Conger conger (European conger): 133121223 Help Entry 133121223         CDS       T10633                                  Symbol col1a1b Name (RefSeq) collagen, type I, alpha 1b   KO K06236   collagen type I alpha Organism ccog  Conger conger (European conger) Pathway ccog04510   Focal adhesion ccog04512   ECM-receptor interaction ccog04518   Integrin signaling ccog04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ccog00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     133121223 (col1a1b)    04518 Integrin signaling     133121223 (col1a1b)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     133121223 (col1a1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     133121223 (col1a1b)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccog00536]     133121223 (col1a1b) Glycosaminoglycan binding proteins [BR:ccog00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    133121223 (col1a1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd TILa Motif Other DBs NCBI-GeneID:  133121223 NCBI-ProteinID:  XP_061086408 LinkDB All DBs Position 2:42850913..42880829 Genome browser AA seq 1396 aa AA seqDB search MFSFVDIRLVLLLAATTLLARGQGEDDQSGGSCTLGGQLYNDKDVWKPEPCQICVCDSGT VMCDEVICEDTSDCPNPEIPFGECCPICPDNGPGPQGPQGDAGPKGDRGLPGPPGGDGIP GQPGQPGQPGPPGPPGLGGNFSPQMSYGYDEKSGGGGMALPGPMGPMGPRGPPGPPGLTG PQGFPGPAGEPGEPGASGPMGPRGPSGPPGKNGDDGEAGKPGRPGERGPSGPQGARGLPG ERGRPGSPGPAGARGNDGNAGASGPPGPTGPAGPPGFPGGAGPKGETGPAGGRGSEGPQG SRGEPGNPGPAGPAGPAGNPGSDGAAGAKGAPGAGGIAGAPGFPGARGTPGGPGPGGAPG PKGNNGDTGPHGAKGEPGTKGEAGPVGAQGGPGPSGEEGKRGARGETGGAGPRGPPGERG APGSRGFPGADGAAGPKGAPGERGASGAAGPQGATGEAGRPGEPGNPGSKGVTGSPGSPG PDGKTGPVGAPGQDGRPGPAGPAGSRGAPGVMGFPGSKGTAGDGGKPGERGTVGPAGPLG APGKDGDVGAPGAPGPAGPAGEKGEQGPAGAPGFQGLPGAQGATGETGKSGEQGPPGETG APGPAGSRGDRGFPGERGATGAVGPAGHRGSNGPAGNDGPKGEPGAGGAPGAQGAPGLQG MPGERGAGGMPGARGERGDAGAKGADGGPGKDGLRGMTGPIGLPGPPGGAGEKGEGGPVG PAGPTGGRGAPGERGEPGAPGPAGFAGPPGADGQPGAKGETGDSGPKGDAGAPGPSGPVG SAGPQGPAGATGPKGARGGAGPPGATGFPGASGRVGPPGPAGAGGPPGPTGPVGKEGQRG NRGETGIAGRSGEPGPIGPAGPPGEKGAAGSDGPAGTAGIPGPQGIAGQRGIVGMPGQRG ERGFSGLPGPSGEPGKQGSVGPSGERGPPGPMGPPGLSGAPGEAGREGSTGHDGAPGRDG AAGPKGDRGESGPAGAPGAPGPSGAPGPMGSSGKTGERGESGAAGQGGPAGPAGARGPGG PAGARGDKGEAGESGDRGMKGHRGFSGLQGLPGPSGTHGEQGPAGPAGAPGPRGPAGSAG AVGKDGMNGLPGPIGPPGPRGRAGEMGPAGAPGLPGPPGPPGAPGGGFDFGFISQPAQEK APDPYRSFRADDANVVRDRDMEVDTTLKTLSQKIENIRSPEGTQKNPARACRDLKMCHPE WKSGEYWIDPNQGSALDAIKVFCNMETGQTCVSPSQAEIPRKNWYTSKNPKEKKHIWFGE SMTEGFQFQYGSEGSDPEDVNIQLTFLRLMANEASQNITYHCKNSIAYMDQQTGNLKKAL LLQGSNEIEIRAEGNSRFTYTVSEDGCTSHTGAWGKTVIDYKTTKTSRLPVIDIAPMDVG ANNQEFGIEVGPVCFL NT seq 4191 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttagtgctgctgcttgcagcaacaacacttctggca agaggtcaaggcgaggacgatcaaagtggcggcagctgtacattgggcggccagttgtac aatgacaaagatgtgtggaaaccggaaccctgccagatctgcgtgtgcgacagcggcaca gtaatgtgcgatgaggtcatttgcgaggatacatctgattgccccaatccagaaatccct ttcggcgaatgctgcccaatctgccccgacaatggtccagggccacagggaccccaaggt gatgctggccccaagggtgacaggggtcttcccggtccccctggcggtgatggcatccct ggacagcctggacagcctggccagcctggccctcctggaccccctggcctcggtggaaac ttttctcctcagatgtcttacggctatgatgagaaatccggaggtggtggaatggcattg cccggccccatgggtcccatgggccctcgtggcccccctggcccccctggtctgactgga ccccaaggtttccctggccccgctggagagcctggcgagcccggcgcttctggtcccatg ggtccccgtggtccatctggcccccctggaaagaatggagatgatggtgaggccggaaag cctggacgcccaggtgagcgcggtccatctggccctcagggtgcccgtggtctccccggt gagagaggtcgccctggatcccctggacctgctggtgctcgtggtaacgatggaaacgct ggtgcctctggtccacctggtcccactggccccgctggcccccctggtttcccaggtggt