Conger conger (European conger): 133122280
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Entry
133122280 CDS
T10633
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03020
RNA polymerase
ccog04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133122280 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
133122280 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccog03021
]
133122280 (polr3a)
Enzymes [BR:
ccog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133122280 (polr3a)
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
133122280 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Bac_DNA_binding
DUF3654
Motif
Other DBs
NCBI-GeneID:
133122280
NCBI-ProteinID:
XP_061088165
LinkDB
All DBs
Position
2:12168952..12192213
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTRHTPLPYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSHIMLTKE
EKQQFLDVLKRPNLAYLQKRGLKKKISDKCRKKTICLNCSTFNGPVKKCGLLKIIHEKYK
TTKKVVDAVVSEFLQSFDIAIEHNKEVESLLTRAQENLNPLVVLNLFKRIPSEDVPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRVSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANMDMLRKLVRNGPDVHPGANF
IQQRHMQMKRFLKYGNREKMAQELKYGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIVASILVGKDEKIKVALPAPAILKPVTLWTGKQI
FSLILKPSKDCPVKANLRTKGKQYCGRGEDLCYNDSFVVIQNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQMEAANAMSRLARLAPVFLSNRGFSIGIGDVTPGQGLLKAKQDLLDAG
YKKCDEYIEALNSGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLTELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCSDQPALSRNELVLTAESIMKRSDFTC
CRDSFLEALTETGSEKYFEEIRKFIKNVSEKIKKTRDKYGINDNGTTEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIISAHLDIVDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYV
LQTLKEDLPKIVVQGIPEVSRAVIHIDEQSGKQKYKLLVEGDNMRAVMATHGINGSKTTS
NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPTPPRRPLLFDNSEFHISLIT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcaatttagagaaacagatgtggcaaaaaagattagccacatctgtttc
gggatgaaatccgccgaacagatgcgtcagcaagctcacatccaagtggtcagtaaaaac
ctgtacagccaggacacccggcataccccgctgccttacggagtgctggatcatcgtatg
ggcactagtgagaaagatcggccttgtgaaacttgtgggaagaatctggcggactgccta
ggacattatggatatctggacctggagctgccctgttttcatgtggggtattttaaggcg
atcattgggatcttgcagatgatctgcaaaacgtgttcccatatcatgctcaccaaagag
gagaaacaacagttcctggatgttttgaagaggcccaatctggcctacttacagaaacgt
ggcctgaaaaagaagatttctgataaatgccgcaagaaaacaatctgcttgaactgctca
accttcaatggtccggtgaaaaaatgtgggttactgaagattatccacgagaaatacaag
acaaccaagaaagtagtggatgctgttgtgtcagaattcctccaatcatttgatattgcg
atagaacacaataaagaagtggaatccttactgacaagggcgcaggagaacctgaaccct
ctggtggtgctgaacctgttcaagaggatcccatcggaggacgtgcccctgctgctcatg
aacccagaggcagggaaacctgcggacctgatcctgacccggctgctggttccccctctc
tgcatccgcccctctgtcgtcagcgacctcaagtccggcaccaacgaggacgacctcacc
atgaagctcaccgagatcatcttcctcaatgatgtcatcaaaaagcaccgcgtgtctgga
gccaagacgcagatgatcatggaggactgggacttcctccagctccagtgcgccctctac
atcaacagcgagctgtcgggcatcccgctcaacatggctcccaagaagtggaccagaggc
ttcgtgcaaagactcaaagggaaacaagggcgattccgaggaaacctttctggaaagcga
gtggatttctctggcagaacggtaatctctcctgaccctaacctgcgcattgacgaggtc
gctgtgccggtccacgtggctaaaatcctgacttacccagagaaggtgaacaaggccaac
