Conger conger (European conger): 133125238
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Entry
133125238 CDS
T10633
Symbol
itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
ccog Conger conger (European conger)
Pathway
ccog04145
Phagosome
ccog04148
Efferocytosis
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04810
Regulation of actin cytoskeleton
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133125238 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133125238 (itgb5)
04148 Efferocytosis
133125238 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
133125238 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133125238 (itgb5)
04810 Regulation of actin cytoskeleton
133125238 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133125238 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccog04515
]
133125238 (itgb5)
Membrane trafficking [BR:
ccog04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
133125238 (itgb5)
Cell adhesion molecules [BR:
ccog04515
]
Integrins
Integrin beta subunits
133125238 (itgb5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
133125238
NCBI-ProteinID:
XP_061092987
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Position
3:80618594..80674900
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AA seq
805 aa
AA seq
DB search
MLSRRQWTYTVLSYLILEILIRNVKGLNVCTSGSATSCEECLLIHPSCAWCAQEEFGAPR
TLTSRCDLLQNLQKRGCEARSVESPRSDSTVLENQPLSSKGSGPTQYDVIQIMPQKVSLS
LRPGDPTWFEVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAQEMKKLTSNFRL
GFGSFVDKNMSPFSYTAAKYQSNPCNGYKLFPNCVPSFGFRHLLSLTDKVDMFNKEVQKQ
MVSRNRDAPEGGFDAILQAAVCKESIGWRKEAFHLLVFTTDDVPHLALDGKLGGLVQPHD
GMCHLDEKNEYSASTRMDYPSLALLGEKLAENNIYLIFAVTKKLYVIYKNFTALIPGTTV
EILDQDSKNIIQLIVNAYNNIRSKVELTVWDHPEDISLSFTATCQDGRPLTGLRKCADLK
IGDTVSFNVSVEARGCPSPDRPQSFTIKPVGFKDRLQALVTYRCDCGCTRHTQPASGRCS
GAGTHTCGTCACEPGYLGTRCECREGDAGSTHLAACRQAEGKQVCSGRGQCRCNQCLCYE
SEFGKIYGSYCECDDFSCARHKGLLCSGHGECHCGECKCHAGYIGDNCNCSTETAPCVSE
DGRMCSGRGVCVCGGCQCTEPGAFGDTCEKCPTCPDACGTKRECVECRLFGSGKLADNQT
CQRLCKDEIVTVETLKSDDPNAVLCLYKTDSDCVMKFTYSEHANGQSVLTALKEPECAAA
PDALTVLLAVVGSILAVGVALLAVWKLVITVHDRREFARFQSARSRARYEMASNPLYKQR
MSSHAAETVFSMNSLNSKSYNGAVH
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcagaaggcaatggacatacacggtgcttagctatcttatcttagaaatatta
attcgcaatgttaaaggtctcaacgtgtgcacgagcggcagcgcgacctcctgcgaggaa
tgtctacttatccacccgagctgcgcctggtgcgcgcaagaggaattcggggctccccgg
accctgacgtcgcggtgcgacctgcttcagaacctgcagaagcgcggctgcgaggcccgg
tccgtcgagagtccacgcagcgactccaccgtcctggagaaccagccgctcagctccaag
ggctccggcccgacccagtacgacgtcatccagatcatgccccagaaggtgtctctgagt
ctccggcccggtgacccgacgtggttcgaggtgcaggtgcggcaggtggaggactacccc
gtggacttgtactacctgatggacctgtccctgtccatgaaggacgacctggacaccatc
cgcaacctgggcaccaagctggcccaggagatgaagaagctgaccagcaacttccggctg
gggttcggctccttcgtggacaagaacatgtcgcccttctcctacaccgccgccaagtac
cagagcaacccctgcaacgggtataagctcttcccgaactgcgtgccctccttcgggttc
cggcacctcctctccctgacggacaaggtggacatgttcaacaaggaggtgcagaagcag
atggtgtcccgtaaccgtgacgcccccgagggcgggttcgacgccatcctgcaggcggcc
gtgtgcaaggagagcatcggctggaggaaggaggccttccacctgctggtgttcaccacg
gacgacgtcccgcacctggccctggacgggaagctggggggcctggtgcagccgcacgac
gggatgtgccacctggacgagaagaacgagtacagcgcctccaccaggatggactatccc
tctctggccctgcttggtgagaagctggcggagaacaacatctatctcatcttcgccgtg
accaagaagctctacgttatttacaagaacttcacggcactcatacctggtacgacggtg
gagatcctggaccaggactcgaagaacatcatccagctgatcgtgaacgcgtacaataac
atccggtccaaggtggagctgacggtgtgggaccacccggaggacatcagcctgtcgttc
accgccacgtgccaggacggccgcccgctgaccggcctgcggaagtgcgccgacctcaag
atcggggacacggtgtccttcaacgtgagcgtggaggcgcggggctgcccctcgccggac
cggccccagagcttcaccatcaagcccgtgggcttcaaggaccggctgcaggcgctggtg
acgtaccgctgcgactgcggctgcacccggcacacgcagccggccagcgggcgctgcagc
ggggcgggcacgcacacctgcggcacgtgcgcctgcgagccgggctacctgggcacgcgc
tgcgagtgccgcgagggcgacgccgggagcacgcacctggccgcctgccgccaggccgag
ggcaagcaggtgtgcagcgggcgcggccagtgccgctgcaaccagtgcctctgctacgag
tcggagttcggcaagatctacgggtcctactgcgagtgcgacgacttctcctgcgcccga
cacaagggcctcctctgctccggtcacggggagtgccactgcggtgagtgtaagtgccat
gccggctacatcggggataactgcaactgctccacggagacggcgccctgcgtgtcggag
gacggccggatgtgcagcgggcggggcgtgtgcgtgtgcgggggctgccagtgcacggag
cccggggccttcggggacacctgcgagaagtgccccacctgccccgacgcctgtggcacc
aagagggagtgcgtggagtgccggctctttggctcggggaaactcgccgacaaccagacc
tgccaacggctctgcaaggacgagatcgtcaccgtggaaacgctgaagtcagatgacccg
aacgcggtcctgtgtctctataagacggacagtgactgcgtgatgaagttcacttactca
gagcacgccaacggccaatccgtgctcaccgccctgaaagaaccagagtgtgctgcggct
ccagacgccctcactgtgctcctggcggtggtgggcagtatcctggcggtgggcgtggct
ctgctggccgtgtggaagctggtcatcaccgtgcacgaccgccgggagttcgcccgcttc
cagagcgcccggtcccgcgcgcgctacgagatggcctcgaaccccctgtacaagcagcgg
atgtccagccacgcggcggagaccgtcttcagcatgaacagtctgaacagcaagtcctac
aacggagcggtccactga
DBGET
integrated database retrieval system