf5)
    SLIK complex
     133120712 (taf5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_DCAF12 Tricorn_2nd WD_LRWD1 VPS8_N Beta-prop_ACSF4 LisH_TPL LisH_PAC1 RAB3GAP2_N
Other DBs
NCBI-GeneID: 133120712
NCBI-ProteinID: XP_061086344
LinkDB
Position
2:9671218..9677491
AA seq 750 aa
MAAVQDGSIEPENEKEMKTEPLNDAAGNHAASVGGVLSTSPVASSVGTPKTNTGSDEQQT
LIAVLQFLKRNKLIESVDILRREAGILEDIDDSQGSEATGTGSGSGGNAGVEGRDATSSL
FNRVSVATTAPSIIATPAPAKGGEDQPDVNVVLSAYSQQGDPVLYPVYYNGLKNFIESVL
DCHRAELSQVFYPLFVHMYLELVYNNHENEAKAFFDKFSGDQECYYQDDLRVLSGLSKKE
HMKGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSK
SQIDSMSGSLAGEAKREANKAKVFYGLLKEPEIEVPLDDEDEEAENEEGKPKKKKPKKDS
MGSKSKKQDPNAPQPNRIPLPELKDSDKLDKIMNMKEATKRIRLGPETLPSICFYSFLNA
YQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRGVKSAADLSLIDKESDDVLERIMD
EKTASESKILYGHSGPVYGISFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVW
DTQFSPYGYYFISGGHDRVARLWATDHYQPLRMFAGHLADITCTRFHPNSNYVATGSADR
TIRMWDILNGNCVRIFTGHKGPIHSLAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKG
HTDTVYALKFSRDGEILASASMDNTVRLWDSVKAFDDIETDDFTAATGHIHLPENSQELL
LGAYMTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggcggcggtgcaagatgggtcgatcgaaccggagaatgaaaaagaaatgaaaacagaa
ccgttgaacgatgcagcaggaaatcacgctgcctcggttggcggtgttctttccacgtct
ccggtcgcatcatcggtcggaaccccgaaaacgaacacggggtccgatgaacagcagacc
ttgattgctgtattgcagtttctgaagaggaacaagttgatcgaatctgtcgatattctg
cgccgtgaagctggcattttggaagatatagacgactcccagggttcggaagcaacggga
acaggatcaggtagtggtgggaatgcaggtgttgagggtagggatgcaacatcctctctt
ttcaaccgcgtgtcagtggccaccaccgccccttcaatcattgcaactccggcgccagcg
aaaggtggagaggaccaacccgacgtaaacgtcgtcctatcggcgtacagccagcagggg
gacccggttctttacccggtttattataatgggctgaagaacttcattgagtcggtgttg
gactgtcaccgagccgaactctcccaagtgttctaccctctctttgtgcatatgtatttg
gagctcgtgtacaacaaccacgaaaacgaagcgaaagcatttttcgataaattcagcgga
gaccaggagtgttactaccaggacgatttgcgcgtgctgtcggggctgagcaaaaaggag
cacatgaaggggaacgagacgctgctggacttccgcaccagcaagttcgtgctccgcatc
tcccgggactcctaccagctgctgaagaggcacctgcaggagcggcagaacaaccagatc
tggaacatcatccaggagcacctctacatcgacatcttcgatggcatgccgcggagcaag
agccagatcgacagcatgtcgggaagtctggcgggggaggcgaagcgcgaggccaacaag
gcaaaggtgttctacgggctgctgaaggagcctgagatcgaggtgccccttgacgatgag
gacgaggaggcagaaaatgaagaaggcaagcccaagaagaagaaacctaagaaggacagc
atgggctcaaagagcaaaaaacaggacccaaacgccccccagccgaacagaatccctctc
ccagagctgaaggactccgacaagctagacaaaattatgaacatgaaggaggccacaaaa
aggattcgtttgggtcctgagacgctgccgtccatctgcttctactccttcctcaacgca
taccagggtttgacagccgtggacttcaccgacgactccagtctgattgcaggaggtttt
gcggactccacagtacgcgtgtggagtgtaacgcccaagaagctacgcggagtcaaatcg
gcagctgatctgagtctgatagataaagagtcggacgatgtgctggagaggataatggat
gaaaagacagctagcgagtccaagatcttgtatggacacagcggtcctgtgtacggcata
agcttcagccccgacaggaactacctgctgtcatgctcggaggacggcactgtcagactg
tggagtctgcagaccttcacgtgtctggttgggtacaaaggccacaattacccagtgtgg
gacactcagttttctccatatggatactatttcatatctgggggtcacgacagagtcgct
cggctttgggcaacagatcactatcagccgctgcgcatgtttgcgggccacctcgctgac
atcacctgcacccgcttccaccccaactccaattatgtggccaccggatcggcagaccgc
accattaggatgtgggacatcttgaacgggaactgcgtccgaatcttcacagggcacaag
gggccaattcattccctggccttctcgccgaacgggaagttcctggcgtccggagccaca
gacggcagggtgctgctgtgggacatcggtcacggcttgatgatcggagagctgaagggc
cacacggacacggtctacgccctgaagttcagcagagatggagaaatcctggcctcagct
tccatggataacacggtgcggctgtgggactcggtgaaagcgttcgatgacatcgagacg
gatgacttcaccgcagccacaggccacatccacctgcccgagaactcgcaggagctgctc
ctgggagcgtacatgaccaaatccacgcccgtcatccacctgcacttcacacgcagaaat
ctgctcttggcagcaggagcgtacaacccttag

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