Conger conger (European conger): 133123793
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Entry
133123793 CDS
T10633
Symbol
col4a6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04382
Cornified envelope formation
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133123793 (col4a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133123793 (col4a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133123793 (col4a6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133123793 (col4a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133123793 (col4a6)
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133123793 (col4a6)
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133123793 (col4a6)
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133123793 (col4a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133123793
NCBI-ProteinID:
XP_061090329
LinkDB
All DBs
Position
3:complement(20830749..20922125)
Genome browser
AA seq
1730 aa
AA seq
DB search
MKFWICILAVVLAVESTHAGTKNQEPCSGRDCSGGCQCNPEKGGRGRPGPLGPVGPNGPE
GFVGGPGPSGPKGDKGHLGLRGPSGLKGEKGPMGVPGFAGTDGVPGHPGQDGSRGLPGID
GCNGTIGDPGPRSMDGPPGRPGVTGPPGRKGQKGEPVYTGRGNGIRGEPGLPGLDGLIGQ
NGPSGLPGSMGPRGPDGYPGLPGPPGPPGPTGSPGVGFRGERGDKGDAGLPGPRGEQGEE
TLVGASAISTIFKGDKGDVGLPGDPGRPLVNGVVEFVGFPKGDKGTKGDFGYRGIPGQPG
LPGLPGPLGYPGEVGEKGILGLPGGRGAPGLNGPLGVPGSTGYPGNPGLPGPQGYPGPKG
EHGDQGLPGPPAFADGQGVSVQGPIGEPGISGLPGPTGDQGPLGYPGEPGPPGSSISGIG
RPGADGFPGTDGPKGEKGNPGRPVYGSEGLPGAPGFPGPPGPPGPIGGTRPSNVLPSDVR
GPPGQPGRRGPPGSSGAPGGKGEAGDCQCLGGGGGFDQQGPPGLPGSPGSPGFPGRKGEI
GDTGSPGTPGASGPTGNPGEWGFSGRKGEKGEPSYPVGLGQKGELGGPGPRGLPGDMGRP
GRDGTPGIAGRPGPPGDTGYGVIGERGLPGIAGAKGQLGRPGEPGIGYQGSPGIRGLPGD
PGINGLPGQPGLPGPPGDCCCGQAGVNEASLEEGGATLPCRVSGEDGEPGPPGFPGPPGL
KGQPGFPGDPGRRGFDGIKGDRGDPGTGGLPGPPGFTGPRGDPGAPGLSTDGFPGAQGKN
GLPGLPGEKGKPGEVLGASAGDPGLPGLPGELGDKGQAGTPGLPGGPGFDGRSGVPGLKG
ERGEDGYPGIPGQPGLPGEGGQGGIPGPAGAVGNKGFPGAPGFPGLKGSVGEPGPPGPAG
MKGLPGDGGNPGQPGLRGPQGPPGTAAGNGIPGAPGRKGEKGLAGMLGFPGMPGSPGAPG
VTGSKGLPGFPGRGGLPGEIGTTGLKGDRGTPGLPGPASLPPRVGLLVKGEIGDSGQSGY
SGFPGPRGDKGGPGSAGRQGRPGLPGRPGQEKGKPGVPGLPGTSNVPGLPGPKGSPGIIG
FSGMPGPRGDDGAPGQPGFPGGPGQPGRKGERGDSFSIPGAPGAKGLPGDPGLHGRRGNT
GLPGDAGFPGSSGYSGQKGQPGEPGRPGQMGTPGFPGSKGQGGFPGVRGLDGSPGFPGTP
GALGQKGLPGSPGLDGLNGLGGAKGLPGTPGLSEGGRPGAPGFPGLKGERGPSLSGGPGI
PGAKGARGNQGTPGGVGFPGLPGPQGVSVTSDIVGPPGDLGLPGLDGEQGFRGRPGPMGP
AGPGTYQGDRGDSGLPGFPGIPGALGDPGAPGASGQPGSPGLKGERGEMGFSGTSGQPGI
QGDPGYYGRQGPKGLTGPAGRKGLPGIVLAPPEIPMPKGELGVPGNPGFPGELGPAGQPG
SPGRHGSKGKSGLPGKLGPTGPEGLPGSIGDVGPGGLPGLTGEQGTPGKQGPPGPPGLTA
RSSSIGYTLVKHSQSSRVPMCPQGMAKLWEGYSLLYVEGQDKAHNQDLGLAGSCLPRFST
IPFLYCNANELCYFASRNDKSYWLSTTAPIPMMPVAEQQISQYISRCSVCETPSQAVAVH
SQDLTIPTCPQGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGPRG
