Conger conger (European conger): 133124555
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Entry
133124555 CDS
T10633
Name
(RefSeq) polyadenylate-binding protein 1A-like
KO
K13126
polyadenylate-binding protein
Organism
ccog Conger conger (European conger)
Pathway
ccog03015
mRNA surveillance pathway
ccog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133124555
09123 Folding, sorting and degradation
03018 RNA degradation
133124555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133124555
03041 Spliceosome [BR:
ccog03041
]
133124555
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133124555
mRNA cycle factors
Stress granule specific factors
133124555
Spliceosome [BR:
ccog03041
]
Complex C
Other components
Complex C specific factors
133124555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RBD_RDR6
RRM_occluded
UPF0524
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
133124555
NCBI-ProteinID:
XP_061091842
LinkDB
All DBs
Position
1:complement(49877607..49887029)
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AA seq
634 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGDDMDDEKLRDFFGKYGPALSIRVMTDDSGKSKGFGFVSFER
HEDAQKAVDDMNGKEMNGKLVYVGRAQKKVERQTELKRRFEQMKQDRMTRYQGVNLYVKN
LDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMATVRAVPNPVINPYQPAPPSGYFMAAIPQAQNRA
AYYPASQLAQLRPTPRWATQGVRPQHFQNMPNTMRPSGPRPQTFSTMRPTASQVPRMMTS
QRVAAQTMGPRPSGAAAVAAAPVRGIPQYKYATGVRNPQQHLNTQPQVALQQPAVHVQGQ
EPLTASMLAAAQPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPES
LRSKVDEAVAVLQAHQAKEAAQKSVPNATGVPSV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaagtgctcccagttacccgatggcctccttgtatgtcggggatcttcaccaa
gatgtcaccgaagccatgctgtacgagaaatttagccccgctgggcccatcttgtctatc
cgggtgtgcagagatatgatcactcggcgttccctcggatatgcctatgtcaattttcaa
cagccagccgatgctgagcgtgctctggacacaatgaattttgatgtaatcaagggcagg
cccgtccgcatcatgtggtctcagcgcgacccctccctgaggaagagtggagtgggcaac
atattcatcaagaatctcgacaaatccattgacaacaaggctctctatgataccttctct
gcctttggcaacatcttgtcctgtaaggtggtttgtgatgagaatggctcaaagggctat
ggctttgtgcactttgagacccaggaggctgccgagagagccattgagaaaatgaacggc
atgttgctcaatgacagaaaagtgttcgtcgggcgcttcaagtcccgcaaagagcgtgaa
gccgagctcggcgcccgggccaaagagttcacaaatgtctacatcaaaaactttggggac
gacatggatgacgagaagctaagagacttctttggcaaatacgggccagccctgagcatt
agggtcatgaccgacgacagtggcaaatccaagggcttcgggtttgtcagctttgagagg
cacgaagatgcgcagaaggctgtggatgacatgaacgggaaggagatgaacggcaagctg
gtgtacgtgggccgcgcgcagaagaaggtggagcggcagacggagctgaagcgcaggttt
gagcagatgaagcaggaccgcatgacccgctaccagggggtcaatctgtacgtgaagaac
ctggacgacggtcttgatgacgaacggctgcggaaggagttctcgcccttcggaaccatc
accagtgctaaggtgatgatggagggcggccgcagcaagggcttcggcttcgtgtgcttc
tcatcgccggaggaggccaccaaggcggtgacggagatgaacgggcgcatcgtggccacc
aagccgctgtacgtggccctggcccagcgcaaggaggagcggcaggcccacctcaccaac
cagtacatgcagaggatggccaccgtgcgcgccgtgcccaaccccgtcatcaacccctac
cagcccgccccgccctccggatacttcatggccgccatcccgcaggcacagaatcgtgca
gcgtactaccctgccagccagctggcacagctgagacccaccccccgctgggctacccag
ggagtgagaccccagcatttccagaacatgcccaataccatgcggccctcgggcccccga
ccccagacattcagcaccatgaggccgaccgcctcccaggtgccccgcatgatgacctcc
cagagagtcgccgcccagacgatggggccccggccctccggcgcagctgccgtggcggcg
gcccccgtgcgcggcatcccccagtacaagtacgccaccggggtgcgcaaccctcagcag
cacctcaacacacagccccaggtggccctgcagcagcctgccgtccacgtgcagggccag
gagcccctcaccgcctccatgctggcagctgcacagcctcaggagcagaagcagatgctc
ggcgagcggctcttccccctcatccagaacatgcaccccagcctggcaggaaagatcaca
ggcatgctgctggagatcgacaactccgagctcctccacatgctggagtctcccgagtcc
ctccgctccaaggtggatgaagccgtcgctgtgctgcaggcccaccaggccaaggaggcc
gcccagaaatctgtgcccaacgccaccggcgttccaagtgtctga
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