Conger conger (European conger): 133123338
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Entry
133123338 CDS
T10633
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
ccog Conger conger (European conger)
Pathway
ccog03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133123338 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccog03041
]
133123338 (sf3b1)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133123338 (sf3b1)
Spliceosome [BR:
ccog03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
133123338 (sf3b1)
Complex B
133123338 (sf3b1)
Complex C
U2 SnRNP specific factors
133123338 (sf3b1)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
133123338 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_ECM29
HEAT_EF3_N
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
133123338
NCBI-ProteinID:
XP_061089710
LinkDB
All DBs
Position
3:80227402..80253340
Genome browser
AA seq
1323 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKAALLEEGEQGVGLDSTGYYDQEIYGGSDSRFAGYVTSI
AANEQEDDDEEDSSTSLLGQKKAGYHGPVAMLNAVPQSDEQYDPFAEHRPPKIAEREDEY
KGRRRHLIISPERLDPFADGGKTPDPKQPARTYMDVMREQHLTKEEKEIRQQLAEKAKAG
ELKAVNGAAASQAAAAAAAKRKRRWDQTADQTPTNTTASSTPKKVSSWDQADANAETPGH
TPGHTPSNSRWDETPGRAKGSETPGATPSTRMWEPTPSHTPAGAATPGRGDTPGHATPGH
GGATSSVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDET
PASQMGSSTPLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTD
EELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPIGGMTGFHMQTEDRTMKTVNDQPS
GNLPFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITD
KAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPL
LIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGI
PSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKV
RTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEY
ANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQH
RMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGA
ADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLN
NKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIV
NVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFE
LLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAE
TCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRD
LVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAI
GPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPHVYNDEKNPFIRYELE
YFL
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacacacgaagacatcgaggctcagatcctggagatccagggg
atgaaggcggccctgctggaggagggggagcagggtgtcgggctggactccacggggtac
tacgaccaggagatctacggtggcagcgacagccgcttcgccggatacgtcacatccatc
gccgccaatgagcaggaggatgacgacgaggaggactcctccaccagtctgctgggccag
aagaaggcggggtatcacggtccggtggcgatgctcaatgccgttccacagtcagatgaa
cagtacgacccgttcgctgagcaccggccgccgaagatcgccgaacgggaggacgagtac
aagggccggcggcggcacctgatcatctcccccgagcggctcgaccctttcgcagacggg
ggcaaaaccccggaccccaagcagccggcccggacctacatggatgtgatgagggagcag
cacctcaccaaagaggagaaagagatccggcagcagctggcggagaaggcgaaggcgggg
gagctgaaggctgtgaacggagcggctgcctcccaggctgcggccgccgcggccgccaaa
cgcaagcgccgctgggaccagaccgccgaccagacccccaccaacaccaccgccagctcc
acgcccaagaaggtctccagctgggaccaggccgacgccaacgcagagactccaggccac
accccgggccacaccccctccaacagtcgctgggacgagacgcccgggcgggcgaagggc
agcgagacgccgggagccacgcccagcacgcgcatgtgggagcccacacccagccacacc
