Conger conger (European conger): 133124696
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Entry
133124696 CDS
T10633
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ccog Conger conger (European conger)
Pathway
ccog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133124696 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133124696 (bard1)
04121 Ubiquitin system [BR:
ccog04121
]
133124696 (bard1)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133124696 (bard1)
03400 DNA repair and recombination proteins [BR:
ccog03400
]
133124696 (bard1)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
133124696 (bard1)
Ubiquitin system [BR:
ccog04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133124696 (bard1)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
133124696 (bard1)
DNA repair and recombination proteins [BR:
ccog03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
133124696 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
zf-RING_6
Ank_4
Ank_5
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
PTCB-BRCT
YxzE
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
133124696
NCBI-ProteinID:
XP_061092093
LinkDB
All DBs
Position
3:77208100..77235838
Genome browser
AA seq
805 aa
AA seq
DB search
MDHGSDVDQKTCAWTKTRQAVAQFRDLLLCAKCSKLMSEPVCFGACEHMFCRTCAGVQIR
DGCCICHSPAWVRDIQVNRQLNNITQLFHDLDCLLNPRELSATPPAGSPVRPDDAALRRP
GKNVKIWFSPRSRKVRCQVERAGECAPQGRGPGKEEAAPREPPARDLSVYNFNSSSQDSG
SSPRRGGGGDGGGGRKRAARGKRKRPQSSPRPATRGRTQTAVRREKLAAINKEWGFGCPE
ERTVAGEGGRGGGEEEEEEEEEEEEEEEVRSKRRPSRKVSFRIAGAPPGGLDVPQQRDPP
TPNGGVSEAGSASAGEPVPVQKQNQNQNQNLSPPAAKTAVPAVLSPKPTTPPPPSSSARR
ASKRALPPGGAQPESTPKRRRSSPGQGRRPGAPAPPSACPSPDFESPVRRSAKDPGTPLG
SPRTPGRGSPAGPGLLRGSPAYLKRNHKGETPLHLAAIKGNVEAVGELLDQGADPNLKDH
AGWTPLHEACNLGHPGVVEALLLKGALLNTPGYHNDSPLHDAVRNGHVTVVRLLLEQGAS
RDVLNMFGLRPADYAETEEMRAILQAPSEGPHTLDTPLSPNTSLSKVTGGSWRDGPVAFL
GSKLTSPQRKRLTKLGRLLGARGVDSFSSSVTHVVVPEGPIPTTLSCLRGVLNGCWVLRF
SWVEACLKSEDWADESEFEAGEGPQRSRLNRDNLLPRLFDGCFFFLLGPFKSPSREELLQ
LVREGGGQVLTRQPKPDSDVTQTLTAAAYHARPGSDQSLSTQYILYHAQSSHRPPRVRLG
KVWSAPTSWLLDCIVAFQLLPVPEL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggatcacggttctgatgtcgatcaaaaaacctgcgcctggaccaaaactcgacaggca
gtcgcccagttccgagaccttttgctctgcgcgaaatgttcgaagcttatgagcgaacca
gtctgcttcggagcttgtgaacacatgttttgcaggacctgtgcaggggtacaaatacga
gacggctgctgtatctgtcatagcccggcttgggtgagagatattcaggtcaacagacag
ctcaacaacatcacacagctcttccatgacctggactgtctgctgaaccctagggagctc
tcagccaccccgcccgccggctcccccgtgcggcccgatgacgccgctctccgaaggccc
gggaagaacgtgaagatctggttcagcccccgcagcaggaaggtgcgctgtcaggtggag
agggccggcgagtgcgccccccagggccgggggcccgggaaagaagaagcggcccctcgg
gagcccccggcccgagacctgtccgtctacaacttcaactcctcctcccaggactcgggg
agctctccgcggcgcggcggaggcggagacggaggaggcgggaggaagcgggcggcgcgg
gggaagaggaaacgccctcagagcagcccgaggccggccacgcgcgggcggacccagacg
gccgtcaggagggagaagctggccgccattaacaaggagtggggcttcggctgcccggag
gagcgcaccgtcgccggggagggcgggcggggtggcggagaggaggaggaggaggaggag
gaggaggaggaggaggaggaggaggtccggagcaaacgccggcccagcaggaaggtgtcc
ttccggattgctggggctccccctggtggcctggatgttccccagcagcgggatccgccg
accccgaacgggggtgtttcagaggcgggctcggctagtgcgggggagcctgtgcccgtc
cagaagcagaaccagaaccagaaccagaacctgagccccccggcggcgaagacggccgtc
ccggccgtgctctcgcctaaaccgacgacaccgccgccgccgtcgtcctcagcccgtcga
gcctccaagagagccctgccaccggggggcgcccaacccgagagcacccccaagagacgc
aggtcttccccgggccaagggaggcgtccgggggcccccgccccgccctccgcctgtccc
agccctgattttgagagccctgtccggcggtccgcaaaggacccggggacccccttaggc
tcccctcggaccccagggaggggctccccggctgggcctgggctgctccggggcagccct
gcttacctgaagaggaaccataaaggggagacgcctctgcacctggccgccattaagggg
aacgtggaggcggtgggggagcttctggaccagggagccgaccccaacctgaaagaccat
gctggctggacccccctgcacgaggcctgcaacctgggacacccgggtgtagtggaggcg
ctgctcctgaagggggcgctgctgaacacgccgggttaccataacgactcgccgctgcac
gacgcggtcaggaacggtcacgtgaccgtggtccggctgctgctggagcagggcgcctcc
cgggacgtgctgaacatgtttggactgcgcccagcggactacgcagaaacggaagaaatg
cgggcaattcttcaggcaccttctgaaggaccccacaccctcgacaccccactcagcccg
aacacgagcctaagcaaggtgacggggggctcatggagagacgggccggtggcgttcctg
ggctctaagctgacctcgccccagcggaagcggctgaccaaactgggccggctcctcggg
gcccggggtgtcgactccttctcctcctcagtgacccacgtagtggttccggagggcccg
atccccaccaccctgtcctgtctccgaggggtcctgaacggctgctgggtcctgcgcttc
tcttgggtggaggcgtgtctgaagtcggaggactgggcggacgagagcgagttcgaagcg
ggggagggtccccagcggagccgtctcaaccgtgacaacctgctccctcggctgtttgac
gggtgcttcttcttcctgctgggcccctttaagagcccctccagggaggagctgctccag
ctggttagagagggtggggggcaggttctgacccgccagcccaaacccgacagcgacgtg
acccagaccctcaccgcggccgcctaccacgcccggcccggctccgaccaatccctgagc
acccagtacatcctctaccacgcccagagctcccacaggcccccgagggtccgcctgggc
aaggtgtggtccgcccccacctcctggctcctggactgcatcgtcgccttccagctcctc
ccggtgcccgagctctag
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