atggacatgttgaggaagctggtgcggaacgggccagatgtgcatccaggagccaacttc
atccagcagcgccacatgcagatgaagaggtttctgaagtatggcaaccgagagaagatg
gctcaagagctgaaatacggagacgtggtggagcgacacatgatcgacggcgacatcgtt
ctcttcaaccgccagccgtccctgcacaagctcagtattatggcccacattgccagagtg
aagcctcacagaaccttccgcttcaacgagtgcgtgtgcacgccgtacaacgctgacttt
gacggggacgagatgaacctgcacctcccgcagacggaggaggccaaggccgaggccctg
gttctgatggggactaaagcaaatttagtcacccccagaaatggagagcctctgattgca
gcgattcaggacttcttgacaggggcctaccttctgactttgaaagatactttctttgac
agagcaaaagcctgtcagattgttgcctctattcttgttggaaaagatgaaaagatcaaa
gttgcactccctgctccggcaatcttgaagcccgtaactctatggacaggtaagcagatc
ttcagcctcattctgaagcccagcaaggactgtcctgtcaaagccaacctgcgcacgaag
ggcaagcagtactgcgggagaggagaggacctctgctacaacgactccttcgtggtgatt
cagaacagcgagctgatgtgtggcagcatggacaagggaaccctggggtccggctccaag
aacaacatcttctacatcctcctgcgggactggggtcagatggaggcggccaacgccatg
tcgcgcctggcccggttggctcccgtgttcctgtccaaccgagggttttcgattgggatc
ggggacgtgaccccaggccagggcctgctgaaggccaagcaggacctcctggatgcaggg
tacaaaaagtgcgatgagtacatcgaggcactgaactccggcaaactgcagcaacagcca
ggatgcaccgctgaggagaccctggaggctctgattctgaaggagctgtcggtgatcaga
gaccacgcgggcagcgcctgcctgactgagctggacaaaagcaacagtcctctcatcatg
gccctgtgtggctccaaagggtccttcattaacatctcccagatgattgcctgtgtcggt
cagcaggccatcagcgggtcccgggtccccgatggctttgagaaccgctcgctgccgcac
tttgaaaagcattcgaaacttcccgcagcgaagggttttgtagcagacagcttctactct
gggctgacacccaccgagttcttctttcacaccatggctgggcgagagggcttggtggac
actgctgtcaaaacggctgaaactgggtacatgcagagacgtctggtgaagtccttggaa
gacttgtgttctcagtatgacctcactgtgcgaagctccactggtgacatcatccagttc
atatacggaggagatggcctggatccggcagcgatggagggcaaggatgaaccactagag
ttcaagagggttctggataacatcagagctgtgtatacgtgttcagaccagccggctctg
agcaggaacgaactggtgctgacggctgagtctattatgaagaggagtgatttcacctgc
tgcagagacagcttcctggaggcattaactgaaacaggctctgaaaagtattttgaggaa
atcaggaaattcatcaagaatgtttcagaaaagatcaagaagaccagggacaaatatggc
atcaatgacaatggtaccactgagcctaaagtgctttaccagctggacaggatcacacca
acacaactggagaagtttctggagacatgcagggacaaatatatgagggcccagatggag
cctggctccgccgtcggggccctatgcgcccagagcatcggggagcccggcacacagatg
accctgaaaaccttccactttgctggggtcgcctccatgaacatcaccctgggggttccc
cgaatcaaggagataatcaatgcctctaaaaatatcagcacccccataatcagcgcgcat
ttggatattgtggatgatgcagactttgcccgcctggtgaaggggaggattgagaagacc
cttcttggagagatttcagagtacattgaggaagtgttccttcccgacgactgcttcatc
ctcgtcaagctgtcactggagagaatccgcctccttcgcctggaggtcaatgccgagacg
gtgaggtactccatctgcatgtcaaagctgagggtgaagccaggagacatcgctgtccac
ggagaggctgtggtgtgcgtctccccgcgggagaacagcaagagctccatgtactacgtc
ctgcagactctcaaagaagatcttcccaagattgtggtccaaggaatacctgaagtgtcc
agggctgtcattcacattgatgagcagagcggcaaacagaagtacaagcttttagtagaa
ggcgacaatatgcgagccgtcatggccacccatggcattaatggcagtaaaaccacctct
aacaacacatatgaggttgagaagacccttggcattgaagctgcaaggtcaaccataatc
aacgagattcagtacacgatggtgaaccacgggatgagcatcgatcggagacatgtcatg
cttctggcagatctaatgtcctataagggtgagatcttgggcatcactagattcggcctg
gccaaaatgaaggaaagcgtcttgatgctggcctcctttgaaaagactgccgatcatctc
tttgatgctgcgtactttggacagaaagactctgtctgcggtgtatccgaatgcatcatc
atggggattccaatgaacattggaacaggacttttcaagctgttgcacaaggcagacaag
gacccaacaccacccagaaggcccctgctctttgataacagtgaattccacatatcgcta
atcacatag
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integrated database retrieval system
