Conger conger (European conger): 133126473
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Entry
133126473 CDS
T10633
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ccog Conger conger (European conger)
Pathway
ccog03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133126473 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccog03041
]
133126473 (prpf38a)
Spliceosome [BR:
ccog03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133126473 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
133126473 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
133126473
NCBI-ProteinID:
XP_061094718
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All DBs
Position
4:complement(18131453..18134911)
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AA seq
309 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGATYMRLTGSSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERVCDVILPRLQKRQVLEEAELLDSR
ISALEEDLDEVETSEEEDEEEEKPERGPSPEPHRRGYRDTDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESRSKKS
HKKSRRGNE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaggactgtgaaagatgctaatagcatacacggtacaaacccacagtattta
gttgagaaaattatacgaacacgcatatatgagtcaaaatactggaaagaggagtgtttc
ggactgacggctgaactggttgtggacaaagcgatggaattgaagtatgttggtggtgtt
tatggagggaacatcaagcctacgccgttcctctgcctgactctgaagatgctacagatc
caacctgaaaaggatatcatcgtggagttcataaaaaacgaggatttcaagtatgtccgt
ctgcttggagccacatacatgagactgactggttcttcagtggactgctacaaatacctt
gaaccgctttacaatgattacagaaaaatcaaaagccagaacagaaatggagaatttgaa
ctgatgcatgtggatgagttcatagatgagttgcttcatgccgaaagagtgtgtgatgtt
atcctgccccggttacagaaacggcaggtcttagaagaggcagagcttctggactcacgt
ataagtgctctggaggaagacttggatgaagtggaaaccagtgaagaggaggatgaagaa
gaggagaagccagagagaggcccgtctccagagccacaccgacgcggttaccgtgacacc
gaccggccgcgtcgttcaccctcaccccgctacagacgcagtcgttcaccaaggaggagg
agcaggtcgccaaaaagacgcagtccctccccaagacgggaacgccaccgcagcaagagc
ccccgcagacaccgcagcaggtccagggaccggcgccaccgctccaaatccccaggtcac
cacagaagtcatcggcatcgcagtcattccaagtctccagaaagcagatcaaagaagagt
cacaagaaaagccgaagaggaaacgaataa
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