TCHYFANKYSFWLTTVQQERQFVEAPPQETLKAGQLRSRVSRCQVCMKIL
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctggatatgtatactagctgttgtcttggctgttgaatctacgcacgcgggg
acgaagaatcaggagccgtgttcaggacgggactgcagtggagggtgccagtgcaacccg
gagaagggaggcaggggtcggccaggacctctggggccagttgggccaaatgggccggaa
gggtttgtggggggcccggggccctcaggacccaaaggagacaaaggccatttaggactc
aggggaccgtctgggctaaaaggagaaaagggaccaatgggcgtgccaggtttcgcagga
actgatggtgttccaggtcaccctggacaggatgggagcaggggccttccaggaatcgat
gggtgtaatggcaccatcggcgacccaggtcccaggtctatggatggacctccaggtcgg
cctggtgttactgggccacctggtcggaagggtcagaaaggagagcctgtgtatacggga
cggggcaatggcattaggggagagcctggtttgcctggactggatggtctgattggtcaa
aatggtccgagtgggctcccagggtcaatgggtccaagaggtccagacggataccctgga
cttcctggtcctccaggtccacctggtcctacagggagccctggtgtaggtttccggggg
gaaagaggagacaagggggacgcaggtctacccggacctcgaggagagcagggggaagaa
acgctagtaggcgcatcagccataagcactatcttcaaaggagataagggagacgtgggc
ctgcccggcgaccccggccgcccactggtcaatggagtggtggagtttgtgggctttcct
aaaggagacaaaggaactaagggtgactttggttacagggggataccaggtcagccagga
ctacctggacttccgggccctttggggtacccaggtgaggttggcgagaaaggaattctg
ggactgccaggtggacggggagctcctggtttgaacggacctcttggggttcctggcagc
acggggtaccccggtaacccaggtctgcctggacctcaaggatatcctgggcctaaggga
gaacatggagatcaaggattacctggaccccctgcatttgctgatgggcaaggggtctct
gtccaaggtcccataggagaaccagggatcagtggcttaccaggccctacaggtgaccag
ggacctctggggtacccaggagaacctggacccccagggagctcaatctccggcataggt
cggcctggagctgatgggtttccagggaccgacggcccaaaaggagagaaaggaaaccca
ggacggcctgtctatggatctgaggggctcccaggggccccaggctttccaggccctccg
gggcctccagggccaattggtggaactcgcccttcaaatgtactgccatctgacgtacgt
ggacctccaggacagccaggccggagagggccacctggaagttcaggtgcaccaggagga
aaaggagaggcgggtgactgccagtgtctcggtggtggtggggggtttgaccagcagggc
ccaccaggccttccagggtcccctggttcccccgggtttcctggaagaaagggtgaaatt
ggtgacacggggtcaccaggtactcctggcgcctcaggtcccactggtaaccctggtgaa
tggggcttttcaggacggaagggggagaagggtgaaccctcttacccagtgggcctgggc
cagaaaggtgaactaggtggaccagggccccgtgggctcccaggagacatgggccgtcct
ggccgggacggcactcctgggatcgcaggacgtcctggaccccctggagacactggctat
ggcgtgatcggggaacgaggactcccagggattgctggcgctaaggggcagctcggcagg
ccaggagagcctgggattgggtaccagggctctcctggtatccgtgggctgcctggagac
ccgggtatcaatggccttcctggacagcctggcttacctgggcccccaggtgactgttgc
tgtgggcaggcgggggttaatgaggcctctttggaagagggaggcgcaactttgccctgt
cgggtctccggtgaagatggtgaaccaggtccacctggattcccagggcctccagggttg
aaaggccagcctggtttcccaggggatcctgggcgacgtggttttgatggcataaagggt
gacagaggtgacccaggcactggggggctgcctggaccaccgggcttcacaggccccagg
ggggacccaggggccccagggctctcgactgacggctttcctggcgctcagggaaagaat
ggtctgccaggtcttcctggggagaagggaaaaccgggtgaggtgctgggggcctctgca
ggagacccaggactccctggactccctggagaactcggagacaaaggacaggcagggaca
cctggactgccaggtggaccaggttttgatgggcgttcgggggtacctgggctaaagggc
gagcgaggtgaagatggctatcccggaatcccaggtcagcctggcctacctggggaaggt
