Conger conger (European conger): 133123805
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Entry
133123805 CDS
T10633
Symbol
polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03020
RNA polymerase
ccog03420
Nucleotide excision repair
Brite
Enzymes [BR:
ccog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133123805 (polr2a)
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
133123805 (polr2a)
DNA repair and recombination proteins [BR:
ccog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
133123805 (polr2a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133123805
NCBI-ProteinID:
XP_061090361
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Position
3:19592676..19607550
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AA seq
1969 aa
AA seq
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MHGPPSGDSACPLRLIKRVQFGIISPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVIERSGRCQTCAGNMTECPGHFGHIELAKPVFHVGFITKIMKVLRCVCFFCSKLLVDSN
NPKIKDILGKSKGQPRKRLTHVYDLCKGKNICEGGEEMDNKFGVEQAEAEEDITKEKGHG
GCGRYQPCIRRSGLELYAEWKHVNEDSQEKKILLSPERIHEIFKRISDEEDVILGMDPKF
ARPEWMIVTVLPVPPLAVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQSGAAAHV
IAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSIKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLQIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIIIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDEEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DITRLFYSNIQTVVNNWLLIEGHSIGIGDSIADAKTYLDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGEAVE
FQNMATLKPSNKAFEKKFRFDCTNERSLRRTLQEDVVKDVMTNAHVQSALEREFEKMRED
REILRAIFPTGDSKVVLPCNLARMIWNAQKIFRINPRTPTDLNPLRVVDGVHDLSKKLVI
VNGEDPLSRQAQQNATLLFNIHLRSTLCSRRMTEEFRLSTEAFDWLLGEIETKFNQSIVH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVTEDQEWVNVYYEMPDF
DVTRISPWLLRIELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKFQEDEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIII
TEDGEFKALQEWILETDGVGLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEA
SSHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGIGVAGPTGMF
FGSAPSPMSGMSPSMTPWNTGATPAYGAWSPSMGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPK
YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEENN
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccctccggcgacagcgcatgcccattgcgcctcatcaagagagtgcaa
ttcggcatcatcagcccagatgagcttaaacggatgtccgtcacagaaggaggtatcaaa
taccctgaaaccacggaaggggggcgtcccaaattggggggtctgatggatccacgacaa
ggggtcatcgagaggtcaggcaggtgccagacgtgtgcaggtaacatgacagaatgtccg
gggcattttggccacattgagctggccaagcccgtttttcacgtgggcttcatcaccaaa
atcatgaaggttctgcgctgtgtctgcttcttctgctccaagctgctggttgattcgaat
aaccccaaaatcaaggacatcctgggcaagtcaaagggtcagccgcggaagagactgaca
cacgtgtatgacctatgcaaaggaaaaaacatctgtgaggggggtgaggagatggacaac
aagtttggtgtggagcaggctgaggctgaggaggacattacaaaggagaagggccacggc
