Conger conger (European conger): 133123712
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Entry
133123712 CDS
T10633
Symbol
trim25l
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ccog Conger conger (European conger)
Pathway
ccog04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
133123712 (trim25l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccog04121
]
133123712 (trim25l)
Enzymes [BR:
ccog01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133123712 (trim25l)
Ubiquitin system [BR:
ccog04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133123712 (trim25l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
Tweety
REV1_C
HisKA
ALMT
UPF0242
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
133123712
NCBI-ProteinID:
XP_061090176
LinkDB
All DBs
Position
3:complement(28464243..28474071)
Genome browser
AA seq
752 aa
AA seq
DB search
MSTRLWTEEQFNCPVCLDLPHDPVTIPCGHSYCMDCIKDYWGKDDHVGIYSCPQCRQTFC
PKPSLSRNTMLAEAVEQLRRGASDSTPAPEPSSSSSSSSSAIVPCDVCQGDPLPAVKTCL
VCLASYCEPHLKPHRQAAALKRHELISPTGQLTQKICPQHKYLQEFYCRSCQAFICWLCT
SNQHKDHETTSAKAERIERQKEMGEVQAENQQKLQEREKELKEMKTVVECLKRSADRVHG
DSEQILSELQHSLERLQELVQEVMDSRGQDKLRETQDVVEKLEAEIRELKRRDSEMRQLV
ACEDNIHFLQNFKTLCSPFEGGELPTVTASPDASFEPVCTVLVELRNKIEDLCNQDLCQI
TKTVENMQPFTLGDTVKNAAGTKFSFLKIFGRSSRNTDKQGTSVTARAVERRGLRAPDVR
SRDTRAASPRPHRAHNVERREREQDRASPRPRRGRDVERTEREQASQQRGMESQRRADPA
VAHPVVHPGAGSVAGQYGGGANGTTGPVTAALIQQVIPNPSLFLDDTPTDTMMNPAFPEL
TEISLQSLQAPAPRTRAEFLQYACKLTLDPATAHRRISLSEGNTKATLQGSTQPYPDVPT
RFDSWTQVMCRDPLTADRCYWEVEWRGRGSAVGVAYAPMARKGADGRAGLGYNALSWSLE
LSDTCCAAMHHNEKHDIAVGYSPRVGVFLDRRAGTLAFYSVADNMSPLYTFESGFVEALF
PAFGVGSGVGIGLDFAMGQFSSLTDSIKICPL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaggctttggacagaggagcagtttaactgccctgtgtgtttggacctgcct
cacgacccggtcaccatcccctgcggccacagctactgcatggactgcatcaaggactac
tgggggaaagacgaccacgtggggatatacagctgcccgcagtgccggcagaccttctgc
cccaagccttcgctctccaggaacaccatgttggcagaggctgtggagcagctgcggcgt
ggggccagcgactccacaccagctcccgagccctcctcctcctcctcctcatcctcctcc
gcaatagtcccctgtgacgtgtgccagggggaccccctccctgcggtgaagacctgcctg
gtgtgcctggcgtcgtactgcgagcctcacctgaagccccaccggcaggcggcggcgctg
aagcggcacgagctcatcagccccacggggcagctgacgcagaagatctgcccccagcac
aagtacctgcaggagttctactgccgcagctgccaggccttcatctgctggctctgcacc
agcaaccagcacaaggaccatgagaccacttccgccaaggccgagcggatcgaacggcag
aaggaaatgggtgaggtacaggcggagaatcaacagaagctccaggaaagagagaaggag
ctaaaggaaatgaaaactgttgtggagtgtctcaagcgctcagcagacagggtgcacgga
gactcggagcagatcctgagtgagctgcagcactccctggagcgtctgcaggagctggta
caggaggtgatggactccagaggccaggataaactcagggagacccaggacgtggtggaa
aagctggaggcagagatccgcgagctgaaaaggagagactctgagatgaggcagctagtc
gcttgcgaggacaacattcacttcctgcagaacttcaagactctctgcagcccctttgag
ggaggtgagctgcccaccgtgactgccagtcccgacgcttcttttgagcctgtgtgcaca
gtcttggtggaactacgcaataaaatagaggatctttgcaaccaagatctgtgccagatc
accaagacagtggaaaacatgcagccatttacgcttggggacacagtcaagaatgctgct
ggtacgaagttttcatttttaaaaatatttggacggagctccaggaacacagataaacaa
ggtacctctgtgacggcccgtgctgtggaaagacgaggtttgcgagctccggacgtcagg
agcagggacacacgagcagcgtcaccacgcccacatcgagctcacaacgtggaaaggaga
gagagagaacaagacagagcgtcgccacgcccacgtcgaggtagagatgtagaaaggaca
gagagagaacaagccagtcaacagagagggatggagtctcagaggagagctgaccccgca
gttgcccaccctgtggtccatcctggggcaggaagtgttgcggggcaatatggagggggt
gcaaatggaacaactggtccagtaacagctgcactgatacagcaagtcatacctaatccc
agtctattcctggacgacactccgactgataccatgatgaacccagcattccctgaattg
acagaaatctcccttcagagcctgcaggccccagcacccaggactagagcagagttttta
caatacgcctgcaagctgacccttgaccccgccaccgcccaccgccgcatcagcctatca
gaaggcaacaccaaggccacgctgcaggggtcgacccaaccgtacccggacgtgcccacg
cgcttcgacagctggacgcaggtgatgtgccgtgaccccctgacggccgaccgttgctat
tgggaggtggagtggcgcgggcggggctctgccgtgggcgtggcctacgcgcccatggcg
aggaagggggcggacggccgtgcggggctgggctacaacgcgctctcctggagcctggag
ctgtcggacacctgctgcgccgccatgcaccacaacgagaagcacgacatcgctgtggga
tactcgcctcgcgtgggcgtcttcctggaccgcagagccgggacgctggccttctacagc
gtggcggacaacatgtcgcccctgtacactttcgagagcggctttgtggaggccctcttc
cccgcgtttggagtgggcagtggagtgggcatcggcctggacttcgccatgggccaattc
agctcactcaccgacagcattaagatctgtcctctctga
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