gggcaaggagggatcccaggccctgcaggagctgttgggaacaagggtttccctggagct
ccaggattcccagggctcaagggctctgtcggagaacccggaccaccagggcctgcagga
atgaagggcctgcccggagatggagggaaccctggtcaaccaggactcaggggcccccaa
gggccaccaggaactgccgccggaaatggcatccctggagcaccaggaaggaagggtgag
aaggggttagctggtatgttggggttccctggaatgccaggaagccctggtgcccctggg
gtaactgggtcaaagggtttaccgggcttccctggacggggtggcttgccaggagaaatt
ggcaccacgggtctaaaaggggatcgggggacacctggtctgcctggaccggcatctcta
cctccccgagtcggcctgctggtgaaaggggagatcggggacagtggccaaagcggctat
tctggattccctggaccaagaggtgataaaggaggcccggggtcagcagggcggcagggc
cggcccggtctgcctggacgacctggtcaggagaagggcaaacctggggtaccaggcctc
cctggaacctccaatgttcctggcctgcctggacccaagggatctccaggaattattggc
ttctctggcatgccagggcctaggggtgatgatggggcacctggtcaacctggattcccc
ggaggcccaggacagcctggtagaaaaggtgagcgtggtgattccttcagtatacctgga
gcccctggtgctaaaggacttcctggagaccctggattacatggtagaagaggtaacaca
ggccttccaggagatgctggtttccctggaagttctggatacagtggacagaagggccaa
cctggagagccaggtcgtccaggacagatgggtaccccagggttccctggtagcaaaggc
caaggtggtttcccaggagtcagagggttggatggttcacctggttttcctggaactcca
ggagctcttggccagaaaggtttacctggctctccaggtcttgatggtctcaatggactc
ggaggggcgaaaggtctacctggaactccaggtcttagtgaaggaggccgacctggggca
ccaggctttcctgggctgaagggggaaagagggccatctttatcaggaggtcctggcatc
cctggagccaaaggggccagaggaaaccaaggtacccctggtggggtaggtttccctggt
ctacctggacctcaaggggtctccgtcacctctgacattgtagggccccctggagatctc
ggtctacctggattagatggagagcaaggtttccgtggccgcccaggccccatgggtcct
gctggcccgggcacttaccagggtgacagaggtgactcaggactccctggcttccctggc
atacctggtgcacttggagaccctggggccccaggagcctctggacagcctggcagccca
ggacttaaaggcgaaaggggtgaaatggggttcagtggaacttcaggacaaccaggcatc
cagggagaccctggatactatgggagacaagggccaaaggggctcacagggccggctggc
aggaagggactccctggtatagttcttgcaccacctgaaattccgatgcctaaaggagag
cttggagttccaggaaacccagggtttcctggagagttgggccctgctggtcagcctggg
agtcctggccgccatggttcaaaaggaaaatctggacttccggggaagttggggcctact
gggccagaaggtctaccaggatcaattggagatgttgggccaggaggactgcctggactt
actggagagcagggtacccctgggaagcaaggcccccctggcccccctgggctcactgcc
cgcagcagcagtatcggctacacgctggtgaagcacagccagtccagccgggtgcccatg
tgtccacagggcatggctaagctatgggagggctacagcttgctgtatgtggaaggccag
gacaaggcccacaatcaggacctgggattggcaggttcctgtttgccccgtttcagcacc
atccccttcctgtactgcaatgcgaacgagctctgctatttcgcaagccgcaatgacaag
tcctactggctgtccaccactgcgcccatccccatgatgcctgtggcggagcagcagatc
tcgcagtacatcagccgctgctccgtgtgtgagaccccctcccaggccgtggccgtacac
agccaggacctcaccatccccacctgtccccagggctggaggagcctgtggattggctac
tccttcctgatgcacaccgcggctggggcggagggtggcggacagtccttggtttctccc
ggctcttgcctggaagacttccgcgccacccctttcatcgagtgcaacggcccccgcggg
acgtgccactactttgccaacaagtacagcttctggctcaccactgtgcagcaggagcgg
cagtttgtggaggccccaccacaggagaccctgaaggccggccagctgcgatcgcgcgtc
agccgctgccaggtctgcatgaagatcttgtag
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integrated database retrieval system
