Conger conger (European conger): 133126844
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Entry
133126844 CDS
T10633
Name
(RefSeq) collagen alpha-2(I) chain-like
KO
K06236
collagen type I alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133126844
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133126844
09142 Cell motility
04820 Cytoskeleton in muscle cells
133126844
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133126844
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133126844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
133126844
NCBI-ProteinID:
XP_061095255
LinkDB
All DBs
Position
1:66781998..66813761
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AA seq
1349 aa
AA seq
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MLSFVDTRIVLLLAVTSYLATCQSGPYGEKGPRGDTGPQGPDGADGIPGLPGPPGPPGPP
GLGGNFAAQYGAKGPDPGPGPMGMMGSRGAPGPPGSPGSQGFPGHAGEPGEPGQTGPLGA
RGPPGPPGKVGEDGNNGRLGKAGDRGAPGGQGARGFPGTPGLPGMKGHRGYNGLDGRKGE
VGAAGLKGETGARGANGSPGQAGARGLAGERGRVGPAGPAGARGSDGNTGPAGPAGPLGA
AGPPGFSGAPGAKGEIGAVGAPGPQGAQGTRGEPGVNGAVGPAGPAGNPGNNGLAGAKGA
TGAPGIAGAPGLGGARGGPGPQGLTGAAGARGLGGDPGAVGSKGDSGIKGEPGSHGPQGP
LGPAGEEGKRGPTGEVGPTGPIGSRGERGVPGARGLPGVEGRAGPMGMPGARGATGSGGP
RGPPGDAGRAGEPGAVGPRGLPGSSGVGGPPGKEGPMGAPGADGRTGPAGATGARGLAGT
IGFPGPKGPGGAPGKAGDKGATGPAGLRGAPGPDGNNGPAGAIGAVGNTGARGESGPAGS
VGFQGLPGPVGGVGEAGRPGNRGIPGETGQHGPAGAKGERGNPGPAGATGSQGPIGARGA
TGPPGVDGGAGDAGIVGLAGNAGPQGASGMHGERGAAGTPGGKGEKGEAGHRGPEGNLGR
DGARGAAGPSGPPGPSGANGDKGETGAAGAHGPAGPRGSPGERGERGPLGASGFAGAPGS
NGQTGVRGEKGPGGAKGEVGAVGPAGPAGSSGPSGPSGPGGPPGARGDTGPHGLTGFPGP
AGRSGLPGPAGIVGPAGHMGAAGKDGPRGARGDPGPGGPQGSVGMVGPQGVAGEKGAAGQ
AGATGPAGSPGPQGVLGSQGFVGLPGTRGERGLPGGAGVVGEPGRGGPSGQTGPRGPAGN
IGMPGMTGAPGDAGREGSPGNDGPPGRPGAAGIKGDRGEPGSHGVVGSTGSPGAVGPTGS
MGRPGNRGEPGAVGPAGAVGAAGATGAIGAGGLRGEKGVGGDKGDRGMKGLRGFPGMQGM
NGPAGVPGETGAAGSAGPSGPRGPVGPHGPHGKDGRAGPHGPSGPVGHRGPAGHMGPAGP
PGSPGVPGPPGPAGGSYEFGGYDEYRADQGALRAKDYEVDATIKSLNTQIDSILSPEGSR
KNPARTCRDIRLGHPEWTNGFYWIDPNEGCISDAIQAYCDFSTGETCIHAKPASIDRKNW
YKSTEKSHVFFGETINGGSEFTYNDDTISTQSMATQLAFMRLLANRASQNITYHCKNSIA
YMDAEGGDLKKAVRLMGSNDVELRAEGNSRFTYNVLEDGCTRHTGQWAKTVIEYRTTKPT
RLPILDIAPLDIGGDDQEFGLDIGPVCFK
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatactcggattgtgttgctgctcgcagtaacttcataccttgca
acatgtcaatctggtccatacggagaaaaaggccccagaggtgacacgggccctcaggga
ccagatggcgcagatggcattcccggacttcctggccccccagggcccccaggtccccct
ggacttggtggaaactttgctgctcagtatggtgcaaaaggcccagacccaggccctggt
cccatgggtatgatgggaagcaggggcgcacccggacctcctggtagccctggctctcaa
ggattcccaggacacgctggtgagcctggtgaacctggacagactggtcctcttggtgca
cgtggaccccctggaccccctggaaaagttggtgaagatggtaacaatggcagacttggc
aaggctggagatagaggtgcacctggaggacagggtgcccgtggtttccctggaactcct
ggccttccgggcatgaaggggcacagaggctacaatggtctggatggacgcaaaggagag
gtcggagcagctggtctcaagggagagactggtgcacgtggtgccaatggatcacctgga
caggctggggcacgtggtctggcgggggagagagggcgcgttggacctgccggcccagct
ggtgcaagaggaagcgatggaaacacaggccctgctggccctgctggtcctctgggagca
gctggtcctccaggtttctcaggtgcccctggtgctaagggagagattggtgctgttggt
gcccctggcccccagggtgctcaaggtacaagaggtgaacctggtgtcaatggtgctgtt
ggtccagctggtcccgctggcaaccctggtaacaatggtctggctggtgccaaaggtgct
actggcgcccctggtattgctggtgcccctggtttaggtggagcacgcggtggccctgga
