Conger conger (European conger): 133121601
Help
Entry
133121601 CDS
T10633
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccog Conger conger (European conger)
Pathway
ccog03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133121601 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccog03021
]
133121601 (taf5l)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133121601 (taf5l)
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133121601 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
133121601 (taf5l)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
133121601 (taf5l)
STAGA complex
133121601 (taf5l)
TFTC complex
133121601 (taf5l)
SAGA complex
133121601 (taf5l)
SLIK complex
133121601 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
TFIID_NTD2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_IP5PC_F
Nbas_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
133121601
NCBI-ProteinID:
XP_061086882
LinkDB
All DBs
Position
2:40669398..40693802
Genome browser
AA seq
601 aa
AA seq
DB search
MKRVRTEQIQYTVAQYLKRRQYVDTESSLKGAKLSQSAEEMAANLTVQAESGCANVVSAA
PCQADPQQYETQFAKLRNFLSEAEVPWSREVSSMLYPLFIYLHLDMARCGQKSAVDSFYS
RFHGLFLQDAEQKDTVEQLRHVLSAQDVLSNPKLCTFLDQKYVVHLTDPSYSYLLRYLQS
ADNGALCRVLSAHVQVEVTAVQRTDYQLYGPGTWGSSVSCGPASSRVVDPGDGLEPSDMA
PGLPLNEAAAEALQDCIKRVKDGPPSLTTVCFYAFHHTDQLLNAAEISADSKLLAAGFDN
SAVKLWSLRARKLKAEPHCVDISRIRLACDVLDEEADDVGSAGSEMKILRGHCGPVYRTT
FLTDSSGLLSCSEDTTIRYWNLGSFTNTVLYQGHAYPVWDVDISPCSLYFASGSHDRTAR
LWNFSRTYPLRLYTGHLADVDCIKFHPNSNYLATGSADKTVRLWSTQQGSSVRLFTGHRG
PVLSLAFSPNGKYVASAGEDQRLKLWDLASGSLFKDLRGHTDTITSLSFSPDSCLVASSS
MDNSVRVWDIRNSPGGSNPTDGSSSELVGLYTGSTSNVLSVQFMACNLLLVTGTAQEKQE
H
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggtgcggactgagcagatccagtatacagtggctcagtacctgaaaaggcgg
cagtatgtggacactgaaagttccctgaagggggccaaactttcccagtctgctgaggag
atggcggctaacctcacagttcaggcggagtctggctgtgccaacgtggtctctgcagct
ccctgtcaggcagacccacagcaatatgaaactcagtttgccaaactgcgcaactttctg
tccgaagcggaggtgccttggagccgggaggtgagcagcatgctgtaccccctgttcatc
tatctgcacctggacatggcgcgctgcgggcagaagagtgcggtggacagcttctacagc
cgcttccacgggctcttcctgcaggatgccgagcagaaggacacagtggagcagctgcgc
cacgtcctctccgcccaggatgtcttgtccaaccccaagctctgcaccttcctggaccag
aagtatgtggtgcacctgactgacccgtcctacagctacctcctgcgctaccttcagagt
gccgataacggcgccctctgccgggtgctgagcgcccacgtgcaggtggaggtgactgcc
gtccaacggactgactaccagctgtatgggccgggcacctggggctcctccgtgtcctgc
ggccctgcctcttccagggtcgtggatcccggagacggcctggagcccagcgacatggcg
ccgggcctcccgctgaacgaggcagcagccgaggcgctgcaggactgcatcaagcgggtg
aaggacggccccccctcgctcaccacagtctgcttctatgctttccaccacaccgaccaa
ctgctgaacgcggctgagatctcggccgacagcaagctgctggctgccggcttcgacaac
tccgctgtcaagctgtggagcctacgggcgcgcaagcttaaggcggagccacactgcgtg
gacatctcacgcatccgcctggcctgtgatgttttggatgaggaggctgacgatgtgggc
agtgctggtagtgagatgaagatcctgcggggacactgcggaccggtctatcgcaccacc
ttcttgacggacagctcgggtctcctctcctgctcagaggacaccactattcgctactgg
aacctgggcagcttcaccaacactgtgctctaccagggacatgcctacccagtgtgggac
gtggacatcagcccctgcagcctctacttcgccagcggatcccacgaccggacggcccgc
ctctggaacttcagtcgtacgtacccgctgcgactctatactggccacctggccgacgta
gactgcatcaaatttcaccccaactcaaactatctggcgactggctcagcggacaagacg
gtgcgactgtggagcacccagcagggcagctcggtgcgcctctttacaggccaccgaggt
cctgtcctgtctctagccttctccccaaatggaaaatacgtggcatcggctggcgaggac
caacggctgaagttgtgggacctggcctcagggtccctgttcaaggacctgcggggccac
acggataccatcaccagcttgtccttcagtcccgacagctgcctggtggcttcctcctcc
atggacaattcggtacgggtatgggacatccgcaactcccctgggggcagcaaccctact
gacggctcctccagcgagctggtgggcctgtacactggcagcaccagcaacgtccttagc
gttcagttcatggcatgtaacctgctcttggtgacgggcaccgcccaggagaaacaggaa
cattag
DBGET
integrated database retrieval system
