Conger conger (European conger): 133122718
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Entry
133122718 CDS
T10633
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
ccog Conger conger (European conger)
Pathway
ccog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133122718 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccog03400
]
133122718 (msh2)
DNA repair and recombination proteins [BR:
ccog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
133122718 (msh2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
133122718
NCBI-ProteinID:
XP_061088827
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Position
2:complement(24085827..24111563)
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AA seq
932 aa
AA seq
DB search
MAVQPKQNLSMDSASEHGFLNLYFSMPEKPDTTVRLFDRNEYYTVHGKDALFAAKEVFKT
NGVIKNLGSGSRKLESVVLSKMNFESFVRDLLLVRQYRVGSYKNKGSSKEHDWQLTYKAS
PGNLTQFEEILFGGAGGSGAVAAGVVGVRLGSGDGQRVVGVGYVDSTLRKLGVCEFPDND
QFSNLEALLVQIGPKECVLPGGDSAGDMGKLRQVVQRGGILLSDRKKVEFNNKDMVQDLN
RLLRARKGETVSSAALPEMEKQVAMSSLAAVIKYLELLSDEANFGSFQLTTFDLSQYMRL
DNAAVQALNLFQGSPDDTTGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDRNKIEERLDL
VESFVDDAELRQSCHEDLLRRFPDLNRLAKKFQRQNSTLQDCYRVYQAVGQLPGLVQALE
RHSGNHLVLLNAVFSSPLKDLGTDFAKYQEMIETTLDMNQIEHHEFLVKPSFDPTLSELR
ETMDHLEKSMQGALSAAARELGLEAGKTVKLESNAQLGYFLRVTCKEEKSLRNNKKFTTL
DVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEILSIASGYVEPLQTLNDVIAQL
DVVVSLALVSHSAPVPYVRPRVLEKGSGRLRLKGARHPCIEAQDDVAFIPNDVSFTRGEE
MFHIITGPNMGGKSTYIRQVGVIVLMAQMGCFVPCEEAEISVADSVLARVGAGDSQMKGV
STFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEFIATRIKCFCLFAT
HFHELTALAQHNPTVSNLHVTALTTDSTLTMLYRVKKGVCDQSFGIHVAELASFPKHVIA
SAREKALELEEFQEVTRAGEEGEEGPEAKRRRLDKQEGEKIIEGFLAKVKALPAADMSDQ
AIQEELRKLKAEVLARNNSFVSELVSRSTSSI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaaccaaagcagaacctgtctatggacagcgcatcagaacatggatttctg
aatttgtatttctctatgcccgaaaaacccgacaccactgtgcggctattcgatcgcaat
gaatactatacagtccacgggaaagatgcactttttgcagcgaaagaagttttcaaaact
aacggagtcattaaaaatctcggttcagggagcaggaagctggagagcgtggttctcagt
aagatgaactttgagtcgttcgtgcgggacctgctactagtgcggcagtacagagtggga
agttacaagaacaaaggctccagtaaggagcatgattggcagttgacgtacaaggcctct
cctggtaatctcacccagtttgaggagatcctgttcggaggtgctggggggtctggggca
gtggcagcgggcgtggtcggggtgcgtctgggttcaggtgacggacagcgcgtggtgggc
gttggctatgtcgactccaccctgcggaagctgggcgtgtgcgagtttcctgacaatgac
cagttctccaacctggaggctctgctggtgcagatcggccccaaggagtgtgttctgcca
gggggagacagtgccggggacatgggcaagctccggcaggtggtgcagcgtgggggcatt
ctcctgtcagacaggaagaaggtggaattcaacaacaaggatatggtgcaggacctcaac
cgcctgctgagggccaggaagggggagacggtgtccagcgctgccctgcctgagatggag
aagcaggttgccatgtcttccctggcggcagtcatcaagtacctggagctgctctccgat
gaagctaacttcggctccttccagctgacgaccttcgacctcagccagtacatgcgtctg
gacaacgcggctgtccaggccctcaacctcttccagggttcccctgatgacacgacaggg
gcgcactcccttgccggcctgctgaataagtgcaggaccccgcagggccagcggctggtc
aatcagtggatcaaacagcccctgatggaccgcaacaagatcgaggagaggttggacctg
gtggagagctttgtggatgacgcggagctgaggcagagctgccatgaagacctgctccgg
cgttttccggacctcaaccgcctggccaagaagttccagcgacagaactccactctgcag
gactgctaccgggtctaccaggccgtgggccagctgcccggcctggtgcaggctctggaa
agacacagcggaaaccacctggtcctgctgaatgcagtgttcagctcccctctcaaagac
cttggcaccgactttgccaagtaccaggagatgattgagaccacactggatatgaatcag
atcgagcaccacgagttcctggtgaagccatcgttcgaccccaccctgagcgaactgcgt
gagaccatggaccacctggaaaagagcatgcagggggccctgagcgctgctgccagagag
ctgggcctggaggcggggaagactgtgaagctggagtcaaacgcccagctggggtacttc
ctcagagtcacctgcaaggaggagaagagcctgcgcaacaacaagaagttcaccacgctg
gacgtgcagaagaacggagtccgcttcaccaacagcaagctgagctcactgaatgaggag
tacaccaagagcagggaagagtacgaggaggcccagaacgccatcgtcaaggagatcctc
agcatcgcttccggctacgtggagcccttgcagactctgaacgatgtgatcgcccagctg
gatgtggtggtgagcctggccctggtgtcccactctgcccccgtgccgtacgtgcgtccc
agggtcctagagaaggggtccgggagactgcggctgaaaggagccaggcacccctgcatc
gaggcccaggacgacgtggccttcatccccaacgacgtgtccttcacccgaggagaggaa
atgttccacatcatcaccggccccaacatgggcggtaagtccacctacatccggcaggtg
ggggtgatcgtgctgatggcccagatgggctgcttcgtgccctgcgaggaggccgagatc
agcgtggccgactcggtgctggctcgcgtgggcgccggcgacagccagatgaagggcgtg
tccacgttcatggcggagatgctggagactgccgccatcctccgctcggccaccgaagac
tccctcatcatcatcgacgagttggggcgcggcacctccacgtacgacgggttcggcctg
gcgtgggcgatctccgagttcatcgccactcgcatcaagtgcttctgtctgttcgccacc
cacttccacgagctgaccgccctggcacagcataaccccaccgtcagcaacctccacgtc
accgcgctgaccaccgacagcactttgaccatgctctacagggttaagaaaggtgtgtgc
gaccagagtttcgggattcacgtggcggaactggcaagcttcccgaagcacgtgatagcc
agcgcacgggagaaagccctggagctggaggagttccaggaagtgacccgggcgggcgag
gaaggagaggaagggcccgaggccaagaggcgccgtttagacaaacaggagggggaaaag
ataattgaaggtttcctggccaaggtgaaggccctgcctgctgcagacatgtctgaccag
gccatccaggaggagctcagaaaactgaaggcagaggttctggcccggaacaacagcttt
gtgagcgagcttgtgtcccggtccacaagcagcatttaa
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