Conger conger (European conger): 133121666
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Entry
133121666 CDS
T10633
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ccog Conger conger (European conger)
Pathway
ccog03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133121666 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccog03021
]
133121666 (cpsf4)
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133121666 (cpsf4)
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133121666 (cpsf4)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133121666 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
133121666
NCBI-ProteinID:
XP_061087012
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All DBs
Position
2:complement(57855045..57860634)
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AA seq
274 aa
AA seq
DB search
MQDLIATVDRIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLRAACLKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICINYLVGFCPDGRTCKFMHPRFDLPMGATDQPP
LQQQIQTQQKLNFQPMNMRSTSSLIQLTNPKVNSNHYQNHPRMPQVIGPMHMHNNMTGHR
GPRPLEQVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacttgattgctacagtggatcgtattaaatttgacctggagatagcagttgag
cagcagttaggagcccagcctctgcctttcccaggaatggataaatcgggggcagctgtc
tgtgagtttttcctgagagctgcttgtttaaaaggtgggatgtgtcctttccgtcacata
agtggggagaaaacggtagtttgtaaacattggctcagaggactgtgcaagaaaggggac
cagtgtgagtttcttcatgaatatgacatgaccaagatgcctgagtgctatttctactcc
aaatttggggagtgcagtaacaaagaatgtccattcttacacattgaccctgagtcaaag
atcaaagattgtccttggtatgacagaggtttctgtaaacatggtccagattgcaggcac
aggcatactcgaagggttatctgtatcaactatttggttggcttttgtccagatggcagg
acttgtaaattcatgcatccacggtttgatcttcctatgggagcaactgaccaacctcct
cttcaacagcaaatacagacccagcaaaagcttaactttcaaccgatgaatatgaggtcg
acatcatcactgatccagttaactaaccctaaagttaactcaaaccattaccagaaccat
ccgaggatgccacaggtcattggtccaatgcacatgcacaacaacatgacaggtcataga
ggtccccgccctctggaacaggtcacctgttacaagtgtggtgagaagggacactacgcc
aacaaatgtacaaaaggacacctggcattcctaagcggacaataa
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