Conger conger (European conger): 133121675
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Entry
133121675 CDS
T10633
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133121675 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccog04812
]
133121675 (spast)
Enzymes [BR:
ccog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
133121675 (spast)
Membrane trafficking [BR:
ccog04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133121675 (spast)
Cytoskeleton proteins [BR:
ccog04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
133121675 (spast)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
Vps4_C
TIP49
MIT
AAA_16
AAA_14
Mg_chelatase
AAA_24
IstB_IS21
AAA_2
DUF815
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
133121675
NCBI-ProteinID:
XP_061087024
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All DBs
Position
2:4791045..4812150
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AA seq
586 aa
AA seq
DB search
MNSPGGRGRKKKGPACTSAAPEGDAPDQVSLHKRNLFYFSYPLLAVFALFRVIALYLGKL
FAWVCERLSRAMAVRAKRPEDVGGGEYEDTGELIRNHHKQAFEYISVALRIDEDEKGHKE
QAVQWYKKGISELEKGIAIEIMGQGEKSERAKRLQAKMTTNLIMAKDRLELLAQLSPASS
QRDIYTQSTKPCYQNGHLRSVSGAVPKKKDPLTHSSHSLPRAKHSHKSPWAGQRSPSYTG
TPASTARPPSQTAGGNKGSAKPGARQNGKPTTPTGTPLKKRDMKNLKNVDSKLANLILNE
IVDSGSAVRFDDVAGQDLAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTML
AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERR
EGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFAKRVYVALPTE
ETRYKLLRNLLEKHGNPLGQRDLAKLARMTEGYSGSDLTSLAKDAALGPIRELKPEQVKK
MTANEMRNIKFCDFEESLKKIKRSVSPQTLELYARWNRQYGDTTAV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggacgaggcagaaagaagaagggccccgcctgcaccagcgccgca
ccggaaggcgacgcccccgatcaggtgtcgctccataagcggaatttgttctatttttcc
tacccactgctggcggtgtttgcgctgttccgggtgatcgccctgtacttgggcaaactg
ttcgcctgggtttgcgagcggctctccagggccatggcggtgcgagccaagcgcccggag
gacgtcggcggcggggaatacgaggacaccggcgagctgatccgcaaccaccacaagcag
gccttcgaatacatctcagtagcgctgaggattgacgaggatgaaaaaggtcacaaagag
caggcggtgcagtggtacaagaaagggatctctgaactggagaagggaattgccatagag
atcatgggtcaaggggagaagtctgaacgcgccaaacgtctgcaggccaagatgaccacc
aacctgatcatggccaaggatcgcttggagcttttggctcagctttccccggcctcatct
cagagagacatctacacccagagcacaaagccgtgctaccaaaacggccacctgcgctca
gtgagcggggcggtgcccaaaaagaaggaccctctgacccactccagccactccctcccg
cgggccaagcactcccacaagagcccctgggccggccagcggtcccccagctacaccggg
acccccgcctccaccgccagacccccctcccaaaccgccggaggcaacaagggctccgcg
aaaccgggcgcccggcagaacggcaagcccacgacgcccacgggcacgcccctgaagaag
agggacatgaagaacctgaaaaacgtggacagcaagctggccaacctcatcctgaacgag
atcgtggacagtggctcggccgtgcggtttgatgacgtggcgggacaggaccttgccaag
caggcgctccaggagatcgtcatcctcccggccctgagaccagagttgtttacaggcctg
agggcccctgcaaggggcctcctgctgttcgggcccccagggaatgggaagaccatgctg
gccaaggcggttgccgcggaatcaaacgcgacctttttcaacatcagcgccgccagcctg
acctctaaatacgtgggggaaggggagaagctggtcagagctctgtttgccgtggccaga
gaactacagccctccatcatattcatcgacgagatcgacagcctcctctgcgagaggagg
gagggcgaacacgacgccagcagacgtctgaagaccgagttcttaatcgagtttgacggg
gtccaatcaggaggggacgaaagggtgctggtgatgggagccaccaatcggccgcaggag
ctggacgaggccgtgctgaggcggttcgcaaagagagtgtatgtggctttaccaacagaa
gagacacgatacaagctgctgagaaacctcctggagaagcacggaaaccccctgggtcag
agagacctggctaaactcgcccgtatgactgagggatactcaggaagtgacctgacctca
ttggctaaagatgctgctcttggaccaatcagagagctgaaaccggagcaggtgaagaaa
atgactgctaatgagatgcggaacataaagttctgcgatttcgaggagtctctgaagaag
atcaagcgcagcgtgagcccccagaccctggagctgtacgcacgctggaacagacagtac
ggggacaccaccgccgtgtga
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