Conger conger (European conger): 133124144
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Entry
133124144 CDS
T10633
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ccog Conger conger (European conger)
Pathway
ccog04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133124144 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133124144 (vps8)
Membrane trafficking [BR:
ccog04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
133124144 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
WD40_CDC20-Fz
zf-RING_Vps41
zf_RING_Vps8_fungal
TPR_VPS8_2
zf-RING_11
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
zf-RING_UBOX
Beta-prop_EML_2
Beta-prop_WDR3_1st
zf-RING_5
WDR55
ANAPC4_WD40
EIF3I
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
133124144
NCBI-ProteinID:
XP_061091070
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All DBs
Position
3:37911163..38021911
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AA seq
1416 aa
AA seq
DB search
MSESPDTRSLVSASSQLNLMDIDAIDDKEFDIPQVDTPPTLESILNEPEDEEEPFVLEDT
YLLNTENMDAHSCETSSLASSDSGDRTHLKRRRRPVESTATVHGSVLRHSTLKGISAQIV
SAADKVDAGLPTAITVSSVIAVGTSHGLALLFDASQALRLCLGSTAVGAQYGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTITEAHPPGTAILHVKFTDDPTLAVCNDSGGSV
FELSFRRVMGVRSCDSRCLFSGSKGEVCCIEPLHSSTELKDHPITQYSLLAMASLTKILV
IGLKPSLKVWMTFPYGKTDPASVPQLAWQFVAVQKAVNPMLAFCRGDTVHFLLVKKEESG
AIHVIKQRQLHLNCDIISLTWINSRTLVLMDSGEKLHVVDRASQEELESLDMAEVQLVYN
SSHFKSLATGGNVSQALALVGEKACYQSGCSYGGQIVYLGTKSVHIMTLRNWRERVDYLL
KQERFVEALSLAWSFHEGTAKAVVGLFGDPAKRKGVVSDKMVEILFQYADRSLKKCPEQG
KIQVMEQHFQDMVPVMVDYCLLLQRTDLLFNQIYGRLVENSVARGVFLESLEPYILSERL
GCLTAPVMRDLLSHFQDNGMMDSVENCLVHMDVTSLDIQQVVQMCWENQLYDAMIYVFNS
GMNDYISPMERLFQVIGSPLREGKSLTDEQVIMGNKLLVYISCSLAGRAYPLGDIPEDLV
PLVKNQVFEFLIRLHSAEASQEEEVYPYVRTLLHFDTREFLNVLALTFEDFQNDKQALEY
QQRIVDILLTVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSPDD
DSRHTERQQVLLELLQVGGIVQFDESRLLYLAEKAEFYQICEFMYEKKHLYDKIISCYLK
DPLRKEEVFNYVHNILSIPGYAPEEKQSVWQEALEHMQELVAIDPAKAADLVSMHFSEAV
QPIIDKLEDDSLVFQFLKCLLAPREGPHPQGVLRLSPDLHELHVGLLCRFSPCQVIGFLR
FSQDYRLEETIKITEQYSLHEATAYLLEKKGDVHGAFQVLLQTLKDKLIVLTQESQTNTE
EEEQLPLQRLEVALSDIISLCHRSSPSLNQQQREALWFPLLEAMMSPQKLLKGPAWRHTS
EALKELTMRVLNSMTSFIALPAIIQRILQVAESCWPQQNETMPSDPVYGKGKLAEIQGLI
LGMLDTFNYEQTLLETTTNLLNHDLHWSLSHLRAAVSRGLHPRQDHCSICLQQYKRRQEA
QDEIIIFSCGHLYHCQCLQNKECGVAGERLHRWSCYKCTSSQGGRGGERNASSGGRSRST
SLAQTKVTSARRGSWGDPTGKKLFMDTTLDAQQSQSWEQLRCIYRGPSRLAILTELSHSR
GNEKPSLLNPSQPGSGSIFHSENFQLKLSPPPLIEE
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatcgccagatacgcgcagtttggtttctgcgtcttcccagctgaatttaatg
gacatagatgcgattgatgacaaagagtttgacatccctcaagtggacactcctcccacc
ttggagagcattctgaatgagcctgaggatgaggaggagccttttgtcctggaggatacg
tacctgctcaacacggagaacatggatgcccactcctgcgagacgtcctccttggccagc
tctgacagcggtgaccgcacacacctgaagaggaggaggaggccagtggagagcactgcc
acggtacatggctctgtgctccgacacagtaccctgaaaggcatctccgcccagattgtc
tctgctgctgacaaagttgatgctgggttgcccacagcaataacagtgtccagtgtcatt
gcagttgggacatcacatgggctggccctgctctttgacgcgagccaggcgctgcggctg
tgtctgggcagcacagcggtgggggcgcagtatggcgccgtgtctgcgctcagcatcaat
cacgactgctctcgcctgctctgcggcttcgcaaaaggacagatcaccatgtgggatctg
gccaatgggaagcttttgcggaccatcacagaggcccacccccctggtactgctatcctg
cacgtcaagttcactgatgacccaacacttgctgtctgtaatgacagtggcgggtcagtg
tttgagctgtccttcaggagagttatgggagtgcgctcgtgcgattcccgctgtctcttc
agcggttcgaagggggaggtctgctgcattgagcccctgcactccagcacagagctcaaa
gaccaccccattacccagtactccctgttggccatggcgtccctgaccaagattttagtg