ggttgtgggcgctatcagccctgtatccgccgctcggggctggagctgtacgccgagtgg
aaacacgtcaacgaggactcccaggaaaagaagattctgctgagcccggagcgcatccac
gagatcttcaagcgcatctccgacgaggaggacgtcatcctgggcatggaccccaagttc
gctcggcccgagtggatgatcgtcaccgtgcttcccgtgcccccgctcgcagtccgaccc
gctgtggtcatgcagggctccgcccgtaaccaggacgatttgacgcacaagctggcggac
atcgtgaagatcaataaccagctgcggcggaatgagcagagcggggcggcggcccacgtg
atcgccgaggacgtgaagctgctgcagttccatgtggccaccatggtggacaacgagctg
cctggcctgcccagggctatgcagaaatcgggccgcccccttaaatctatcaaacaacgg
ctgaagggcaaggagggccgtgtcagaggcaacctgatgggcaagcgtgtggacttctcc
gcccggactgtcatcaccccggacccaaacctgcagattgaccaggtcggcgtcccgcgc
tctattgctgccaacatgaccttccctgagattgtcacccccttcaacatcgacagactc
caggagctggtgagaagggggaacagtcagtatcctggggccaaatacatcatccgtgac
aacggtgaccgtattgacctgcgtttccaccccaaacccagtgacctgcacctccagatt
ggctacaaggtggagcggcacatgtgtgatggtgacatcatcatctttaacagacagccc
acattgcataaaatgtccatgatggggcacagagtgcgaatcctgccctggtccaccttc
cggctcaacctcagtgtgaccaccccatataacgctgactttgacggggacgaaatgaac
cttcacctgccgcagtccctggagacgcgggcggagatccaggagctagccatggtgccc
cgcatgatcgtcacgcctcagtccaacaggcctgttatgggtatcgtgcaggacacactc
acagctgtgcgcaaattcaccaagagggacgtctttttggagaggggagaggtgatgaac
ctgctcatgttcctgtccacctgggacgggaaagtcccacagcctgctatcctgaaaccc
cggccactctggaccggcaagcagatcttcagcctcatcatccccggccacatcaatgtc
atccgcacccacagcactcatcccgacgaggaggacagcggcccctacaagcacatctcc
cctggagacacaaaggtgatcgtggagaacggagagctgatcatgggcattctttgtaag
aagtccctgggtacctccgctggttctctggtccacatatcctacctggagatgggccac
gatattacccgcctcttttattccaacatccagactgttgtcaacaactggctgctcatt
gagggtcactctatcggtattggtgactccatcgctgatgccaagacttacttggacatt
cagaacaccatcaagaaggccaaacaggatgtgatagaggtcattgagaaggcccacaat
aacgagctggagcccactcctggtaacaccctgaggcagacttttgagaaccaggtgaac
cgcatcctgaacgatgctcgtgataagactggctcctctgcacagaagtccctgtctgag
tacaacaacttcaagtccatggtggtggcagggtccaaaggatccaagattaacatctcg
caggtcattgcagtggtggggcagcagaacgtggagggtaagcgcatacccttcggcttc
aagcaccggacgctgccgcacttcatcaaggacgactacgggcctgagagcaggggcttt
gtggagaactcctacctggccggcctcacgccaacagagtttttcttccatgccatgggt
gggagagaggggcttattgatacagctgtgaaaactgctgagactggttacattcagcga
cgtctgatcaagtctatggagtctgtgatggtgaagtacgacgccaccgtgcgtaattcc
atcaaccaggtggtgcagctccgctatggagaggacgggctggctggagaggctgtggag
ttccagaacatggccacactcaagccctccaacaaggcctttgagaaaaagttcagattt
gactgcaccaacgagcgatccctgcggcgcaccctgcaggaggacgtggtgaaagacgtg
atgaccaacgcacacgtgcagagtgcactggagagagagtttgagaagatgagggaggac
cgggagatcctgcgagccatcttccccacaggagatagcaaggtggtgctgccttgtaat
cttgccaggatgatttggaacgctcagaagattttccgcatcaatcctcgcactcccaca
gacctcaaccccttgcgtgttgtagatggcgtgcatgacctgagtaagaagctggtgatc
gtgaacggggaagaccccctgagccggcaggcgcagcagaacgccacgctcctcttcaac
atccacctgcgctccaccctctgctcgcgccgcatgaccgaggagttccgcctcagcacc
gaggccttcgactggctgctgggggagatcgagaccaagttcaaccagtccatcgtgcat
