Conger conger (European conger): 133123180
Help
Entry
133123180 CDS
T10633
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04382
Cornified envelope formation
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04518
Integrin signaling
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133123180 (col4a2)
04518 Integrin signaling
133123180 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133123180 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133123180 (col4a2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133123180 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133123180 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133123180 (col4a2)
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133123180 (col4a2)
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133123180 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133123180
NCBI-ProteinID:
XP_061089486
LinkDB
All DBs
Position
3:complement(63173163..63241529)
Genome browser
AA seq
1685 aa
AA seq
DB search
MKSEVRMDGAMQVRRRIELQRLRFSLNTLTTLCLIIFVLLTSEVQAGGKKHDQPCGGRDC
SGGCKCFPEKGARGQPGPLGPQGGQGPPGRPGDYGVIGPKGEKGDRGRGGVTGPKGSVGM
TGVPGFSGMDGIPGHPGQAGSRGKPGADGCNGTRGDNGAQGTLGIHGPPGYPGGPGRKGE
KGDNLEISVFMERFRGDPGDRGYPGYAGPAGVPGPAGPQGRVGPQGPPGFPGPPGPKGTM
TKTLKGQKGELGDAGEPGPPGNSTYPHTSSPPGLPGFKGEKGLSGERGDLADNWVVGEVG
VMGYPGQRGSPGLDGRPGGKGDDGEPGQSGRDGAKGARGEPGVFTFPFGPITAGPRGPIG
EPGPQGERGEPGQKGLSGIPGTPATPSFDLALKVGPFGPKGFKGTKGPDGDSGIPATVPG
HPGYDGYPGAPGSPGEKGSWGNEFRGEDGESGQPGSAGQQGQKGDEGLCQCNNVHSPPGP
PGPQGSLGDQGMSGEWGQQGDPGSPGPHGISGPPGLPGQAGLPGQRGRKGEPMVATQKGS
PGDPGDPGAAGDQGESGLPGPLGYPGAPGQRGQPGDGPLGPPGERGRPGRPGAPGSAGLM
GEPGQVLGGKGLPGLPGEAGFDGFAGSPGSPGVPGGCVLEGDGRQEDGTGECDPVPGPAG
KPGLPGPVGLDGPQGEPGRKGSLGWFGEEGLKGEQGDPGRGGLPGQPGYVGLRGDGGLPG
YKGKQGSPGIPGRWGQDGELGQKGAHGEVVGASTGPPGQPGPPGLRGTKGINGDPGQPGY
EGVLGMPGILGSKGELGPQGLQGQEGRPGLPGKYGFPGLPGQAGPPGPPGVIGKPGPAGY
RGEDGDPGPPGPYGMKGSPGGPGSFGAKGNEGQQGTPGLPGQPGNPGLLGVKGSRGSIGM
SGFEGMPGNKGTVGFAGQKGEQGFPGTLGYKGTIGHKGVKGERGLKGPPGTKPEIPRYMI
IEMKGIKGDHGKAGGHGFTGPRGSKGFPGLPGVTGTDGMPGDPNDVKGTKGYFGAEGLPG
LKGMPGTPGELGIQGFPGMTGHRGQKGTPGAYGRSGEDGVQGRKGEDGPIISLPGPTGER
GDPGFPGHHGIKGFGGLQGEKGSAGFNGINGVKGEKGWPGVDGPAGSNGKTGSPGHHGQK
GWPGTPGDPGFGGHPGLPGERGFPGLKGIFGLDGLKGQKGIPGVPGLDDWGLSGDPGSKG
VKGEPGIPNTETGLPGLFGSKGSQGDPGAEGYPGAPGFQGPPGPHGISDIPGTQGDPGFP
GAKGLKGFPGGQGSPGASSPSGVKGDRGLPGLFGQRGSIGIQGDKGPQGTPGRNGVSGKK
GSKGEQGLMGTPGRPGFKGDRGPVGPKGNTGFPGFPGLIGDQGPVPTPPKQLGERGPPGA
HGIRGPDGRRGEIGPLGPPGDPGFTGPQGQKGMPGISGTTGTPGYRGDGGQVGYPGLQGL
QGSPGRPGVPGIAGMPGRSVSVGYLLVKHSQSDQTPMCPVGMAKLWEGYSLLYFEGQEKA
HNQDLGLAGSCLPRFNTMPFLYCNPGDICYYASRNDKSYWLSTTAPIPMMPVEEMEIKPY
ISRCSVCEAPSVAIAVHSQDATIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSC
LEDFRTTPFIECNGAKGTCHYFANKESFWLTSVESSFHGSPSAETLKAGQQLSRISRCQV
CMKNL
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgaagtacgaatggacggggccatgcaggttcgacgcaggatagaacttcaa
cgtttaaggttttcgcttaacacgctgacaactctgtgtctaataatcttcgttcttctg
acgtccgaagtacaagccggaggaaagaagcatgaccagccgtgcgggggaagggactgc
agcggaggctgcaaatgcttccctgagaaaggagctcggggccagccagggcccctagga
ccacaggggggccaagggcccccaggacgaccgggagactatggtgtgattgggcccaaa
ggagagaagggggaccgagggcgtggcggcgttactgggcccaaaggatccgtgggaatg
accggagttcctgggttctctgggatggacgggattcctggtcaccctggacaggcaggg
tctcgggggaaaccaggcgctgatgggtgcaatggaacacgaggagacaacggagcacag
gggacactcggcatccatggtcccccaggttatcctggtggtcctggcagaaagggtgag
aaaggcgacaatctggagattagcgtgttcatggagagatttcggggagatccgggtgat
cgcggctatcctggatatgcaggccctgctggtgtccccggtccagcgggtccccagggc
cgtgttggacctcagggcccacctggatttccaggccctcctgggccaaagggaacaatg
accaaaacgcttaaggggcagaaaggtgaactgggtgatgctggggagccgggccccccc
gggaactctacctacccccacacctcttcacctccaggactaccgggttttaaaggggaa
aagggtctcagtggtgaaaggggagatttggctgacaactgggtggtcggagaagtcggt
gtgatgggctacccagggcaaaggggaagccctggtttggatgggcgcccgggcgggaag
ggagatgatggggaaccggggcaaagtggaagagacggagccaagggtgcaagaggagag
ccaggagtattcacttttccatttggtccaattacagcagggccccgtggtcctatcgga
gagcccggcccccaaggggagaggggggaacctgggcagaagggactctctggaatccca
ggaactcctgccactccttcctttgaccttgcattgaaagtgggcccatttggcccaaag
gggttcaaagggaccaagggtcctgatggtgactcagggatacctgccactgtgcctggt
caccctggttacgacggatatcctggagctcctggaagccctggggagaaaggctcatgg
ggaaatgagttcagaggtgaggatggtgaaagcgggcagccaggttctgccgggcagcag
ggccagaaaggtgatgaaggcctgtgccagtgcaacaatgtgcactctccacctggccct
cctgggcctcaaggtagcctgggagaccaaggcatgtcaggcgagtggggccagcagggt
gacccaggcagtcctggcccacacgggatctctggaccacctggtcttccgggccaggcg
ggtctaccaggtcagagggggaggaaaggcgaaccgatggtagccacgcagaaaggatca
cctggagatccaggggaccctggtgcagcaggagaccagggggaaagtggtctaccaggg
ccactaggatatcctggagcccctggacaacgtggtcaaccgggagatggaccgttggga
cctccaggagaaaggggtcgtcctggccgccccggtgcacctgggagtgctggactgatg
ggcgaaccgggccaggtcctgggaggaaaggggcttccaggactcccgggtgaagctggc
ttcgacggttttgctggaagccctggatccccaggtgttccaggaggctgtgttctggaa
ggagacgggagacaagaggatggaacaggagagtgtgatccagtgccggggcctgccggt
aaacctggcttacctggccctgttggtttggacggtccacaaggtgagcctggacgcaaa
ggttcgcttggatggttcggggaggaggggctgaaaggggaacagggtgatccaggcaga
ggtggattaccggggcaaccagggtatgtggggcttcgtggagatgggggtctgcccggc
tacaaggggaagcaggggtctcctggtatcccaggaaggtggggccaggatggagaactg
ggacagaaaggtgctcacggggaggttgtgggggcctccactgggccccccggacagcca
ggacctcctggcctacgagggactaaaggcatcaatggagatcctggtcagcctggatat
gaaggggtgctaggcatgccaggaatacttgggtccaaaggagaactgggtcctcaaggc
ctgcaagggcaggaagggaggccgggacttccgggaaagtatggcttcccaggtttgcca
