Conger conger (European conger): 133123914
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Entry
133123914 CDS
T10633
Symbol
rlim
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF12-B
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccog04121
]
133123914 (rlim)
Enzymes [BR:
ccog01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133123914 (rlim)
Ubiquitin system [BR:
ccog04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133123914 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
Prok-RING_4
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
133123914
NCBI-ProteinID:
XP_061090619
LinkDB
All DBs
Position
3:23057189..23064572
Genome browser
AA seq
701 aa
AA seq
DB search
MENSDSSEQGGSEQPDAQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLSRLQQIKDGPEQLNTGESRTEEAGGPEGQEEGSNGDSLLDWLNTVRRTGNTTRSG
HRGNQSWRAVSRTNPSSGDFRFSLEINVNRNIAEQQARNEEGEQAEGEGEEPVGLVAEPE
MPMETAEVVEEPVVEELAVIVEPEPDLPRSETPSVVLPDSPQVQAVPAPRPRGLPVTQSF
SYRVQVPPTPGPDEPIEPRRPPVTQSFSQQVQAPPPPRAEDPPPPSSSSSSSSSSSIPRD
PVVXPPGPEPSXPPRPRAEDPPRRGQRRARSRSPEQRRTRARSERSRSPLGAALLAPEPL
PEAVVEGSSRTRQHILSRQSPAEHDAPPGGAATVDPPAVVAAAPEAEPQAGVGGAAGRRP
PTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQTSNNTFLYESERGGFRRTFSRSERAGVR
TYVSTIRIPIRRISDAGLNEATSMALQSMIRQIMTGFGELSYFMDSDSDSSDSNRGPNPP
PEHGDALLNPDATAAPAASVSADSPEPRTDERAAEAGAPAAGAGREGRAGPRGPISLEEP
GSLPFLRLAHFFLLNDDEDDQPRGLTKEQIDNLSTRNFGENDALKTCSVCITEYAQGNKL
RKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVPANRESVV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcggacagttcagagcaaggtggcagcgagcagccggacgcccagcgtaga
aggcagctggatcgactggacagagaggaagccttttaccagttcgtgaacaaccttagc
gaggaggactaccggcttatgagagacaacaatcttctcggcactcctggtgagataacc
gaagaggagctgttgagtcgccttcagcaaatcaaagatgggcctgaacagttgaacacc
ggtgaaagcaggaccgaagaggctggaggaccagagggccaagaggaaggttctaatggg
gactcccttctggattggctgaacactgtgagacgaacaggcaacacgaccaggagtggc
caccgagggaaccagtcatggcgagcggtgagcaggaccaaccccagcagtggtgacttc
cgcttcagcctggagatcaacgtcaaccgcaacattgctgagcaacaggcgaggaatgag
gagggggagcaggcggaaggggaaggggaggagccagtggggctggtggcggagcctgaa
atgcccatggagaccgcagaggtggtggaggagccggttgtggaggagctggctgttatc
gtggaacccgaaccggatctccccagatctgagactccttccgtggtcctacccgatagc
cctcaggtccaagctgtgcctgcccccaggcccaggggactccctgtgactcagtctttt
agttatcgggtacaggtcccgcctactcccgggcctgacgagccaattgagcctcgcaga
ccccctgtgacccagtcctttagccaacaggtccaggctccgcctcctcccagggccgag
gaccccccccccccctcctcctcctcctcctcctcctcctcctcctcgatcccccgtgac
ccagtcgtttagccaccaggtccagagccctccnntccccccaggcccagagctgaggac
ccgccgcgcagaggccagagacgggcacgcagccgcagcccggagcagcgcaggaccagg
gctcgcagcgagaggagccgctctcctctaggggccgctctcctggccccggagcccctc
ccggaggcggtggtggagggcagctccaggactcgtcagcacatcctgtcccggcagagc
ccggccgagcacgatgccccgccaggcggggcggcgacggtagaccctcccgcggtggtg
gctgcggcccctgaggcggagccccaggccggggtgggaggggcggccggccgtcgccct
cccaccatcatgctggacctgcaggtgcggagagtgcggccaggggagtaccggcagagg
gacagcattgccagccgcacccgctcccgctcgcagacctccaacaacaccttcctttac
gagagcgagcgtggcggcttccgccggaccttctcgcgctcggagcgggccggcgtgcgc
acctacgtcagcaccatccgcatccccatacgccgcatctcggacgcggggctcaatgag
gccacctccatggccctgcagtccatgatccggcagatcatgacgggcttcggggagctc
agctacttcatggactccgactcggattcctctgactccaaccgggggcccaacccccct
ccggaacacggagatgcacttctcaaccccgacgcgacggcggcgccggcggcctccgtt
agcgccgacagccctgagccacggacagatgagagggccgcggaggccggcgcgcctgct
gccggggccggcagggagggccgggcgggaccccggggccccattagcctggaggagccg
ggctccctacccttcctccgtctggcgcacttcttcctgctcaacgatgacgaggatgac
cagccgcggggcctcaccaaagaacagatcgacaacctctccacccgtaacttcggcgag
aacgacgccctgaagacctgcagcgtgtgcatcacggagtacgctcagggcaacaagctg
cgcaagctaccctgctcccacgagtaccacattcactgcatcgaccgctggctctccgaa
aactccacctgccccatctgccgcagggctgttctggtgcccgccaaccgtgagagcgtg
gtctag
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