gctggacctaagggagagactggacctgctggaggccgtggctctgagggaccccaagga tcccgtggtgagcccggtaaccccggaccagctggacctgccggccctgctggcaacccc ggatctgatggtgccgctggtgccaagggcgctcctggcgctggtggtattgctggtgct cctggattccctggtgcccgtggaacacctggaggccctggacccggtggcgctcctggc cccaagggtaacaatggagacaccggtccccatggagccaagggagagcctggtaccaag ggagaggctggtcccgtaggtgctcagggtggacctggcccatctggagaggaaggcaaa agaggtgcccgtggtgagactggtggtgctggacctcgtggaccccctggagagcgggga gcacctggtagccgtggattccctggtgctgatggagcagctggccccaagggtgcccct ggtgagcgtggtgcctcaggtgctgctggaccccagggtgccacaggtgaggctggccgc cccggcgagcctggcaaccccggatccaagggtgtgactggtagccctggtagccctggc cccgatggcaaaaccggccctgttggtgcccctggacaagatggccgccctggacctgca ggccccgctggatccagaggagctcctggagtcatgggtttccccggatccaagggaact gctggtgatggtggaaagcctggtgagagaggcactgtaggacccgctggtcctcttggt gcccctggcaaagacggtgatgttggtgcacctggtgcccctggcccagctggacctgct ggagagaaaggcgagcaggggcctgcgggtgctcctggattccagggtctgcccggagcc cagggtgctactggtgagactggcaagtctggcgagcagggtcctcctggtgagaccggt gcgcccggaccagctggatcaagaggcgacagaggtttcccaggagagcgtggtgccact ggtgcagttggccctgctggtcaccgtggttctaatggaccagctggtaacgatggtcct aagggtgagcctggtgctggtggagccccaggtgctcagggtgccccaggtcttcaggga atgcccggtgagcgaggtgcaggtggcatgccaggtgccaggggtgagagaggtgatgca ggtgccaagggtgctgatggtggccccggaaaggatggccttcgtggtatgactggtccc atcggtcttcctggcccccctggtggcgctggagagaagggtgagggtggtcccgttggc cctgctggtcctactggcggccgtggtgcccctggtgagcgtggtgagcctggtgcccct ggacctgctggattcgctggaccacctggtgctgatggccagcctggtgcaaagggagag actggtgattctggtcccaagggtgatgctggtgctcctggtccctccggccctgttgga tcagctggaccacagggtcccgctggtgcaactggacctaaaggtgctcgtggtggtgct ggaccccctggcgctactggtttccctggtgcttctggtagagttggaccccccggccct gctggtgctggcggcccccctggccccaccggacctgttggaaaggagggacagcgtggc aaccgtggtgagactggcattgctggtcgtagtggtgagcctggcccaattggccctgct ggacctcctggcgagaaaggagctgccggttctgatggtcctgctggtactgctggtatt cccggacctcagggtattgctggacagcgcggtatcgtgggtatgcctggacagaggggc gagcgtggtttctctggcctccccggcccatctggagagcccggtaagcaaggatctgtt ggcccctctggtgagcgtggaccccctggccccatgggaccccctggactgagtggtgct cccggtgaagctggccgtgagggttccactggtcatgatggtgctcctggtcgcgatgga gctgcaggccccaagggtgaccgtggtgagtccggccctgctggtgcacctggtgcccct ggaccttccggagctcctggtcccatgggttcatccggcaagactggagaacgtggagag tctggtgctgctggtcaaggtggtcctgctggtcccgctggtgcccgtggccccggcggt cccgctggagcacgtggtgacaagggtgaggcaggagagtctggcgatagaggtatgaag ggacacagaggtttcagcggacttcagggtcttcccggaccttctggcacccatggagag caaggacctgctggacctgctggtgcccctggaccaagaggacctgctggctcagccggt gctgttggtaaggatggcatgaatggtctgcctggccccatcggaccccctggaccccgt ggtcgtgctggtgaaatgggacctgctggtgctcctggccttcctggacctcctggcccc cctggtgctccaggtggtggattcgactttggcttcatttcccaacccgcccaggagaag gcccccgatccctaccgcagcttcagagccgatgacgctaacgtggtgcgtgaccgtgac atggaggtggacaccaccctcaagaccctgagccagaagatcgagaacatccgcagcccc gaggggacacagaagaaccccgcccgtgcctgccgtgacctgaagatgtgccaccctgag tggaagagcggcgagtactggattgaccccaaccagggctccgctctggatgccatcaag gtcttctgcaacatggagactggccagacctgcgtctctccaagccaggctgaaattccc aggaagaactggtacaccagcaagaaccccaaggagaagaagcacatctggtttggcgaa tcaatgaccgagggcttccagttccagtatggcagtgagggttctgatcctgaggatgtc aacatccagctgaccttcctgcgtctgatggccaacgaggcctcccagaacatcacgtac cactgcaagaacagcatcgcctacatggaccagcagactggcaacctcaagaaggccctg ctcctccaaggctccaacgaaatcgagatcagagccgagggcaacagccgcttcacatac accgtcagcgaggatggctgcacgtcacacactggcgcatggggcaagacggtcattgac tacaagacaacgaaaacatctcgtctgcccgttattgacatcgctcctatggatgttggt gcaaacaaccaggaatttggcattgaagttggccctgtctgcttcttgtaa

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