ccacaaggattaactggagctgctggagctagaggtctgggtggtgatcctggtgcagtt
ggttccaagggagactctggtattaagggagagcctggtagtcatgggccacagggcccc
ctcggccctgctggtgaggaaggcaaacgtggccctactggagaggtcggcccaacaggg
cccattggcagccgtggagagagaggtgttcctggtgctcgtggtcttcctggggttgag
ggtagagctggtcccatgggtatgcccggtgcccggggggctactggcagcggtggccct
cgcgggccccctggtgatgcaggccgtgctggagagcctggtgccgttggcccaagaggt
cttcctggcagttctggagtcggaggtcccccaggaaaggaaggtcccatgggtgcccct
ggtgctgacggtcgcaccggccctgctggtgctactggagccagaggtctggctggtacc
attggtttccccggtcccaagggccctggtggtgctccaggaaaggctggtgacaaaggt
gcaactggcccagctggcttaagaggcgcccccggacctgatggcaataacggacctgct
ggcgcaattggagctgttggtaacacaggagcaaggggagaatcaggtcctgctggttct
gttggtttccagggtctccctggcccagttggaggtgttggtgaggctggaagacctggc
aacaggggtattcctggtgagacgggacaacatggccctgctggtgccaagggagagcgt
ggtaaccctggtcctgctggagcaactggctctcagggccccattggagctcgtggtgcc
actggaccccccggagtcgatggaggagcaggtgatgctggtatcgttggactcgctggt
aatgctgggccccaaggagcctccggaatgcacggcgagcgcggtgcagccggcacccct
ggaggtaaaggcgagaagggtgaggctggacacagagggcctgagggtaaccttggcaga
gatggtgctcgtggcgctgctggccccagtggaccccccggaccttctggtgccaatggt
gataagggtgaaactggtgctgctggagcacatggtcctgctggtcctcgtggttcacct
ggcgagcgtggtgaacgcggtcctcttggagcttctggatttgctggtgcccctggtagc
aatggccagaccggtgtcagaggagagaaaggtcccggtggcgctaagggagaagtgggc
gctgttggtcctgctggccctgccggaagctctggaccttctggcccatccggtcctggt
ggacccccaggtgcccgtggtgataccggtccccatggtctgactggattcccaggccct
gctggacgatctggacttcctggcccagctggcattgttggacccgctggtcacatgggc
gccgctggcaaggatggcccccgtggtgctcgtggtgaccccggccccggcggtccccag
ggctctgtgggtatggttggacctcagggtgttgcaggagagaaaggagctgctggacag
gccggtgccacaggtcccgctggttcccctggaccccagggtgtgctcggttctcagggc
tttgttggtcttcctggcacaagaggtgaacgtggtcttcccggtggtgctggagttgtg
ggtgagcccggtaggggaggcccatctggacaaactggccctcgtggtcctgctggaaac
atcggcatgcctggtatgactggtgctcctggagatgctggccgtgagggtagccctggc
aacgatggtccacctggccgacctggtgctgctgggatcaagggtgatcgtggagagcct
ggatctcatggtgttgtcggctcaactggaagtcctggagctgtgggccccactggttcc
atgggcagacctggcaaccgtggagagcctggtgcagttggccctgctggagctgttggc
gccgctggtgccacaggtgcaattggcgctggtggtctccgtggtgagaagggtgttggc
ggagacaagggagacagagggatgaagggactgcgtggattcccgggaatgcagggaatg
aacgggcctgctggtgttcctggtgagacaggtgctgcaggttctgctggcccctccggt
cccagaggcccagttggtccccatggtccccacggaaaggacggcagagctggccctcat
ggtccctctggacctgttggccaccgtggtccagctggtcacatgggccctgctggcccc
cctggatcccctggtgtccctggccctcctggtcccgcaggcggcagctatgaatttggc
ggttatgatgagtacagagctgaccagggagccctcagagctaaggactacgaggttgat
gccactatcaagtctctgaacacccagatcgatagcattctctccccagaaggctcaagg
aagaaccccgcccgtacctgccgtgacatcaggctcggacacccagaatggaccaatgga
ttttactggatcgatcccaatgagggctgtatcagcgacgctattcaggcctactgcgac
ttctccaccggagagacctgcatccacgccaagcccgccagcatcgaccgcaagaactgg
tacaagagcaccgagaagagccatgtcttctttggggagaccatcaacggtggctcagag
ttcacatacaacgatgacaccattagcactcagtctatggctacacaactggccttcatg
cgtctgctggccaaccgtgcctcccagaacatcacctaccactgcaagaacagcatcgcc
tacatggatgccgagggcggtgacctgaagaaggccgttcggctgatgggctccaacgat
gtggaactgagggccgagggcaacagccgcttcacctacaacgtgctggaggatgggtgc
actaggcacactggccagtgggccaagacagtcatcgagtacagaacgacgaaaccaacc
cgcctcccaatcctggacatcgcaccattggacatcggaggagacgatcaggaatttggt
ttggacattggcccagtctgtttcaaatga
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