Conger conger (European conger): 133126201
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Entry
133126201 CDS
T10633
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ccog Conger conger (European conger)
Brite
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133126201 (dicer1)
microRNA pathway
RISC loading complex
133126201 (dicer1)
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GFIT
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NCBI-GeneID:
133126201
NCBI-ProteinID:
XP_061094139
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Position
1:13349753..13379067
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AA seq
1880 aa
AA seq
DB search
MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLTKELSHQIRGDFRECGRRTIFLVNAASSVIQQAATVRTHSDLQVGEYTSLENT
SSWTEEKWNQEMIENQVLVMTCHLFLHVLKKRVLPLSKINLLVFDECHLAIMDHPYREIM
KVCEGCPSSPRILGLTASILNGKCDPSELEEKIQNLERILRSTAETATDLVVLDRYASQP
REVVLDCGPYLDKSGLCERLLNELDEALGFLHDCNVSAHREDRDPTFISKQVLSDCRAVL
TVLGPWCADKVAGIMVRELQKYIKHEQEDLNRKFLLFTDTILRKVHALCEEHFSPASLDL
KFVTPKVIRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEIEVKEKP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADTERTKAFEEDLKTYKAIEKILRNKCSKSPESSEFEPVEPVLDDDN
ILPPYVLRSEDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCKTAQQPDGAYRSTLYL
PINSPLRVPVTGPSMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLH
DEEETSVPGRPGSTKRRQCYPKAIPECLRNSYPVPEQSYYLYVIGMVLTTPLPDELNFRR
RKLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLSAPQLELITRL
HQYIFSHILRLEKPALEFKPTQADSAYCVLPLNVVEDSNTLDLDFKFMEDIEKSEARIGI
PNTQYTKQNPFTFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFA
EYYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQN
KQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGVQTLPPDF
RYPNLDFGWKKSIDSKAFISSPSSCTEDDYCKHSTTVAPEDAAHQGFHPEASSPHGGAIA
CVNCDPAGEDPEPASLPGEKHGLTRGPDLANGTADDTSDLGGRDHCQCSPLDSPKSEISV
QSTTSVHVQHSRSTENQPQPSIECTPGSNSHFDGHTTKPTSDCRQVVDVTTGSAPSDVSK
AAVAPPSGDSPKTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYP
DAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSCTDK
WDSETKGDPLANGRAEEDYEEDEEEGDDVEEDEELMWKEPKDEVNMEDDLEYYQEHINFI
DNMLIGSGAFGKKISLNAFPPAEPSYEWKAPKKPNLPNAHFAADGDEFDYSSWDAMCYLD
PSKAGEEDDFVVGFWNPSEENCGTDTGKQSISYDLHTEQCIADKSIADCVEALLGCYLTS
CGERAAQMFLCSLGLKVLPAVKRGPGDEAGRSKELQYGWLKIPPRCMFDHPDAESTLNHL
ISGFENFEEKISYTFQNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYE
DPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEM
QGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSRMSLETVWQVYYPMMRPLI
EKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKS
AAARRALRSLKANQPQVPNS
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggcaggactacagctcgtgacccccgcttcctcgcccatgggacccttcttcggtctc
ccatggcaacaggaggccatccatgacaatatttacacaccaaggaaatatcaggttgaa
cttcttgaagcagctctggaacacaatactatcgtttgtttaaatactggctcagggaag