cccgcgggggccgccaccccggggcggggggacacgcccgggcacgccacgcccggccac
ggcggggccacctccagcgtccgcaagaaccgctgggacgagacgccgaagaccgagaga
gagacccccgggcacggcagcggctgggccgagactccccgcacagaccgcggggacgag
tccgtgggggagacgcccaccccgggcgccagcaagaggaagtcccgctgggacgagacg
ccggcgagccagatgggctcctccacgcccctgctcactccggggaagacccccatcggc
acccccgccatgaacatggccacgcccactccaggtcacctgatgagcatgaccccggag
cagctgcaggcctggcgctgggagcgcgagatcgacgagaggaaccggcccctcaccgac
gaggagctggacgccatgttccccgagggctacaaggttctgccccctcctgccggctac
gtgcccatccgcaccccggcccggaagctgacggccacccccacccccatcgggggcatg
accgggttccacatgcagacggaggaccgcaccatgaagaccgtcaacgaccagccgtcc
ggcaacctgcccttcctcaagccggacgacatccagtacttcgacaagctgctggtggag
gtggacgagtcgactctgagccccgaggagcagaaggagcgtaagatcatgaagctgctg
ctgaagatcaagaacggcactcccccaatgaggaaggccgccctgcgtcagatcaccgat
aaggctcgggagtttggggccgggcccctcttcaaccagatcctgcccctgctgatgtcc
cccacgctggaggaccaggagcgccacctgctggtcaaagtcatcgaccgcatcctgtac
aagctggacgacctcgtccggccctacgtgcacaagatcctggtggtgatcgagcccctg
ctgattgatgaggattactacgccagagtagagggcagagagatcatctccaacttggcc
aaggccgccggcctggccaccatgatctccaccatgcgtcccgacatcgacaacatggac
gagtacgtgcggaacacgacggcgcgcgccttcgccgtggtggcgtccgcgctgggcatc
ccgtcgctgctgcccttcctcaaggccgtgtgcaagagcaagaagtcctggcaggcgcgc
cacaccggcatcaagatcgtgcagcagatcgccatcctcatgggctgcgccatcctgccc
cacctgcgcagcctggtggagatcatcgagcacggtctggtggatgagcagcagaaggtc
cgcaccatcagtgccctggccatcgctgctctggcggaggcggccacgccctacggtatc
gagtccttcgactccgtgctgaagcccctctggaagggtatccgccagcacaggggcaag
ggtctggccgccttcttgaaggccatcggctacctgatccccctgatggacgccgagtac
gccaactactacaccagggaggtgatgttgatcctcatcagagagttccagtctcctgac
gaggagatgaagaagatcgtgctcaaggtggtgaagcagtgctgtgggaccgacggtgtc
gaggcgaactacatcaagaccgagatcctgccccccttcttcaaacacttctggcagcat
cggatggctctggatcgccgcaactacagacagctggtggacaccacggtggagctggcc
aacaaggtgggcgcggccgagatcatctcgcgcatcgtggacgacctgaaggacgaggcg
gagcagtacaggaagatggtcatggagaccatcgagaagatcatgggcaacctgggcgcc
gccgacatcgaccacaagctggaggagcagctgatcgacggcatcctgtacgccttccag
gagcagaccaccgaggactctgtgatgctgaacggtttcggcaccgtggtgaacgccctg
gggaagcgggtcaagccctacctgccgcagatctgcggtaccgtcctgtggcgtctcaac
aacaagtccgccaaagtccgtcagcaggccgccgacctcatctccaggaccgccgtcgtc
atgaagacctgccaggaggagaagctgatggggcatctgggggtggtgctgtacgagtac
ctgggggaggagtaccccgaggtcctggggagcatcctgggggcgctgaaggccatcgtc
aacgtcatcggcatgcacaaaatgaccccgcccatcaaggacctgctgccgcgtctgacg
cccatcctaaagaatcggcacgagaaggtgcaggagaactgcatcgacctggtgggccgc
atcgcagacaggggggctgagtacgtgtcggcgcgggagtggatgaggatctgctttgag
ctgctggagctgctgaaggcccataagaaggccatccgccgagccaccgtcaacaccttc
ggctacatcgccaaggccattgggccccacgacgtgctggccacgctgctgaacaacctg
aaggtgcaggagcggcagaaccgcgtgtgcaccacggtggccatcgccatcgtggccgag
acctgctcgcccttcaccgtgctgccggcgctgatgaacgagtaccgcgtgcccgagctc
aacgtgcagaacggcgtgctcaagtccctctccttcctgttcgagtacatcggcgagatg
ggcaaggactacatctacgccgtcacccccctgctggaggacgctctcatggaccgggac
ctggtgcacaggcagacagcgagcgcggtggtgcagcacatgtccctgggcgtgtacggg
ttcggctgcgaggactcgctcaaccacctgctgaactacgtgtggcccaacgtgttcgag
acgtcgccccacgtcatccaggcggtgatgggcgccctggaggggctccgcgtggccatt
gggccctgccgcatgctgcagtactgcctgcagggcctgttccacccggcgcggaaggtg
agggacgtgtactggaagatctacaactccatctacatcgggtcccaggacgcgctgatc
gcccactacccccacgtctacaacgacgagaagaaccccttcatccgctacgagctggag
tacttcctgtga
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