cctggcgagatggtaggagctctggctgcccagtctctgggagagccggccactcagatg
accctgaacaccttccactacgccggtgtgtctgccaagaacgtcacactgggtgtgcct
cgactcaaggagctgatcaacatctccaaaagaccgaagaccccctcgctcacagtattc
ctgttgggccaggcggctcgtgacgctgagagggccaaggacatcctgtgtcgtctggaa
cacaccactctgcgcaaggtgaccgccaacacggccatctactacgaccccaacccccag
agtacggtggtgacagaagaccaggagtgggtcaacgtgtactacgagatgcccgacttc
gacgtgacgcgcatctcaccctggctgctccgcatcgagctggaccgcaaacacatgacc
gaccgcaagctgaccatggagcagatcgctgaaaagatcaatgcaggctttggagatgat
ctgaactgcatcttcaacgatgacaacgcagagaagctggttctgagaatccgcatcatg
aacagtgatgagaataagttccaagaggatgaagaggtggtagacaagatggatgatgac
gtattcctgcgctgcattgagtccaacatgctgactgatatgacgttacagggcattgag
cagatcagcaaggtgtacatgcacctcccccagacggacaacaagaagaagatcatcatc
acggaggacggagagttcaaggccctgcaggagtggatcctggagactgatggcgtgggg
ctcatgagagtactcagtgagaaggacgtggacccggtcagaacaacctccaacgacatc
gtggagatcttcacggttttgggcatcgaggctgtgcgcaaggccctggagagggagctg
taccacgtcatctcctttgacggctcctacgtcaactaccgccacttggccctgctgtgc
gacaccatgacgtgccgtggccatctgatggccatcactcgacacggcatcaaccggcag
gacaccgggcccctcatgaagtgttcctttgaggagacggtggatgtgctgatggaggct
tcctcgcacggggagagtgaccccatgaaaggcgtctctgagaacatcatgctgggtcaa
ctggcccccgccggcaccggatgctttgacctgctgctggatgcagagaaatgcaaatac
ggcatggagatccccaccaacatccctggcatcggggtggcaggaccgacgggcatgttt
ttcggctctgctcccagtcccatgagcgggatgtctccctcgatgaccccctggaacaca
ggagccacacctgcttatggtgcctggtcacccagcatgggtagcggaatgacccccgga
gcagcgggtttctcgcccagcgcagcgtccgacgccagcggcttctccccggggtactcc
ccagcctggtcgcccacgcccggctcgcccggatccccaggccctgccagcccctacatc
ccctctccaggtggagcgatgtctcccaactattcgccgacctcccctgcctacgagccg
cgttcgccgggtggctacacgccacagagccccggctactctcccacgtcgccctcttac
tcgccaacgtctccctcctattcgcccaccagccccaactacagccccacctccccgtcc
tattcgcccacctcgcccagctactccccgacctcgccctcctattcgcccacgtctccc
agctactccccgacctcgccctcctattctcccacctcgccttcgtactcccccacctcc
ccctcttactcccccacctcccccagctacagccccacctcgcctagttacagccccact
tcccctagctacagccccacctctccgtcgtattcccccacttctccttcctactcaccc
acctcgccgtcctactctcccacgtcccccagttactctccgacctctccttcctactcc
cctacctctccgagctatagccctacttcccccaactacacccccacctcaccctcttac
tctccaacatcgccctcatactcccccacatctccgtcttactcccccacctcacccaac
tacacccccaccagccccaactactcccctacctctccctcttactcaccaacctcgcca
tcctactccccgtccagcccccgctacacccctcagtcccccacctacacgcccagctca
ccctcctacagccccagctcaccctcctactcccccacctcccccaaatacacccccacg
tccccctcttacagccccagctctccggaatacacccccacttccccaaaatactccccc
acttccccgaagtactctccgacgtctcccaagtacagccccacctcacccacttactcc
cccaccaccccgaaatacagccccacctctccaacctactcccccacctctcccacctac
acaccgaccagccccaaatactccccaacctccccaacttactcacccacctctcccaaa
tattctcccacctctcccacctactcgcccactagccctaagggctccacctacagccca
acctctccgggctacagccccacgtctcccacctacagcctcaccagcccggccatcagc
cccgatgacagcgacgaggagaacaactga
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integrated database retrieval system