acctttattgcagtactcctcacaaaagagctctcccatcaaatccggggagacttcaga
gaatgtgggaggaggaccattttcttggtgaacgcagcatcgtctgtgatccagcaagca
gctactgtccggacccattcggacctgcaagtgggggagtataccagcctagagaacaca
tcgtcatggacggaggagaagtggaaccaggaaatgatcgaaaaccaggtgcttgttatg
acatgccacctctttctgcacgttctgaagaaacgagtcttgccactatcaaaaatcaac
ctgctggtgtttgatgagtgtcaccttgcaatcatggatcatccctatcgggaaataatg
aaggtttgtgaggggtgtccgagcagtcctcggatcctgggtctgacggcctccatttta
aacggcaaatgtgacccgtcggagctggaggagaagatccagaacctggagaggatcttg
agaagcaccgcagagactgctactgacctcgtcgtcttggataggtatgcctcacagcct
cgtgaagtggtgctggactgcgggccctacttggataagagtgggctctgtgagcgtctc
ctgaacgagctggatgaagctctgggctttctccacgactgcaacgtatccgcccaccgc
gaggacagggaccccacgttcatctccaagcaggtgctgagcgattgccgagcggtgctc
accgtgctggggccctggtgcgcggacaaggtggcgggtatcatggtgcgggagctgcag
aagtacatcaagcacgagcaggaggacctgaaccgcaagttcctgctgtttacagacact
atcctgcgaaaagtccacgcgctctgcgaagagcacttctcgccggcgtccctggacctc
aagttcgtgacgcccaaggtgatcaggctgctggagatcctgcacgagtacaagcccttc
gagaggcagcagttcgagagcgtggagtggtacaacaaccgcaaccaggacaactacgtc
tcctggagcgactcggaggacgaggacgaggacgaggagatcgaggtgaaggagaagccc
gaggccaacttcccctcgccattcacaaacatactgtgcggcatcatttttgtggagaga
cggtacacggcggtggtcttaaacaggcttataaaggaggcaggaaagcaggaccctgaa
cttgcctacattagcagcaacttcattaccgggcacagcattggcaagaaccagcctcga
aacaagcagatggaggttgagtttcgtaaacaggaggaggttcttcggaaatttcgtgcc
cacgagaccaacttgctcattgcgaccagtattgtggaggagggagttgatattccaaag
tgcaatttggtggttcgatttgacttgccgacggagtaccgctcgtatgttcagtccaaa
gggagggctcgagcgccggtgtccaattacattatgctggctgacaccgagagaacaaaa
gcatttgaagaggacctaaaaacatacaaggcaatcgaaaagatcctgaggaacaaatgc
tcaaagtcgccagagagcagcgagttcgagcctgtggagccagtcctggacgacgacaat
atcttacctccctacgtgctgcgctctgaagacggaggccccagggtcaccatcaacacg
gccatcggccacgtcaacagatactgtgcgaggctacccagcgacccgttcacacacctg
gcccccaagtgcaagactgcgcagcaaccggacggagcttatagatccacgctctatctt
cccattaactcccctctcagagttccagtcactgggccctcaatgaactgtgcaagacta
gctgagaaagcagttgctcttctttgctgtgaaaagctacacaaaataggtgaattagat
gaccatttgatgccagtggggaaggagactgtaaaatatgaggaagagctggatttgcac
gatgaagaggagaccagcgtgccaggcagaccagggtcaaccaagaggaggcagtgctac
ccaaaagccatcccagaatgtcttcggaacagctaccctgtgccagagcagtcctactac
ctgtacgtgatcgggatggtgctgacgacccctctacctgacgagctcaacttccggagg
aggaagctctaccctcctgaagacaccaccagatgcttcggcatcctgacggcaaaacca
atacctcggattccccacttcccggtgtacacgcgctcgggcgaggtgaccatctccatc
gagctgcagaagtcgggcttcaccctcagcgcgccccagctggagctgatcacccgcctg
caccagtacatcttctcccacatcctccgcctggagaaacctgcactggagttcaaaccc
acccaggccgactccgcctactgcgtcctacctctcaacgtggtggaggattccaacact
ttagacttggactttaaattcatggaagatattgaaaaatctgaagcgcgtataggcatt
ccgaacacccagtacaccaaacagaacccgtttactttcaaattggaggactaccaggat
gctgtcatcattccaaggtatcgcaactttgaccagcctcatcgcttctatgtagcagac
gtctacactgatctcacaccactcagtaaattcccttcgccagaatatgaaacctttgcc
gaatactacaagaccaagtataacctcgacctctccaacctgaaccagccactgctggat