ggacaggcaggccccccaggccctccaggagtcattggaaaaccaggccccgctggttac
agaggagaggacggtgaccccggccctcctggcccttatggaatgaaggggtctcctggt
ggaccaggtagctttggtgcaaaggggaacgaggggcagcaaggcaccccagggttacct
ggacagcctggcaaccctggtcttcttggagtgaaaggttccagaggctcaatagggatg
tcagggttcgaaggcatgccaggcaacaagggcacagtgggattcgcaggacagaaagga
gaacaggggtttcctgggaccttgggatacaaaggtaccatcggacacaagggagtaaag
ggtgaaagagggttgaagggacccccaggtacaaagccagaaattccccgatacatgatc
atcgagatgaaggggatcaagggagaccacgggaaagcaggaggtcacggcttcacaggt
cccagggggtctaagggattcccaggcctgccaggagtgacaggcactgacggtatgcca
ggagatccaaatgatgtgaagggtaccaagggatactttggggcagaagggcttccagga
ctcaagggaatgcctggtacccctggagaactgggaatccagggcttcccgggaatgaca
ggacacaggggacagaaaggaactcctggagcctatggtcgctcgggggaggacggtgtg
cagggacgcaaaggtgaagacggccccatcatcagcttacctggacccacaggtgaaaga
ggggaccccggctttcctggacatcatgggattaagggcttcggtgggctgcaaggagaa
aagggcagtgcaggcttcaatggcatcaatggtgtcaaaggagaaaagggctggcctggt
gttgatggcccggcagggtctaatgggaaaacaggttccccaggacaccacggtcagaag
gggtggcctgggaccccaggagacccagggtttgggggccatcctggcctcccaggggag
agaggttttcctggtctgaaaggcatatttggtctggatggtctgaaggggcagaaaggc
attcctggagtcccaggtttggatgactggggactgtcaggagaccctgggtccaaagga
gtgaaaggagaaccagggatccccaacacagagacaggattaccagggttgtttggctcc
aagggatcacagggagacccaggtgctgaaggctatcccggagcccccggatttcagggg
cccccagggccacacgggatatctgacataccaggcacacagggtgaccccggcttccca
ggggcaaaagggctgaaaggtttcccggggggtcaagggtcaccaggtgcatcctctccc
agtggagtcaagggggatagaggtctgccaggactctttgggcagaggggctcaataggc
atccaaggagataagggaccgcaaggaaccccaggacggaacggagtgtctgggaagaaa
ggttcaaagggagagcaggggctgatgggaactcctggcaggcctggtttcaaaggagac
agaggacctgtcggtccaaaaggcaacactggattcccagggttccctgggctgattggt
gatcagggcccagtacccaccccacccaaacagcttggagagaggggccctcccggtgct
catggaatccgaggacccgatggacgccgtggggagattggccccctggggccgcctggg
gacccaggcttcacgggtccccagggtcagaagggcatgccaggaattagcggcacaact
gggactccaggttaccgtggagatggcgggcaggttggatacccaggtctccagggcctt
caagggagtccgggccgccctggggtccctgggatcgctggaatgccggggcgcagcgtg
agcgtggggtacctgctggtgaagcacagccagtcggaccaaacacccatgtgtcccgtg
ggcatggccaagctgtgggagggctacagtctgctgtactttgaggggcaggagaaggct
cacaatcaggacctgggcttagctggttcttgtctccctcgtttcaatactatgcccttc
ctctactgcaaccccggcgacatttgctactatgccagccgcaacgacaaatcctattgg
ctgtccaccactgcccccattcccatgatgccagtggaggagatggagatcaaaccctac
atcagccgttgctctgtgtgcgaggcgccgtccgtggccattgcagtgcacagccaggac
gctacaatcccacaatgccctgcaggctggcgtagcttgtggattggctactccttcctc
atgcacacggctgctggagacgagggaggcgggcagtctctggtgtcgccgggctcctgc
ctggaggacttccgcaccacgcccttcatcgagtgcaatggggccaagggcacctgccac
tactttgccaacaaggagagcttctggctcacctccgtcgagagctccttccacggttcg
ccttccgccgagacgctcaaagccggccagcagctgtctcgaatcagccgctgccaagtg
tgcatgaagaacctgtga
DBGET
integrated database retrieval system