atcggattaaaaccgtctctcaaagtgtggatgacatttccttacggtaagacggatcca
gccagtgttccacagcttgcctggcagtttgtggctgtgcagaaagcagtgaatcccatg
ctggccttctgcagaggcgacactgttcacttcctcttggtaaagaaggaggagtcaggt
gctatccatgtcatcaaacagagacaactgcacctcaactgtgacatcatcagcctgaca
tggataaactcgcggaccctggtcctgatggacagtggggagaagcttcacgttgtggac
cgggccagtcaggaagagctagagagcctggatatggccgaggtccagctggtctacaac
agcagtcacttcaagtctttggccaccgggggcaacgtcagccaggccttggcattagtg
ggggagaaggcatgctaccagtccggctgcagctatggaggtcagatcgtctatttggga
accaagtctgtccacataatgacactaaggaactggcgagagagggtggattacctgttg
aagcaggagagatttgtggaggcgctgtctctagcttggtcttttcatgaaggcactgca
aaggctgtggtcgggctgtttggagaccctgctaagcggaaaggagtggtatccgacaag
atggtggagattctgtttcagtatgcagaccgctctctgaagaagtgtccggaacagggg
aagatccaagtgatggagcagcacttccaggacatggttcctgtcatggtggattactgt
ttgctgctgcagaggacggacttgctcttcaatcagatttatgggcgtctggtggagaac
tcggtcgcccggggggtgtttctggagagcctggagccctacatcctgagtgagcgtctg
ggctgtttgacggcgcccgtcatgcgggacctgctcagtcacttccaggacaacggcatg
atggacagcgtggagaactgcctggttcacatggacgtcaccagcctggacatacagcag
gtggtgcagatgtgttgggagaaccagctttacgacgccatgatctacgtcttcaacagc
gggatgaatgactacatcagccctatggagagattgttccaggtgattgggtcaccattg
cgtgaggggaagtctctgacagatgaacaggtgattatgggtaataagctgcttgtgtat
atcagctgttctttggcaggacgagcctaccctctgggggatatcccagaagaccttgtt
cctctggtgaagaaccaggtgtttgagttcctgatccgtcttcactctgcggaggcttcc
caagaagaggaggtgtacccctacgtccgcacactgctgcactttgacacccgcgagttc
ctcaacgtcctggccctgacctttgaggactttcagaatgacaagcaggccttggagtac
cagcagcggattgtggatattttattaacggtgatggtggagaactcagacttcaccccc
tcccaggtcggctgtctcttcacgtttctggcacggcagctagccaagcccgacaacacc
ctctttgtgaacaggaagctattcgaccaggtcctggagtttctctgtagtccagatgat
gactccagacacacagagagacaacaggtgctgctggaacttctccaggtggggggcatt
gtccagtttgatgagagccgactcctctatctggctgagaaggccgaattctaccagatc
tgtgagttcatgtacgagaagaaacacctgtatgacaaaatcatctcctgctacctgaaa
gatccgctcagaaaggaggaggtattcaactatgtccacaacatcctgtctatcccggga
tacgcgccagaggagaagcagtccgtctggcaggaagccctggaacacatgcaggagctg
gtggccatcgaccccgccaaagcagcagacctggtgtccatgcacttctctgaggcggtg
cagcctataattgacaagctggaggatgattccttggtgttccagtttctaaagtgtctt
ctagccccaagagaaggccctcatccccagggtgtcctgagactcagccctgacctccac
gagctccacgtgggactgctgtgccgtttcagcccctgccaggtcattggtttcctgcgc
ttctctcaggactacaggcttgaagagaccataaagatcacagaacagtacagcctccat
gaggccacggcctacctgctggagaagaagggagatgtccatggagctttccaagttctg
ctgcagacgctgaaggacaaactcatcgtcctcacccaagagagccaaactaacacagag
gaggaggagcagcttccgctgcagaggttggaggtggctctgagtgacatcatctctctg
tgtcacaggagctctccgagcctgaatcagcagcagagagaggcactgtggtttcccctt
cttgaggccatgatgtccccacagaaactcctgaaggggcccgcctggcgccacacctca
gaagctctgaaggaactgaccatgcgggtcctcaacagcatgacgagcttcatcgccctg
cccgccatcatccagcgcattctgcaggtagcagagtcctgctggccacagcaaaacgag
accatgccttcggacccagtgtatgggaaaggcaagctggctgagatccagggactgatc
cttggcatgctggacacctttaattatgaacagacactactggagaccaccaccaacctg
ctgaaccacgacctgcactggtccctgtctcacctgcgtgcggccgtgagccgcggactc
cacccgcggcaggaccactgcagcatctgcctgcagcagtacaagcgtcggcaggaggcc
caggacgagatcattatcttcagctgtggtcatctctaccactgccagtgcctgcagaat
aaggagtgtggggtagcgggggagaggctacacaggtggagctgctacaagtgcacgtcc
agccagggcgggcgaggtggagagaggaacgcctcaagcggggggcggagccgcagcacg
tctctcgctcagactaaagtcacttcagctcgtcgaggttcctggggagaccctactggg
aaaaagttgtttatggataccacactggatgcccagcagagccagtcgtgggagcagctg
agatgtatctacagaggtccctccaggttggcgatcctcaccgaactctcccattcccgc
ggcaacgagaagcccagcctcctgaacccttcacagcccggctccgggagcattttccac
agcgaaaacttccagctcaaactctccccgcctccgctcatcgaggagtag
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