Conger conger (European conger): 133125185
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Entry
133125185 CDS
T10633
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
ccog Conger conger (European conger)
Pathway
ccog03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
133125185 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccog01009
]
133125185 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccog04515
]
133125185 (pcdh11)
Protein phosphatases and associated proteins [BR:
ccog01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133125185 (pcdh11)
Cell adhesion molecules [BR:
ccog04515
]
Cadherins
Protocadherins
133125185 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
133125185
NCBI-ProteinID:
XP_061092925
LinkDB
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Position
3:25581448..25852816
Genome browser
AA seq
1227 aa
AA seq
DB search
MDLACEAHLLVVLITCLALQSWAQEKDYTVREELSENVRIGNLRKDLDLALDPSVKLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTSNRIDREKLCSGIFNEKRCFYELEVAVLPDEIF
RLVKIRFLIEDINDNAPLFQSTVINISIPENTAVNSRYPVPSAVDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGTPPKSSTAILQVTIS
DVNDNRPVFKESEIEVNIPENAPVGTSVTQLHATDADLGSNAQIHFSFSNQISATTKRLF
TIDSNTGLITIRQPLDREMTPVHKLIVLASDGSSTPSRATVTVNITDINDNVPSIDTRYI
MNPINGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFDNQFLLET
AAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGRNAEITYSLGPDPPEGFNIDRRSGILSVGKRLDREKQEKYAFTV
IARDNGSPALQNNVTVKVMVQDINDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVVTLSILNGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDGGRPQSTSFAKVT
INVVDVNDNRPVFVIPSSNYSYDLVQSTTSPGSVVTRVYAIDNDTGMNAELQYSIIGGSQ
RGLFAIDKTTGNITLQEKIVAADQGLHRLVVQVKDLGQPESLHAIALVHLFVNETVSNAS
FIQEQLRRSMETPLDRNVGDTEVTPQANGYVIVVIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKGKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPTHEHING
TLDLPVELEEQTMGKYNWATTPSTFKPDSPDLAKHYKSASPQPTFQIKPETPVAPKKHHV
IQELPLDNTFVVGCDTLSKCSSSSSDPYSVSECSCQGGFKAAGQIHTRQNQSQTPDKTFS
SAPPTCPHKQTQRRVTFHLPDGSQESCSDSGLGDQEPSSSTSTTQPLPLGFTQEEYYEQT
SPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGHSDSCWMPPALTQFQPSNN
TTVSTFSFQQAWARGAKLDGRHTLGRSVPKDDLDKGSNRPQFYNTLERHCVKKEDPVKVI
PLANFNPSAQQTTATGNTAVFVHEHQL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcctgtgaggcacacctgctggtggtcctgatcacctgcctggccttacag
tcctgggcccaggagaaggactacacagtgcgggaggagctgtctgagaacgtacgcatc
ggaaacctgcgcaaggacctggacctggccctggaccccagcgttaagttgtcttctccg
ctgcagttcaagcccgtctacaagaccggcgacgtgcctttggtgcgtgtggaggccaac
acgggagagattttcaccacctccaaccgcatcgaccgcgagaagctctgctcgggcatc
ttcaacgagaagcgctgtttctacgagctggaggtggccgtgctgcccgacgagatcttc
cgcctggtgaagatccgcttcctcatcgaggacatcaacgacaacgcgcccttgttccaa
tccaccgtcatcaacatctccatcccggagaacacggccgttaattcccgctaccccgtc
ccgtctgctgtggacccagatgtggggatcaatgggattcagcactacgaacttgtgaag
agtgtcagcgaatttggactggatatcatcgagaccccggagggggacaaatggccgcag
ctcatcgtccagcagaacttagaccgtgaacagaaggacacctttgtgatgaagatcaaa
gtggaagacggagggactcccccgaagtccagcactgccatcctacaggtcaccatctct
gatgtaaatgacaacaggccggtgttcaaggagagtgagattgaagtgaacattccagaa