gtggaccacacatcctcaagactaaaccttttaactcctcggcaccttaaccagaaagga
aaagcgcttcctctcagcagtgctgagaagcggaaggccaaatgggagagcctgcaaaac
aaacagattttggttcctgaactgtgtgccatccacccgatccctgcctctttgtggaga
aaagcggtctgccttcccagcatcctctaccgacttcactgccttctgacggccgaggaa
ctccgatctcagacggccattgacgccggtgtgggggtccaaaccctgccgccagacttc
agatacccaaatttggatttcgggtggaagaaatccatcgacagcaaggctttcatctca
agtcccagctcctgcacggaagacgattactgtaagcacagcacaactgtagcccctgaa
gatgctgcccatcaaggttttcatcctgaggcctcctcaccacacgggggcgccattgca
tgtgtgaactgtgaccctgccggtgaggatccggagcctgcctcgctccccggagagaag
cacggcctcacccggggcccggacctcgctaacggcacggcggacgacaccagcgacctc
ggcggacgcgaccattgccaatgttccccgctcgactcgcccaagagcgaaatatctgta
caaagcactacctcagttcacgtgcagcactctcggagcactgagaaccagccccagccc
agcattgaatgtactccagggagcaactcacactttgacggacacacgacaaaacctacc
tcagattgtcgccaggtggtcgatgtgacaaccggttcggcaccttcagacgtttcgaaa
gcggcggtcgccccgcccagcggcgactccccgaaaaccctgggccccaaccccggcctc
atcctgcaggccctgacgctctccaacgccagcgacggtttcaacctggagagacttgag
atgctcggcgactccttcctcaagcacgccatcaccacctacctgttctgcacctacccc
gacgcccacgaggggcgtctctcctacatgaggagcaagaaggttagcaactgtaacctc
tatcgtttggggaaaaagaaaggcctgccaagtcgaatggtggtctccatctttgatcct
ccagtgaactggttgccccctggatatgtagttaaccaggacaaaagctgtactgacaag
tgggactccgagacaaaaggggaccccctggccaacggcagagccgaggaagactacgaa
gaggacgaagaggagggagacgatgtggaggaggacgaggagctgatgtggaaggagccc
aaggacgaggtgaacatggaggacgacctggagtactaccaggagcacatcaacttcatc
gacaacatgctgatcggctcgggcgccttcggcaagaagatctccctgaacgccttccct
ccggccgagcccagctacgagtggaaggcgcccaagaagcccaacctccccaacgcgcac
ttcgccgccgacggagacgaattcgactacagctcctgggacgccatgtgctacctggac
cccagcaaggcgggggaggaggacgactttgtggtgggcttctggaacccctcggaggag
aactgcggcacggacacgggcaagcagtccatctcctacgacctgcacacggagcagtgc
atcgcagacaagagcatcgccgactgcgtggaggccctgctgggctgctacctcaccagc
tgcggggagcgtgccgcccagatgttcctctgctcgctgggcctcaaggtgctgccggcg
gtgaagaggggccccggagacgaggcgggccgctccaaagagctgcagtacggctggctc
aagatcccgccgcgatgcatgttcgaccacccggacgccgagagcacgctcaaccacctc
atctccggcttcgagaacttcgaggagaagatcagctacacctttcagaacaaggcctac
cttctgcaggccttcactcacgcttcgtaccattacaacaccattacagattgttaccaa
cggttggagtttcttggcgatgcaattttagactacctcataactaagcacctttatgaa
gacccgcggcagcattcacctggcgtcctgaccgacctgcggtccgccctggtcaacaac
accatattcgcctctctggccgtcaagtacgattaccacaagtacttcaaggccgtctcg
cccgagctgttccacgtgatcgacgactttgtgcaatttcaactggaaaagaacgaaatg
caagggatggattctgagcttcgccgctctgaagaagatgaagagaaagaagaggacatt
gaagttcccaaagcaatgggagacatctttgaatcacttgctggtgcaatttacatggat
agcaggatgtcactggagaccgtttggcaagtgtattatccaatgatgaggccacttata
gaaaaattctctgctaatgtccctcgctctcctgttcgggaactgctggaaatggaaccg
gagacggccaagttcagccctgcggagaggacgtacgatggcaaggtgcgggtgacggtg
gaggtggtgggaaaggggaagttcaaaggcgtgggccgcagctacagaatcgccaagtct
gccgcagcccggagggctctgcgcagcctcaaggccaatcagcctcaggtcccaaacagc
tga
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integrated database retrieval system