aatgcccccgtgggcacgtcagtcacccagctccatgcaacggatgctgacctaggctcc
aatgcacagatccacttctccttcagcaaccagatatccgcaactaccaaacggctcttt
acaatcgacagcaacactggcctgatcacaattaggcagccactggacagggagatgact
ccggttcacaagctcatcgtcctggctagtgatggaagctccacaccatcgcgggcgaca
gtgacggtcaacatcacggacattaatgacaacgtgccgtccatagacacccgttacatc
atgaaccccattaatggtaccgtcctgctgtctgaaaacgccccccttaacactaaaata
gccctgattaccgtgacagacagggacgctgatctgaacgggaaagtgacttgctacact
gaccatgatgttccctttaggctgaagcccgtgtttgacaaccagtttctgctagaaacg
gctgctcctctagattatgagacgaccagagaatatgcgattaagattgtggcctcggat
tcaggaaagccccccctgaacacttcagctatggtcctcataaagataaaagatgaaaat
gacaatgctcccatctttcctcagcctgaaattcagctgtccatcccagagaacaatgac
ccttcgacgcagctgataaaaatcagcgccacagatgcggacagtggccggaatgccgaa
ataacttattccctgggccctgacccacctgaaggctttaacatcgatcggcggtcagga
atcctttctgtcgggaaaaggcttgacagggaaaagcaggagaagtatgcattcactgtc
attgcccgggataatggctcccctgctctacagaataatgtgacggtgaaggtgatggtc
caggacattaacgacaatagcccagccttcactcaccccgagtataacttttacgtgcct
gaaaacctgcccctgtatggtactgtgggcttaatcacagtcacggacgcagatgccggt
gacaacgcggtggtcaccctctccattctgaatggcaaagacaatttcataattgatcca
aaaaccggcgtgataaaaccaaacattacatttgacagggagcagcagagttcctacacc
tttgtggtgaaggcagtggatggcggtaggccgcagagcacctctttcgctaaagtcacg
ataaatgttgttgatgtgaatgacaatcgacctgtgtttgtcataccttcgtccaactac
tcctacgacctggtccagtccaccaccagccctgggtctgtggtgacaagagtctatgcc
atagacaatgacacaggtatgaatgcagaactacaatacagcattattggtggatctcaa
aggggcctgtttgccatagataaaacgaccggtaacatcacgctgcaggagaagattgtt
gctgctgatcaaggcttacacaggttggtggtgcaggtcaaagacctgggacagccggag
tccttgcatgcaattgccctcgtccacttgttcgtgaatgagactgtgtccaatgcttct
ttcatccaagagcagctacgccggagcatggagaccccgttggaccgcaacgttggggac
actgaggtcacaccccaggctaacggctatgtcattgtggtcatcgccatcatcgcaggc
acaatgaccgtcatcctggtcattttcgtgaccgccctggtgcgctgccgccagacgccc
aggcacaaggtggtccagaagggtaagcagagcggcgagtgggtgtcacccaaccaggag
aaccggcagatcaaaaagaagaagaagaaaaagaagaggtcgcccaagagtctgctgctg
aacttcgtgaccatcgaagagtcaaagccagacgaccccacccacgagcacatcaacggc
accctggacctcccggtggagcttgaggagcagacgatggggaagtacaactgggccacc
actccatccaccttcaaaccagacagtccagacttggcgaagcactacaagtctgcttct
cctcagcctaccttccagataaaaccagagaccccagtcgcacccaagaagcaccatgtc
atccaggagctgcccttggacaatacctttgtggtgggctgtgacacactttccaagtgc
tcctccagcagctccgacccctacagtgtgtctgagtgcagctgtcaggggggcttcaag
gcggctgggcaaatccacacccgacagaatcagagccagacccctgacaagacattcagc
tcagctccacccacatgtccacataagcagacgcagcgccgcgtgacctttcacctcccg
gacggctctcaggagagctgcagtgacagcgggttgggtgaccaggagcccagtagcagc
accagcaccacccagcctctgcccctgggcttcacacaagaggagtattacgagcagacc
tcccccaacagtcgcaccgaaggagacgggaactcagaccccgagtccaccattgaagtt
aacctgcagaaagccctagctgaagcttcggaaacctgcactcaggaatgcttgattctg
ggccactccgacagctgttggatgcctccagcattgacccagttccagccatccaacaac
accacagtgtccaccttcagcttccagcaggcttgggcccgtggtgccaagctagacggg
cgtcacaccctcggcaggtcggtgcccaaagacgatcttgacaaggggagcaatcggccg
cagttctacaacacgctggagagacactgcgtaaagaaggaggatccagtcaaggtcatt
cctctggccaatttcaacccgtctgcccagcagacaacagccactgggaacactgcagtc
tttgtccatgagcatcagctataa
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integrated database retrieval system
